RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 A0A1B0GVI7 797 aa8.83□□□□□ -1
SRP54-208ENST00000555557 CASKO14936 926 aa8.83□□□□□ -1
SRP54-208ENST00000555557 UCHL1P09936 223 aa8.83□□□□□ -1
SRP54-208ENST00000555557 CECR9P0C854 216 aa8.83□□□□□ -1
SRP54-208ENST00000555557 EPXP11678 715 aa8.83□□□□□ -1
SRP54-208ENST00000555557 GRNP28799 593 aaKnown RBP8.83□□□□□ -1
SRP54-208ENST00000555557 PPA1Q15181 289 aa8.83□□□□□ -1
SRP54-208ENST00000555557 TBC1D28Q2M2D7 210 aa8.83□□□□□ -1
SRP54-208ENST00000555557 ASPHD2Q6ICH7 369 aa8.83□□□□□ -1
SRP54-208ENST00000555557 COLCA1Q6ZS62 124 aa8.83□□□□□ -1
SRP54-208ENST00000555557 OR52H1Q8NGJ2 320 aa8.83□□□□□ -1
SRP54-208ENST00000555557 LILRB4Q8NHJ6 448 aa8.83□□□□□ -1
SRP54-208ENST00000555557 DYNC2LI1Q8TCX1 351 aa8.83□□□□□ -1
SRP54-208ENST00000555557 CA5BP1Q8WTZ4 195 aa8.83□□□□□ -1
SRP54-208ENST00000555557 FGGYQ96C11 551 aa8.83□□□□□ -1
SRP54-208ENST00000555557 ITPKCQ96DU7 683 aa8.83□□□□□ -1
SRP54-208ENST00000555557 REEP6Q96HR9 211 aa8.83□□□□□ -1
SRP54-208ENST00000555557 POFUT1Q9H488 388 aa8.83□□□□□ -1
SRP54-208ENST00000555557 OBP2BQ9NPH6 170 aa8.83□□□□□ -1
SRP54-208ENST00000555557 STARD10Q9Y365 291 aa8.83□□□□□ -1
SRP54-208ENST00000555557 TRAV8-7A0A075B6U6 113 aa8.82□□□□□ -1
SRP54-208ENST00000555557 A0A0U1RQV5 110 aa8.82□□□□□ -1
SRP54-208ENST00000555557 PYCARD-AS1I3L0S3 204 aa8.82□□□□□ -1
SRP54-208ENST00000555557 M0R1B8 84 aa8.82□□□□□ -1
SRP54-208ENST00000555557 MAGEB3O15480 346 aa8.82□□□□□ -1
SRP54-208ENST00000555557 ZG16O60844 167 aa8.82□□□□□ -1
SRP54-208ENST00000555557 IGLV1-44P01699 117 aa8.82□□□□□ -1
SRP54-208ENST00000555557 IGLV3-1P01715 115 aa8.82□□□□□ -1
SRP54-208ENST00000555557 FAM157BP0CG42 384 aa8.82□□□□□ -1
SRP54-208ENST00000555557 SRMP19623 302 aa8.82□□□□□ -1
SRP54-208ENST00000555557 ASCL1P50553 236 aa8.82□□□□□ -1
SRP54-208ENST00000555557 ZNF92Q03936 586 aa8.82□□□□□ -1
SRP54-208ENST00000555557 HLXQ14774 488 aaPredicted RBP8.82□□□□□ -1
SRP54-208ENST00000555557 SLC25A35Q3KQZ1 300 aa8.82□□□□□ -1
SRP54-208ENST00000555557 C4orf17Q53FE4 359 aa8.82□□□□□ -1
SRP54-208ENST00000555557 HSD17B12Q53GQ0 312 aa8.82□□□□□ -1
SRP54-208ENST00000555557 DMRTC1Q5HYR2 192 aa8.82□□□□□ -1
SRP54-208ENST00000555557 NR2C2APQ86WQ0 139 aa8.82□□□□□ -1
SRP54-208ENST00000555557 KBTBD8Q8NFY9 601 aa8.82□□□□□ -1
SRP54-208ENST00000555557 OR1J2Q8NGS2 313 aa8.82□□□□□ -1
SRP54-208ENST00000555557 ADAT3Q96EY9 351 aaPredicted RBP8.82□□□□□ -1
SRP54-208ENST00000555557 HIVEP3Q5T1R4 2406 aa8.82□□□□□ -1
SRP54-208ENST00000555557 TRBV5-7A0A0A0MS05 114 aa8.82□□□□□ -1
SRP54-208ENST00000555557 ARL6IP5O75915 188 aa8.82□□□□□ -1
SRP54-208ENST00000555557 MAS1P04201 325 aa8.82□□□□□ -1
SRP54-208ENST00000555557 MYL9P24844 172 aa8.82□□□□□ -1
SRP54-208ENST00000555557 CALCRP30988 508 aa8.82□□□□□ -1
SRP54-208ENST00000555557 OR10A3P58181 314 aa8.82□□□□□ -1
SRP54-208ENST00000555557 SPATA46Q5T0L3 261 aa8.82□□□□□ -1
SRP54-208ENST00000555557 PAMR1Q6UXH9 720 aa8.82□□□□□ -1
SRP54-208ENST00000555557 RFPL4BQ6ZWI9 263 aa8.82□□□□□ -1
SRP54-208ENST00000555557 DOK3Q7L591 496 aa8.82□□□□□ -1
SRP54-208ENST00000555557 OR14K1Q8NGZ2 314 aa8.82□□□□□ -1
SRP54-208ENST00000555557 COX4I2Q96KJ9 171 aa8.82□□□□□ -1
SRP54-208ENST00000555557 WFIKKN1Q96NZ8 548 aa8.82□□□□□ -1
SRP54-208ENST00000555557 SLC30A2Q9BRI3 323 aa8.82□□□□□ -1
SRP54-208ENST00000555557 BARHL1Q9BZE3 327 aa8.82□□□□□ -1
SRP54-208ENST00000555557 CDH20Q9HBT6 801 aa8.82□□□□□ -1
SRP54-208ENST00000555557 ZNF275Q9NSD4 429 aaPredicted RBP8.82□□□□□ -1
SRP54-208ENST00000555557 CRNNQ9UBG3 495 aaPredicted RBP8.82□□□□□ -1
SRP54-208ENST00000555557 PMF1-BGLAPU3KQ54 211 aa8.82□□□□□ -1
SRP54-208ENST00000555557 CD2P06729 351 aa8.81□□□□□ -1
SRP54-208ENST00000555557 THBDP07204 575 aa8.81□□□□□ -1
SRP54-208ENST00000555557 ZNF35P13682 527 aa8.81□□□□□ -1
SRP54-208ENST00000555557 CCL1P22362 96 aa8.81□□□□□ -1
SRP54-208ENST00000555557 ACKR3P25106 362 aa8.81□□□□□ -1
SRP54-208ENST00000555557 MAPK3P27361 379 aaPredicted RBP8.81□□□□□ -1
SRP54-208ENST00000555557 GNALP38405 381 aa8.81□□□□□ -1
SRP54-208ENST00000555557 MTNR1BP49286 362 aa8.81□□□□□ -1
SRP54-208ENST00000555557 ERVS71-1P61550 626 aa8.81□□□□□ -1
SRP54-208ENST00000555557 HNRNPA0Q13151 305 aaKnown RBP8.81□□□□□ -1
SRP54-208ENST00000555557 TNK1Q13470 666 aa8.81□□□□□ -1
SRP54-208ENST00000555557 GK2Q14410 553 aaPredicted RBP8.81□□□□□ -1
SRP54-208ENST00000555557 SEZ6L2Q6UXD5 910 aa8.81□□□□□ -1
SRP54-208ENST00000555557 WFDC8Q8IUA0 241 aa8.81□□□□□ -1
SRP54-208ENST00000555557 PLPP7Q8NBV4 271 aa8.81□□□□□ -1
SRP54-208ENST00000555557 DNAAF1Q8NEP3 725 aa8.81□□□□□ -1
SRP54-208ENST00000555557 APOBEC3DQ96AK3 386 aaPredicted RBP8.81□□□□□ -1
SRP54-208ENST00000555557 NKX3-1Q99801 234 aaPredicted RBP8.81□□□□□ -1
SRP54-208ENST00000555557 SP140LQ9H930 580 aa8.81□□□□□ -1
SRP54-208ENST00000555557 TCF7L1Q9HCS4 588 aa8.81□□□□□ -1
SRP54-208ENST00000555557 KCNJ16Q9NPI9 418 aa8.81□□□□□ -1
SRP54-208ENST00000555557 TAS2R4Q9NYW5 299 aa8.81□□□□□ -1
SRP54-208ENST00000555557 PTTG3PQ9NZH4 202 aa8.81□□□□□ -1
SRP54-208ENST00000555557 AK6Q9Y3D8 172 aaKnown RBP8.81□□□□□ -1
SRP54-208ENST00000555557 GCN1Q92616 2671 aaKnown RBP8.81□□□□□ -1
SRP54-208ENST00000555557 BOLA2-SMG1P6H3BVE0 249 aa8.8□□□□□ -1
SRP54-208ENST00000555557 SMPD2O60906 423 aa8.8□□□□□ -1
SRP54-208ENST00000555557 DHRS3O75911 302 aa8.8□□□□□ -1
SRP54-208ENST00000555557 IL1AP01583 271 aa8.8□□□□□ -1
SRP54-208ENST00000555557 FAHP16930 419 aa8.8□□□□□ -1
SRP54-208ENST00000555557 UCP2P55851 309 aa8.8□□□□□ -1
SRP54-208ENST00000555557 FAM3AP98173 230 aa8.8□□□□□ -1
SRP54-208ENST00000555557 CEP78Q5JTW2 689 aa8.8□□□□□ -1
SRP54-208ENST00000555557 OR51A2Q8NGJ7 313 aa8.8□□□□□ -1
SRP54-208ENST00000555557 LINC01560Q8TB33 94 aa8.8□□□□□ -1
SRP54-208ENST00000555557 PHYHIPQ92561 330 aa8.8□□□□□ -1
SRP54-208ENST00000555557 RNASE6Q93091 150 aaKnown RBP8.8□□□□□ -1
SRP54-208ENST00000555557 SLC25A46Q96AG3 418 aa8.8□□□□□ -1
SRP54-208ENST00000555557 GFI1Q99684 422 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms