RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 HSD11B1P28845 292 aa11.5□□□□□ -0.57
SNX6-203ENST00000555416 DVL1P1P54792 670 aaPredicted RBP11.5□□□□□ -0.57
SNX6-203ENST00000555416 FAM3AP98173 230 aa11.5□□□□□ -0.57
SNX6-203ENST00000555416 MPPED2Q15777 294 aa11.5□□□□□ -0.57
SNX6-203ENST00000555416 LCE2DQ5TA82 110 aaPredicted RBP11.5□□□□□ -0.57
SNX6-203ENST00000555416 MEPCEQ7L2J0 689 aaKnown RBP11.5□□□□□ -0.57
SNX6-203ENST00000555416 ZNF454Q8N9F8 522 aa11.5□□□□□ -0.57
SNX6-203ENST00000555416 UBE2FQ969M7 185 aa11.5□□□□□ -0.57
SNX6-203ENST00000555416 TIMD4Q96H15 378 aa11.5□□□□□ -0.57
SNX6-203ENST00000555416 REEP6Q96HR9 211 aa11.5□□□□□ -0.57
SNX6-203ENST00000555416 LYZL4Q96KX0 146 aa11.5□□□□□ -0.57
SNX6-203ENST00000555416 GAL3ST1Q99999 423 aa11.5□□□□□ -0.57
SNX6-203ENST00000555416 TEX12Q9BXU0 123 aa11.5□□□□□ -0.57
SNX6-203ENST00000555416 BEX2Q9BXY8 128 aa11.5□□□□□ -0.57
SNX6-203ENST00000555416 GABARAPL3Q9BY60 117 aa11.5□□□□□ -0.57
SNX6-203ENST00000555416 SHARPINQ9H0F6 387 aa11.5□□□□□ -0.57
SNX6-203ENST00000555416 TOR3AQ9H497 397 aa11.5□□□□□ -0.57
SNX6-203ENST00000555416 RIBC2Q9H4K1 309 aa11.5□□□□□ -0.57
SNX6-203ENST00000555416 HIF1ANQ9NWT6 349 aa11.5□□□□□ -0.57
SNX6-203ENST00000555416 UBAP1Q9NZ09 502 aa11.5□□□□□ -0.57
SNX6-203ENST00000555416 LRP12Q9Y561 859 aa11.5□□□□□ -0.57
SNX6-203ENST00000555416 ATRQ13535 2644 aa11.5□□□□□ -0.57
SNX6-203ENST00000555416 hCG_38984A0A1B0GV85 526 aa11.49□□□□□ -0.57
SNX6-203ENST00000555416 EI24O14681 340 aa11.49□□□□□ -0.57
SNX6-203ENST00000555416 XRCC2O43543 280 aa11.49□□□□□ -0.57
SNX6-203ENST00000555416 ALPLP05186 524 aa11.49□□□□□ -0.57
SNX6-203ENST00000555416 FAM157CP0CG43 387 aa11.49□□□□□ -0.57
SNX6-203ENST00000555416 ZFP36P26651 326 aaKnown RBP11.49□□□□□ -0.57
SNX6-203ENST00000555416 SRP9P49458 86 aaKnown RBP11.49□□□□□ -0.57
SNX6-203ENST00000555416 RAD23AP54725 363 aa11.49□□□□□ -0.57
SNX6-203ENST00000555416 SEC61A1P61619 476 aaKnown RBP11.49□□□□□ -0.57
SNX6-203ENST00000555416 SLC3A1Q07837 685 aa11.49□□□□□ -0.57
SNX6-203ENST00000555416 GFOD2Q3B7J2 385 aa11.49□□□□□ -0.57
SNX6-203ENST00000555416 C1orf229Q6ZS94 237 aaPredicted RBP11.49□□□□□ -0.57
SNX6-203ENST00000555416 RHOUQ7L0Q8 258 aa11.49□□□□□ -0.57
SNX6-203ENST00000555416 LRRC28Q86X40 367 aaPredicted RBP11.49□□□□□ -0.57
SNX6-203ENST00000555416 PPP1R14AQ96A00 147 aa11.49□□□□□ -0.57
SNX6-203ENST00000555416 TMEM186Q96B77 213 aa11.49□□□□□ -0.57
SNX6-203ENST00000555416 MDFIQ99750 246 aa11.49□□□□□ -0.57
SNX6-203ENST00000555416 YIPF3Q9GZM5 350 aa11.49□□□□□ -0.57
SNX6-203ENST00000555416 ADGRL4Q9HBW9 690 aa11.49□□□□□ -0.57
SNX6-203ENST00000555416 UFSP2Q9NUQ7 469 aa11.49□□□□□ -0.57
SNX6-203ENST00000555416 LAMP5Q9UJQ1 280 aa11.49□□□□□ -0.57
SNX6-203ENST00000555416 E9PQ18 207 aa11.48□□□□□ -0.57
SNX6-203ENST00000555416 FAM20BO75063 409 aa11.48□□□□□ -0.57
SNX6-203ENST00000555416 AVPP01185 164 aa11.48□□□□□ -0.57
SNX6-203ENST00000555416 ACKR3P25106 362 aa11.48□□□□□ -0.57
SNX6-203ENST00000555416 CD200P41217 278 aa11.48□□□□□ -0.57
SNX6-203ENST00000555416 GSK3AP49840 483 aa11.48□□□□□ -0.57
SNX6-203ENST00000555416 BTG1P62324 171 aa11.48□□□□□ -0.57
SNX6-203ENST00000555416 OR8G1Q15617 311 aa11.48□□□□□ -0.57
SNX6-203ENST00000555416 ZIK1Q3SY52 487 aaPredicted RBP11.48□□□□□ -0.57
SNX6-203ENST00000555416 NXNL2Q5VZ03 156 aa11.48□□□□□ -0.57
SNX6-203ENST00000555416 ZFP1Q6P2D0 407 aa11.48□□□□□ -0.57
SNX6-203ENST00000555416 WDR86Q86TI4 376 aa11.48□□□□□ -0.57
SNX6-203ENST00000555416 GLCCI1Q86VQ1 547 aa11.48□□□□□ -0.57
SNX6-203ENST00000555416 C19orf18Q8NEA5 215 aa11.48□□□□□ -0.57
SNX6-203ENST00000555416 OR8B12Q8NGG6 310 aa11.48□□□□□ -0.57
SNX6-203ENST00000555416 PGAM5Q96HS1 289 aa11.48□□□□□ -0.57
SNX6-203ENST00000555416 RBM4BQ9BQ04 359 aaKnown RBP11.48□□□□□ -0.57
SNX6-203ENST00000555416 ADAT1Q9BUB4 502 aaKnown RBP11.48□□□□□ -0.57
SNX6-203ENST00000555416 S100A14Q9HCY8 104 aa11.48□□□□□ -0.57
SNX6-203ENST00000555416 G6PC2Q9NQR9 355 aa11.48□□□□□ -0.57
SNX6-203ENST00000555416 C3orf80F5H4A9 247 aa11.47□□□□□ -0.57
SNX6-203ENST00000555416 APOL3O95236 402 aa11.47□□□□□ -0.57
SNX6-203ENST00000555416 PTBP3O95758 552 aaKnown RBP11.47□□□□□ -0.57
SNX6-203ENST00000555416 GATA4P43694 442 aa11.47□□□□□ -0.57
SNX6-203ENST00000555416 PSMA6P60900 246 aaKnown RBP11.47□□□□□ -0.57
SNX6-203ENST00000555416 LCN2P80188 198 aa11.47□□□□□ -0.57
SNX6-203ENST00000555416 SRSF2Q01130 221 aaKnown RBP11.47□□□□□ -0.57
SNX6-203ENST00000555416 ROM1Q03395 351 aa11.47□□□□□ -0.57
SNX6-203ENST00000555416 MFGE8Q08431 387 aaPredicted RBP11.47□□□□□ -0.57
SNX6-203ENST00000555416 TIGD6Q17RP2 521 aa11.47□□□□□ -0.57
SNX6-203ENST00000555416 LCN1P1Q5VSP4 162 aa11.47□□□□□ -0.57
SNX6-203ENST00000555416 ZNF826PQ6ZT77 177 aa11.47□□□□□ -0.57
SNX6-203ENST00000555416 SSX6Q7RTT6 188 aa11.47□□□□□ -0.57
SNX6-203ENST00000555416 KRT77Q7Z794 578 aa11.47□□□□□ -0.57
SNX6-203ENST00000555416 PEG10Q86TG7 708 aaKnown RBP11.47□□□□□ -0.57
SNX6-203ENST00000555416 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.47□□□□□ -0.57
SNX6-203ENST00000555416 CBR4Q8N4T8 237 aa11.47□□□□□ -0.57
SNX6-203ENST00000555416 CELF2-AS1Q8N7Q2 184 aa11.47□□□□□ -0.57
SNX6-203ENST00000555416 OR51F2Q8NH61 342 aa11.47□□□□□ -0.57
SNX6-203ENST00000555416 RAB39BQ96DA2 213 aa11.47□□□□□ -0.57
SNX6-203ENST00000555416 OR8B4Q96RC9 309 aa11.47□□□□□ -0.57
SNX6-203ENST00000555416 MBOAT4Q96T53 435 aa11.47□□□□□ -0.57
SNX6-203ENST00000555416 CNN2Q99439 309 aaKnown RBP11.47□□□□□ -0.57
SNX6-203ENST00000555416 SLC29A1Q99808 456 aa11.47□□□□□ -0.57
SNX6-203ENST00000555416 APOL4Q9BPW4 351 aa11.47□□□□□ -0.57
SNX6-203ENST00000555416 FGF23Q9GZV9 251 aaPredicted RBP11.47□□□□□ -0.57
SNX6-203ENST00000555416 OR10A2Q9H208 303 aa11.47□□□□□ -0.57
SNX6-203ENST00000555416 TMEM165Q9HC07 324 aa11.47□□□□□ -0.57
SNX6-203ENST00000555416 FAM206AQ9NX38 181 aa11.47□□□□□ -0.57
SNX6-203ENST00000555416 USE1Q9NZ43 259 aa11.47□□□□□ -0.57
SNX6-203ENST00000555416 MRPL15Q9P015 296 aaKnown RBP11.47□□□□□ -0.57
SNX6-203ENST00000555416 LPAR3Q9UBY5 353 aa11.47□□□□□ -0.57
SNX6-203ENST00000555416 AASSQ9UDR5 926 aa11.47□□□□□ -0.57
SNX6-203ENST00000555416 RHBDD3Q9Y3P4 386 aa11.47□□□□□ -0.57
SNX6-203ENST00000555416 CEACAM18A8MTB9 384 aa11.46□□□□□ -0.57
SNX6-203ENST00000555416 F5H0A9 414 aaPredicted RBP11.46□□□□□ -0.57
SNX6-203ENST00000555416 GMDSO60547 372 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms