RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 PAMR1Q6UXH9 720 aa10.85□□□□□ -0.67
SYNE2-219ENST00000555323 PRSS35Q8N3Z0 413 aa10.85□□□□□ -0.67
SYNE2-219ENST00000555323 OR2AE1Q8NHA4 323 aa10.85□□□□□ -0.67
SYNE2-219ENST00000555323 GATAD2BQ8WXI9 593 aa10.85□□□□□ -0.67
SYNE2-219ENST00000555323 PIGTQ969N2 578 aa10.85□□□□□ -0.67
SYNE2-219ENST00000555323 REEP6Q96HR9 211 aa10.85□□□□□ -0.67
SYNE2-219ENST00000555323 LYZL4Q96KX0 146 aa10.85□□□□□ -0.67
SYNE2-219ENST00000555323 LURAP1Q96LR2 239 aa10.85□□□□□ -0.67
SYNE2-219ENST00000555323 SYT3Q9BQG1 590 aa10.85□□□□□ -0.67
SYNE2-219ENST00000555323 MS4A5Q9H3V2 200 aa10.85□□□□□ -0.67
SYNE2-219ENST00000555323 MYEF2Q9P2K5 600 aaKnown RBP10.85□□□□□ -0.67
SYNE2-219ENST00000555323 CGGBP1Q9UFW8 167 aaPredicted RBP10.85□□□□□ -0.67
SYNE2-219ENST00000555323 FZR1Q9UM11 496 aa10.85□□□□□ -0.67
SYNE2-219ENST00000555323 LAMP3Q9UQV4 416 aa10.85□□□□□ -0.67
SYNE2-219ENST00000555323 N6AMT1Q9Y5N5 214 aa10.85□□□□□ -0.67
SYNE2-219ENST00000555323 FBN2P35556 2912 aa10.85□□□□□ -0.67
SYNE2-219ENST00000555323 A0A1B0GTI1 187 aa10.84□□□□□ -0.67
SYNE2-219ENST00000555323 hCG_38984A0A1B0GV85 526 aa10.84□□□□□ -0.67
SYNE2-219ENST00000555323 OR4C45A6NMZ5 311 aa10.84□□□□□ -0.67
SYNE2-219ENST00000555323 E9PI62 339 aa10.84□□□□□ -0.67
SYNE2-219ENST00000555323 RAF1P04049 648 aa10.84□□□□□ -0.67
SYNE2-219ENST00000555323 RPSAP08865 295 aaKnown RBP10.84□□□□□ -0.67
SYNE2-219ENST00000555323 ATP6V1B1P15313 513 aa10.84□□□□□ -0.67
SYNE2-219ENST00000555323 CCL1P22362 96 aa10.84□□□□□ -0.67
SYNE2-219ENST00000555323 WNT4P56705 351 aa10.84□□□□□ -0.67
SYNE2-219ENST00000555323 BDH1Q02338 343 aa10.84□□□□□ -0.67
SYNE2-219ENST00000555323 TNK1Q13470 666 aa10.84□□□□□ -0.67
SYNE2-219ENST00000555323 OR8B8Q15620 311 aa10.84□□□□□ -0.67
SYNE2-219ENST00000555323 TIGD6Q17RP2 521 aa10.84□□□□□ -0.67
SYNE2-219ENST00000555323 ALKBH6Q3KRA9 238 aa10.84□□□□□ -0.67
SYNE2-219ENST00000555323 KCTD21Q4G0X4 260 aa10.84□□□□□ -0.67
SYNE2-219ENST00000555323 BCL2L15Q5TBC7 163 aa10.84□□□□□ -0.67
SYNE2-219ENST00000555323 RPL22L1Q6P5R6 122 aaKnown RBP10.84□□□□□ -0.67
SYNE2-219ENST00000555323 MRPL21Q7Z2W9 205 aaKnown RBP10.84□□□□□ -0.67
SYNE2-219ENST00000555323 CCDC54Q8NEL0 328 aa10.84□□□□□ -0.67
SYNE2-219ENST00000555323 NRGNQ92686 78 aa10.84□□□□□ -0.67
SYNE2-219ENST00000555323 NINJ1Q92982 152 aa10.84□□□□□ -0.67
SYNE2-219ENST00000555323 MND1Q9BWT6 205 aa10.84□□□□□ -0.67
SYNE2-219ENST00000555323 CYSLTR2Q9NS75 346 aa10.84□□□□□ -0.67
SYNE2-219ENST00000555323 TAAR3PQ9P1P4 343 aa10.84□□□□□ -0.67
SYNE2-219ENST00000555323 ST6GALNAC2Q9UJ37 374 aa10.84□□□□□ -0.67
SYNE2-219ENST00000555323 GPR160Q9UJ42 338 aa10.84□□□□□ -0.67
SYNE2-219ENST00000555323 SLC22A13Q9Y226 551 aa10.84□□□□□ -0.67
SYNE2-219ENST00000555323 LSM2Q9Y333 95 aaKnown RBP10.84□□□□□ -0.67
SYNE2-219ENST00000555323 HECTD1Q9ULT8 2610 aa10.84□□□□□ -0.67
SYNE2-219ENST00000555323 DHRS7CA6NNS2 312 aa10.83□□□□□ -0.68
SYNE2-219ENST00000555323 CD300LBA8K4G0 201 aa10.83□□□□□ -0.68
SYNE2-219ENST00000555323 H7C417 338 aa10.83□□□□□ -0.68
SYNE2-219ENST00000555323 MYL12BO14950 172 aa10.83□□□□□ -0.68
SYNE2-219ENST00000555323 LALBAP00709 142 aa10.83□□□□□ -0.68
SYNE2-219ENST00000555323 MT-ND2P03891 347 aa10.83□□□□□ -0.68
SYNE2-219ENST00000555323 CD1AP06126 327 aa10.83□□□□□ -0.68
SYNE2-219ENST00000555323 ADH4P08319 380 aa10.83□□□□□ -0.68
SYNE2-219ENST00000555323 EEF1B2P24534 225 aaKnown RBP10.83□□□□□ -0.68
SYNE2-219ENST00000555323 KIR3DL2P43630 455 aa10.83□□□□□ -0.68
SYNE2-219ENST00000555323 GSK3AP49840 483 aa10.83□□□□□ -0.68
SYNE2-219ENST00000555323 PPOXP50336 477 aa10.83□□□□□ -0.68
SYNE2-219ENST00000555323 GTF2A1P52655 376 aaPredicted RBP10.83□□□□□ -0.68
SYNE2-219ENST00000555323 CHN2P52757 468 aa10.83□□□□□ -0.68
SYNE2-219ENST00000555323 SNRPD2P62316 118 aaKnown RBP10.83□□□□□ -0.68
SYNE2-219ENST00000555323 SPHARQ15513 63 aa10.83□□□□□ -0.68
SYNE2-219ENST00000555323 TMEM244Q5VVB8 128 aa10.83□□□□□ -0.68
SYNE2-219ENST00000555323 XAF1Q6GPH4 301 aa10.83□□□□□ -0.68
SYNE2-219ENST00000555323 OR2T2Q6IF00 324 aa10.83□□□□□ -0.68
SYNE2-219ENST00000555323 KLBQ86Z14 1044 aa10.83□□□□□ -0.68
SYNE2-219ENST00000555323 OR8G5Q8NG78 346 aa10.83□□□□□ -0.68
SYNE2-219ENST00000555323 OR51E1Q8TCB6 317 aa10.83□□□□□ -0.68
SYNE2-219ENST00000555323 MBD6Q96DN6 1003 aa10.83□□□□□ -0.68
SYNE2-219ENST00000555323 SLC30A2Q9BRI3 323 aa10.83□□□□□ -0.68
SYNE2-219ENST00000555323 SOX7Q9BT81 388 aa10.83□□□□□ -0.68
SYNE2-219ENST00000555323 TRIM36Q9NQ86 728 aa10.83□□□□□ -0.68
SYNE2-219ENST00000555323 GPR84Q9NQS5 396 aa10.83□□□□□ -0.68
SYNE2-219ENST00000555323 ZNF701Q9NV72 531 aaPredicted RBP10.83□□□□□ -0.68
SYNE2-219ENST00000555323 PMF1-BGLAPU3KQ54 211 aa10.83□□□□□ -0.68
SYNE2-219ENST00000555323 CACNA1DQ01668 2161 aa10.82□□□□□ -0.68
SYNE2-219ENST00000555323 GGT3PA6NGU5 568 aa10.82□□□□□ -0.68
SYNE2-219ENST00000555323 TMEM212A6NML5 194 aa10.82□□□□□ -0.68
SYNE2-219ENST00000555323 C17orf100A8MU93 164 aa10.82□□□□□ -0.68
SYNE2-219ENST00000555323 M0R233 179 aa10.82□□□□□ -0.68
SYNE2-219ENST00000555323 PLPP2O43688 288 aa10.82□□□□□ -0.68
SYNE2-219ENST00000555323 TIMM8AO60220 97 aaPredicted RBP10.82□□□□□ -0.68
SYNE2-219ENST00000555323 MTRF1O75570 445 aaKnown RBP10.82□□□□□ -0.68
SYNE2-219ENST00000555323 DHRS3O75911 302 aa10.82□□□□□ -0.68
SYNE2-219ENST00000555323 ZFPL1O95159 310 aa10.82□□□□□ -0.68
SYNE2-219ENST00000555323 UBCP0CG48 685 aaKnown RBP10.82□□□□□ -0.68
SYNE2-219ENST00000555323 TAS2R43P59537 309 aa10.82□□□□□ -0.68
SYNE2-219ENST00000555323 EMX1Q04741 257 aaPredicted RBP10.82□□□□□ -0.68
SYNE2-219ENST00000555323 DOC2BQ14184 412 aa10.82□□□□□ -0.68
SYNE2-219ENST00000555323 CDK5R1Q15078 307 aa10.82□□□□□ -0.68
SYNE2-219ENST00000555323 TBCEQ15813 527 aaPredicted RBP10.82□□□□□ -0.68
SYNE2-219ENST00000555323 ZBTB37Q5TC79 503 aa10.82□□□□□ -0.68
SYNE2-219ENST00000555323 DMKNQ6E0U4 476 aaPredicted RBP10.82□□□□□ -0.68
SYNE2-219ENST00000555323 DOK3Q7L591 496 aa10.82□□□□□ -0.68
SYNE2-219ENST00000555323 SPARTQ8N0X7 666 aa10.82□□□□□ -0.68
SYNE2-219ENST00000555323 CSNK2A3Q8NEV1 391 aa10.82□□□□□ -0.68
SYNE2-219ENST00000555323 OR14K1Q8NGZ2 314 aa10.82□□□□□ -0.68
SYNE2-219ENST00000555323 OR5M11Q96RB7 305 aa10.82□□□□□ -0.68
SYNE2-219ENST00000555323 CCL19Q99731 98 aa10.82□□□□□ -0.68
SYNE2-219ENST00000555323 CCDC90BQ9GZT6 254 aa10.82□□□□□ -0.68
SYNE2-219ENST00000555323 SLC22A4Q9H015 551 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms