RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 LIME1Q9H400 295 aa12.23□□□□□ -0.45
CHD8-208ENST00000555301 DYNLRB1Q9NP97 96 aa12.23□□□□□ -0.45
CHD8-208ENST00000555301 TRIM36Q9NQ86 728 aa12.23□□□□□ -0.45
CHD8-208ENST00000555301 ST6GALNAC2Q9UJ37 374 aa12.23□□□□□ -0.45
CHD8-208ENST00000555301 HECTD1Q9ULT8 2610 aa12.23□□□□□ -0.45
CHD8-208ENST00000555301 hCG_38984A0A1B0GV85 526 aa12.22□□□□□ -0.45
CHD8-208ENST00000555301 IQCF6A8MYZ5 107 aa12.22□□□□□ -0.45
CHD8-208ENST00000555301 MTRF1O75570 445 aaKnown RBP12.22□□□□□ -0.45
CHD8-208ENST00000555301 IGLV3-1P01715 115 aa12.22□□□□□ -0.45
CHD8-208ENST00000555301 MT-ND2P03891 347 aa12.22□□□□□ -0.45
CHD8-208ENST00000555301 ATP6V1B1P15313 513 aa12.22□□□□□ -0.45
CHD8-208ENST00000555301 DNASE1P24855 282 aa12.22□□□□□ -0.45
CHD8-208ENST00000555301 PPOXP50336 477 aa12.22□□□□□ -0.45
CHD8-208ENST00000555301 CHN2P52757 468 aa12.22□□□□□ -0.45
CHD8-208ENST00000555301 TAS2R43P59537 309 aa12.22□□□□□ -0.45
CHD8-208ENST00000555301 FAM3AP98173 230 aa12.22□□□□□ -0.45
CHD8-208ENST00000555301 ALKBH1Q13686 389 aaKnown RBP12.22□□□□□ -0.45
CHD8-208ENST00000555301 IRF3Q14653 427 aa12.22□□□□□ -0.45
CHD8-208ENST00000555301 KCTD21Q4G0X4 260 aa12.22□□□□□ -0.45
CHD8-208ENST00000555301 OR2T2Q6IF00 324 aa12.22□□□□□ -0.45
CHD8-208ENST00000555301 RPL22L1Q6P5R6 122 aaKnown RBP12.22□□□□□ -0.45
CHD8-208ENST00000555301 KLBQ86Z14 1044 aa12.22□□□□□ -0.45
CHD8-208ENST00000555301 PRSS35Q8N3Z0 413 aa12.22□□□□□ -0.45
CHD8-208ENST00000555301 FTMTQ8N4E7 242 aa12.22□□□□□ -0.45
CHD8-208ENST00000555301 ZNF485Q8NCK3 441 aa12.22□□□□□ -0.45
CHD8-208ENST00000555301 CCDC54Q8NEL0 328 aa12.22□□□□□ -0.45
CHD8-208ENST00000555301 OR51E1Q8TCB6 317 aa12.22□□□□□ -0.45
CHD8-208ENST00000555301 IGFBPL1Q8WX77 278 aa12.22□□□□□ -0.45
CHD8-208ENST00000555301 NRGNQ92686 78 aa12.22□□□□□ -0.45
CHD8-208ENST00000555301 NINJ1Q92982 152 aa12.22□□□□□ -0.45
CHD8-208ENST00000555301 PPP1R14AQ96A00 147 aa12.22□□□□□ -0.45
CHD8-208ENST00000555301 RNF166Q96A37 237 aaPredicted RBP12.22□□□□□ -0.45
CHD8-208ENST00000555301 FRRS1LQ9P0K9 344 aa12.22□□□□□ -0.45
CHD8-208ENST00000555301 MYEF2Q9P2K5 600 aaKnown RBP12.22□□□□□ -0.45
CHD8-208ENST00000555301 SLC22A13Q9Y226 551 aa12.22□□□□□ -0.45
CHD8-208ENST00000555301 BAHCC1Q9P281 2608 aa12.21□□□□□ -0.45
CHD8-208ENST00000555301 NBPF19A0A087WUL8 3843 aa12.21□□□□□ -0.45
CHD8-208ENST00000555301 LOC390937A0A1W2PQ73 354 aa12.21□□□□□ -0.45
CHD8-208ENST00000555301 CD300LBA8K4G0 201 aa12.21□□□□□ -0.45
CHD8-208ENST00000555301 E9PI62 339 aa12.21□□□□□ -0.45
CHD8-208ENST00000555301 H7C417 338 aa12.21□□□□□ -0.45
CHD8-208ENST00000555301 OVOL3O00110 214 aa12.21□□□□□ -0.45
CHD8-208ENST00000555301 TNFAIP8O95379 198 aa12.21□□□□□ -0.45
CHD8-208ENST00000555301 CD53P19397 219 aa12.21□□□□□ -0.45
CHD8-208ENST00000555301 ALDH3B1P43353 468 aa12.21□□□□□ -0.45
CHD8-208ENST00000555301 GSK3AP49840 483 aa12.21□□□□□ -0.45
CHD8-208ENST00000555301 MMP15P51511 669 aa12.21□□□□□ -0.45
CHD8-208ENST00000555301 NANOS3P60323 173 aaKnown RBP12.21□□□□□ -0.45
CHD8-208ENST00000555301 BDH1Q02338 343 aa12.21□□□□□ -0.45
CHD8-208ENST00000555301 SPHARQ15513 63 aa12.21□□□□□ -0.45
CHD8-208ENST00000555301 OR8B8Q15620 311 aa12.21□□□□□ -0.45
CHD8-208ENST00000555301 TMEM244Q5VVB8 128 aa12.21□□□□□ -0.45
CHD8-208ENST00000555301 DOK3Q7L591 496 aa12.21□□□□□ -0.45
CHD8-208ENST00000555301 SVOPQ8N4V2 548 aa12.21□□□□□ -0.45
CHD8-208ENST00000555301 CSNK2A3Q8NEV1 391 aa12.21□□□□□ -0.45
CHD8-208ENST00000555301 OR8G5Q8NG78 346 aa12.21□□□□□ -0.45
CHD8-208ENST00000555301 LYZL4Q96KX0 146 aa12.21□□□□□ -0.45
CHD8-208ENST00000555301 CACNG6Q9BXT2 260 aa12.21□□□□□ -0.45
CHD8-208ENST00000555301 GPR84Q9NQS5 396 aa12.21□□□□□ -0.45
CHD8-208ENST00000555301 PLEKHA6Q9Y2H5 1048 aa12.21□□□□□ -0.45
CHD8-208ENST00000555301 TRBV2A0A0J9YWF9 115 aa12.2□□□□□ -0.46
CHD8-208ENST00000555301 A0A1B0GVI7 797 aa12.2□□□□□ -0.46
CHD8-208ENST00000555301 TMEM212A6NML5 194 aa12.2□□□□□ -0.46
CHD8-208ENST00000555301 P2RY10O00398 339 aa12.2□□□□□ -0.46
CHD8-208ENST00000555301 SYT7O43581 403 aa12.2□□□□□ -0.46
CHD8-208ENST00000555301 DHRS3O75911 302 aa12.2□□□□□ -0.46
CHD8-208ENST00000555301 ISG15P05161 165 aa12.2□□□□□ -0.46
CHD8-208ENST00000555301 ERCC1P07992 297 aaPredicted RBP12.2□□□□□ -0.46
CHD8-208ENST00000555301 ZNF12P17014 697 aa12.2□□□□□ -0.46
CHD8-208ENST00000555301 CCL1P22362 96 aa12.2□□□□□ -0.46
CHD8-208ENST00000555301 KIR3DL2P43630 455 aa12.2□□□□□ -0.46
CHD8-208ENST00000555301 MAP2K3P46734 347 aa12.2□□□□□ -0.46
CHD8-208ENST00000555301 ZNF81P51508 661 aa12.2□□□□□ -0.46
CHD8-208ENST00000555301 GTF2A1P52655 376 aaPredicted RBP12.2□□□□□ -0.46
CHD8-208ENST00000555301 ACSM1Q08AH1 577 aa12.2□□□□□ -0.46
CHD8-208ENST00000555301 CDK5R1Q15078 307 aa12.2□□□□□ -0.46
CHD8-208ENST00000555301 MED22Q15528 200 aa12.2□□□□□ -0.46
CHD8-208ENST00000555301 TBCEQ15813 527 aaPredicted RBP12.2□□□□□ -0.46
CHD8-208ENST00000555301 ODF4Q2M2E3 257 aa12.2□□□□□ -0.46
CHD8-208ENST00000555301 ALKBH6Q3KRA9 238 aa12.2□□□□□ -0.46
CHD8-208ENST00000555301 TMEM255AQ5JRV8 349 aa12.2□□□□□ -0.46
CHD8-208ENST00000555301 OR5AS1Q8N127 324 aa12.2□□□□□ -0.46
CHD8-208ENST00000555301 ZNF676Q8N7Q3 588 aa12.2□□□□□ -0.46
CHD8-208ENST00000555301 PLPP7Q8NBV4 271 aa12.2□□□□□ -0.46
CHD8-208ENST00000555301 BHLHE23Q8NDY6 225 aa12.2□□□□□ -0.46
CHD8-208ENST00000555301 SEMA6DQ8NFY4 1073 aa12.2□□□□□ -0.46
CHD8-208ENST00000555301 OR56B2PQ8NGI1 322 aa12.2□□□□□ -0.46
CHD8-208ENST00000555301 OR13G1Q8NGZ3 307 aa12.2□□□□□ -0.46
CHD8-208ENST00000555301 OR5AK2Q8NH90 309 aa12.2□□□□□ -0.46
CHD8-208ENST00000555301 TRMT61AQ96FX7 289 aaKnown RBP12.2□□□□□ -0.46
CHD8-208ENST00000555301 FAM71F1Q96KD3 344 aaPredicted RBP12.2□□□□□ -0.46
CHD8-208ENST00000555301 DIRC2Q96SL1 478 aa12.2□□□□□ -0.46
CHD8-208ENST00000555301 SLC22A4Q9H015 551 aa12.2□□□□□ -0.46
CHD8-208ENST00000555301 COMMD4Q9H0A8 199 aa12.2□□□□□ -0.46
CHD8-208ENST00000555301 RAB1BQ9H0U4 201 aa12.2□□□□□ -0.46
CHD8-208ENST00000555301 MRPL15Q9P015 296 aaKnown RBP12.2□□□□□ -0.46
CHD8-208ENST00000555301 ZDHHC8Q9ULC8 765 aa12.2□□□□□ -0.46
CHD8-208ENST00000555301 LSM2Q9Y333 95 aaKnown RBP12.2□□□□□ -0.46
CHD8-208ENST00000555301 NOP16Q9Y3C1 178 aaKnown RBP12.2□□□□□ -0.46
CHD8-208ENST00000555301 CADP27708 2225 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms