RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 LRRN1Q6UXK5 716 aa9.04□□□□□ -0.96
TMEM260-206ENST00000555046 FAM57BQ71RH2 274 aa9.04□□□□□ -0.96
TMEM260-206ENST00000555046 NAA40Q86UY6 237 aa9.04□□□□□ -0.96
TMEM260-206ENST00000555046 C8orf59Q8N0T1 100 aaPredicted RBP9.04□□□□□ -0.96
TMEM260-206ENST00000555046 ACBD7Q8N6N7 88 aa9.04□□□□□ -0.96
TMEM260-206ENST00000555046 OR10H4Q8NGA5 316 aa9.04□□□□□ -0.96
TMEM260-206ENST00000555046 HAVCR2Q8TDQ0 301 aa9.04□□□□□ -0.96
TMEM260-206ENST00000555046 SPSB4Q96A44 273 aa9.04□□□□□ -0.96
TMEM260-206ENST00000555046 PIMREGQ9BSJ6 248 aa9.04□□□□□ -0.96
TMEM260-206ENST00000555046 ADI1Q9BV57 179 aa9.04□□□□□ -0.96
TMEM260-206ENST00000555046 MOB1AQ9H8S9 216 aa9.04□□□□□ -0.96
TMEM260-206ENST00000555046 SAP30LQ9HAJ7 183 aa9.04□□□□□ -0.96
TMEM260-206ENST00000555046 MRPS18AQ9NVS2 196 aaKnown RBP9.04□□□□□ -0.96
TMEM260-206ENST00000555046 MRPL15Q9P015 296 aaKnown RBP9.04□□□□□ -0.96
TMEM260-206ENST00000555046 MYEF2Q9P2K5 600 aaKnown RBP9.04□□□□□ -0.96
TMEM260-206ENST00000555046 LRP12Q9Y561 859 aa9.04□□□□□ -0.96
TMEM260-206ENST00000555046 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.03□□□□□ -0.96
TMEM260-206ENST00000555046 A0A1W2PQL4 384 aaPredicted RBP9.03□□□□□ -0.96
TMEM260-206ENST00000555046 ANKRD30BLA7E2S9 258 aa9.03□□□□□ -0.96
TMEM260-206ENST00000555046 CD300LBA8K4G0 201 aa9.03□□□□□ -0.96
TMEM260-206ENST00000555046 DLGAP1O14490 977 aa9.03□□□□□ -0.96
TMEM260-206ENST00000555046 GMDSO60547 372 aa9.03□□□□□ -0.96
TMEM260-206ENST00000555046 NDUFS7O75251 213 aa9.03□□□□□ -0.96
TMEM260-206ENST00000555046 CD55P08174 381 aa9.03□□□□□ -0.96
TMEM260-206ENST00000555046 GABRB1P18505 474 aa9.03□□□□□ -0.96
TMEM260-206ENST00000555046 ACHEP22303 614 aa9.03□□□□□ -0.96
TMEM260-206ENST00000555046 SRP9P49458 86 aaKnown RBP9.03□□□□□ -0.96
TMEM260-206ENST00000555046 PSMA6P60900 246 aaKnown RBP9.03□□□□□ -0.96
TMEM260-206ENST00000555046 ACTA2P62736 377 aa9.03□□□□□ -0.96
TMEM260-206ENST00000555046 ACTG2P63267 376 aa9.03□□□□□ -0.96
TMEM260-206ENST00000555046 ADARB1P78563 741 aaKnown RBP9.03□□□□□ -0.96
TMEM260-206ENST00000555046 CCL8P80075 99 aa9.03□□□□□ -0.96
TMEM260-206ENST00000555046 TNFAIP6P98066 277 aaPredicted RBP9.03□□□□□ -0.96
TMEM260-206ENST00000555046 MRPL28Q13084 256 aaKnown RBP9.03□□□□□ -0.96
TMEM260-206ENST00000555046 HFEQ30201 348 aa9.03□□□□□ -0.96
TMEM260-206ENST00000555046 ALKBH6Q3KRA9 238 aa9.03□□□□□ -0.96
TMEM260-206ENST00000555046 ZNF691Q5VV52 312 aa9.03□□□□□ -0.96
TMEM260-206ENST00000555046 OR2T2Q6IF00 324 aa9.03□□□□□ -0.96
TMEM260-206ENST00000555046 FAM220AQ7Z4H9 259 aa9.03□□□□□ -0.96
TMEM260-206ENST00000555046 PEG10Q86TG7 708 aaKnown RBP9.03□□□□□ -0.96
TMEM260-206ENST00000555046 PHC2Q8IXK0 858 aa9.03□□□□□ -0.96
TMEM260-206ENST00000555046 ZCCHC24Q8N2G6 241 aaKnown RBP9.03□□□□□ -0.96
TMEM260-206ENST00000555046 YIPF7Q8N8F6 280 aa9.03□□□□□ -0.96
TMEM260-206ENST00000555046 CCDC54Q8NEL0 328 aa9.03□□□□□ -0.96
TMEM260-206ENST00000555046 CSNK2A3Q8NEV1 391 aa9.03□□□□□ -0.96
TMEM260-206ENST00000555046 WFDC11Q8NEX6 87 aa9.03□□□□□ -0.96
TMEM260-206ENST00000555046 OR2Z1Q8NG97 314 aa9.03□□□□□ -0.96
TMEM260-206ENST00000555046 SGK3Q96BR1 496 aa9.03□□□□□ -0.96
TMEM260-206ENST00000555046 ELMOD3Q96FG2 381 aa9.03□□□□□ -0.96
TMEM260-206ENST00000555046 SLC30A2Q9BRI3 323 aa9.03□□□□□ -0.96
TMEM260-206ENST00000555046 REG4Q9BYZ8 158 aa9.03□□□□□ -0.96
TMEM260-206ENST00000555046 TPK1Q9H3S4 243 aa9.03□□□□□ -0.96
TMEM260-206ENST00000555046 CHODLQ9H9P2 273 aa9.03□□□□□ -0.96
TMEM260-206ENST00000555046 ABCB9Q9NP78 766 aa9.03□□□□□ -0.96
TMEM260-206ENST00000555046 BRD7Q9NPI1 651 aa9.03□□□□□ -0.96
TMEM260-206ENST00000555046 CHCHD3Q9NX63 227 aaKnown RBP9.03□□□□□ -0.96
TMEM260-206ENST00000555046 NKX1-2Q9UD57 310 aaPredicted RBP9.03□□□□□ -0.96
TMEM260-206ENST00000555046 IL19Q9UHD0 177 aa9.03□□□□□ -0.96
TMEM260-206ENST00000555046 EXOGQ9Y2C4 368 aaKnown RBP9.03□□□□□ -0.96
TMEM260-206ENST00000555046 SNX5Q9Y5X3 404 aa9.03□□□□□ -0.96
TMEM260-206ENST00000555046 HRNRQ86YZ3 2850 aaPredicted RBP9.03□□□□□ -0.96
TMEM260-206ENST00000555046 A0A0U1RQV5 110 aa9.02□□□□□ -0.97
TMEM260-206ENST00000555046 IGHV1-46P01743 117 aa9.02□□□□□ -0.97
TMEM260-206ENST00000555046 HEXAP06865 529 aa9.02□□□□□ -0.97
TMEM260-206ENST00000555046 SLC2A1P11166 492 aa9.02□□□□□ -0.97
TMEM260-206ENST00000555046 PSKH1P11801 424 aa9.02□□□□□ -0.97
TMEM260-206ENST00000555046 GIFP27352 417 aa9.02□□□□□ -0.97
TMEM260-206ENST00000555046 DCKP27707 260 aa9.02□□□□□ -0.97
TMEM260-206ENST00000555046 CRYBB2P43320 205 aa9.02□□□□□ -0.97
TMEM260-206ENST00000555046 ZNF92Q03936 586 aa9.02□□□□□ -0.97
TMEM260-206ENST00000555046 TNK1Q13470 666 aa9.02□□□□□ -0.97
TMEM260-206ENST00000555046 CARTPTQ16568 116 aa9.02□□□□□ -0.97
TMEM260-206ENST00000555046 SNAI3Q3KNW1 292 aa9.02□□□□□ -0.97
TMEM260-206ENST00000555046 GLYATL3Q5SZD4 288 aa9.02□□□□□ -0.97
TMEM260-206ENST00000555046 DNM1P46Q6ZS02 220 aa9.02□□□□□ -0.97
TMEM260-206ENST00000555046 PRSS45Q7RTY3 260 aa9.02□□□□□ -0.97
TMEM260-206ENST00000555046 THAP5Q7Z6K1 395 aa9.02□□□□□ -0.97
TMEM260-206ENST00000555046 ZNF525Q8N782 197 aa9.02□□□□□ -0.97
TMEM260-206ENST00000555046 CELF2-AS1Q8N7Q2 184 aa9.02□□□□□ -0.97
TMEM260-206ENST00000555046 PLPP7Q8NBV4 271 aa9.02□□□□□ -0.97
TMEM260-206ENST00000555046 C10orf105Q8TEF2 133 aa9.02□□□□□ -0.97
TMEM260-206ENST00000555046 TFAP2CQ92754 450 aa9.02□□□□□ -0.97
TMEM260-206ENST00000555046 ERGIC1Q969X5 290 aa9.02□□□□□ -0.97
TMEM260-206ENST00000555046 TIMD4Q96H15 378 aa9.02□□□□□ -0.97
TMEM260-206ENST00000555046 REEP6Q96HR9 211 aa9.02□□□□□ -0.97
TMEM260-206ENST00000555046 C18orf12Q96KH6 178 aa9.02□□□□□ -0.97
TMEM260-206ENST00000555046 HIST1H2AAQ96QV6 131 aa9.02□□□□□ -0.97
TMEM260-206ENST00000555046 AMELYQ99218 206 aa9.02□□□□□ -0.97
TMEM260-206ENST00000555046 MSL2Q9HCI7 577 aa9.02□□□□□ -0.97
TMEM260-206ENST00000555046 R4GMQ9 66 aa9.02□□□□□ -0.97
TMEM260-206ENST00000555046 IGHV1-69-2A0A0G2JMI3 117 aa9.01□□□□□ -0.97
TMEM260-206ENST00000555046 LRRC30A6NM36 301 aa9.01□□□□□ -0.97
TMEM260-206ENST00000555046 LOC110117498-PIK3R3F6TDL0 507 aa9.01□□□□□ -0.97
TMEM260-206ENST00000555046 RRP9O43818 475 aaKnown RBP9.01□□□□□ -0.97
TMEM260-206ENST00000555046 DBTP11182 482 aaKnown RBP9.01□□□□□ -0.97
TMEM260-206ENST00000555046 ZNF12P17014 697 aa9.01□□□□□ -0.97
TMEM260-206ENST00000555046 USF1P22415 310 aaPredicted RBP9.01□□□□□ -0.97
TMEM260-206ENST00000555046 GNALP38405 381 aa9.01□□□□□ -0.97
TMEM260-206ENST00000555046 MAGEB1P43366 347 aa9.01□□□□□ -0.97
TMEM260-206ENST00000555046 MAP2K3P46734 347 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms