RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 TALDO1P37837 337 aa1.88□□□□□ -2.11
SCFD1-213ENST00000554776 PPICP45877 212 aa1.88□□□□□ -2.11
SCFD1-213ENST00000554776 UBE2E1P51965 193 aa1.88□□□□□ -2.11
SCFD1-213ENST00000554776 GFERP55789 205 aa1.88□□□□□ -2.11
SCFD1-213ENST00000554776 AP1S2P56377 157 aa1.88□□□□□ -2.11
SCFD1-213ENST00000554776 XIAPP98170 497 aa1.88□□□□□ -2.11
SCFD1-213ENST00000554776 C5orf64Q2M2E5 130 aa1.88□□□□□ -2.11
SCFD1-213ENST00000554776 MPV17L2Q567V2 206 aa1.88□□□□□ -2.11
SCFD1-213ENST00000554776 AVPI1Q5T686 147 aa1.88□□□□□ -2.11
SCFD1-213ENST00000554776 OR2T5Q6IEZ7 315 aa1.88□□□□□ -2.11
SCFD1-213ENST00000554776 NANOGP8Q6NSW7 305 aa1.88□□□□□ -2.11
SCFD1-213ENST00000554776 RWDD4Q6NW29 188 aaKnown RBP1.88□□□□□ -2.11
SCFD1-213ENST00000554776 ULK3Q6PHR2 472 aa1.88□□□□□ -2.11
SCFD1-213ENST00000554776 ASCL4Q6XD76 172 aa1.88□□□□□ -2.11
SCFD1-213ENST00000554776 WDR86Q86TI4 376 aa1.88□□□□□ -2.11
SCFD1-213ENST00000554776 RAB43Q86YS6 212 aa1.88□□□□□ -2.11
SCFD1-213ENST00000554776 CDKL3Q8IVW4 592 aaPredicted RBP1.88□□□□□ -2.11
SCFD1-213ENST00000554776 WDR31Q8NA23 367 aa1.88□□□□□ -2.11
SCFD1-213ENST00000554776 OR52K1Q8NGK4 314 aa1.88□□□□□ -2.11
SCFD1-213ENST00000554776 OR2T29Q8NH02 315 aa1.88□□□□□ -2.11
SCFD1-213ENST00000554776 UBALD1Q8TB05 177 aa1.88□□□□□ -2.11
SCFD1-213ENST00000554776 CIRBP-AS1Q8TBR5 109 aa1.88□□□□□ -2.11
SCFD1-213ENST00000554776 ZNF75CPQ92670 426 aaPredicted RBP1.88□□□□□ -2.11
SCFD1-213ENST00000554776 HAUS1Q96CS2 278 aa1.88□□□□□ -2.11
SCFD1-213ENST00000554776 UBE2E2Q96LR5 201 aa1.88□□□□□ -2.11
SCFD1-213ENST00000554776 CAMK2N2Q96S95 79 aa1.88□□□□□ -2.11
SCFD1-213ENST00000554776 CDX2Q99626 313 aaPredicted RBP1.88□□□□□ -2.11
SCFD1-213ENST00000554776 RBBP8Q99708 897 aa1.88□□□□□ -2.11
SCFD1-213ENST00000554776 GABRG3Q99928 467 aa1.88□□□□□ -2.11
SCFD1-213ENST00000554776 AGMATQ9BSE5 352 aa1.88□□□□□ -2.11
SCFD1-213ENST00000554776 GGTLC1Q9BX51 225 aa1.88□□□□□ -2.11
SCFD1-213ENST00000554776 LCE3DQ9BYE3 92 aa1.88□□□□□ -2.11
SCFD1-213ENST00000554776 ZNF442Q9H7R0 627 aa1.88□□□□□ -2.11
SCFD1-213ENST00000554776 RBFOX1Q9NWB1 397 aaKnown RBP1.88□□□□□ -2.11
SCFD1-213ENST00000554776 PCM1Q15154 2024 aa1.88□□□□□ -2.11
SCFD1-213ENST00000554776 TRAV6A0A075B6T7 132 aa1.87□□□□□ -2.11
SCFD1-213ENST00000554776 A0A1B0GUH1 482 aa1.87□□□□□ -2.11
SCFD1-213ENST00000554776 TMEM223A0PJW6 202 aa1.87□□□□□ -2.11
SCFD1-213ENST00000554776 PDZK1P1A8MUH7 402 aa1.87□□□□□ -2.11
SCFD1-213ENST00000554776 ZNF705GA8MUZ8 300 aaPredicted RBP1.87□□□□□ -2.11
SCFD1-213ENST00000554776 HACD1B0YJ81 288 aa1.87□□□□□ -2.11
SCFD1-213ENST00000554776 RSPH10B2B2RC85 870 aa1.87□□□□□ -2.11
SCFD1-213ENST00000554776 H0YJW9 148 aa1.87□□□□□ -2.11
SCFD1-213ENST00000554776 H3BN98 237 aa1.87□□□□□ -2.11
SCFD1-213ENST00000554776 RBFOX2O43251 390 aaKnown RBP eCLIP1.87□□□□□ -2.11
SCFD1-213ENST00000554776 B4GALT5O43286 388 aa1.87□□□□□ -2.11
SCFD1-213ENST00000554776 ZNF207O43670 478 aaKnown RBP1.87□□□□□ -2.11
SCFD1-213ENST00000554776 ZNF324O75467 553 aaPredicted RBP1.87□□□□□ -2.11
SCFD1-213ENST00000554776 SLC22A5O76082 557 aa1.87□□□□□ -2.11
SCFD1-213ENST00000554776 YIF1AO95070 293 aa1.87□□□□□ -2.11
SCFD1-213ENST00000554776 IGKV3-11P04433 115 aa1.87□□□□□ -2.11
SCFD1-213ENST00000554776 GLAP06280 429 aa1.87□□□□□ -2.11
SCFD1-213ENST00000554776 DCNP07585 359 aaKnown RBP1.87□□□□□ -2.11
SCFD1-213ENST00000554776 MRPL3P09001 348 aaKnown RBP1.87□□□□□ -2.11
SCFD1-213ENST00000554776 RSPH10BP0C881 870 aa1.87□□□□□ -2.11
SCFD1-213ENST00000554776 PSMC3P17980 439 aa1.87□□□□□ -2.11
SCFD1-213ENST00000554776 PTNP21246 168 aa1.87□□□□□ -2.11
SCFD1-213ENST00000554776 CPN2P22792 545 aa1.87□□□□□ -2.11
SCFD1-213ENST00000554776 MYL9P24844 172 aa1.87□□□□□ -2.11
SCFD1-213ENST00000554776 BRCA1P38398 1863 aaKnown RBP1.87□□□□□ -2.11
SCFD1-213ENST00000554776 LINC00315P59091 139 aa1.87□□□□□ -2.11
SCFD1-213ENST00000554776 TAS2R31P59538 309 aa1.87□□□□□ -2.11
SCFD1-213ENST00000554776 YWHAEP62258 255 aaKnown RBP1.87□□□□□ -2.11
SCFD1-213ENST00000554776 CRADDP78560 199 aa1.87□□□□□ -2.11
SCFD1-213ENST00000554776 UBE2SQ16763 222 aa1.87□□□□□ -2.11
SCFD1-213ENST00000554776 TPRG1LQ5T0D9 272 aa1.87□□□□□ -2.11
SCFD1-213ENST00000554776 SLC16A13Q7RTY0 426 aa1.87□□□□□ -2.11
SCFD1-213ENST00000554776 OR2L8Q8NGY9 312 aa1.87□□□□□ -2.11
SCFD1-213ENST00000554776 ASZ1Q8WWH4 475 aa1.87□□□□□ -2.11
SCFD1-213ENST00000554776 OR8D1Q8WZ84 308 aa1.87□□□□□ -2.11
SCFD1-213ENST00000554776 BTN2A3PQ96KV6 586 aa1.87□□□□□ -2.11
SCFD1-213ENST00000554776 C18orf15Q96N68 181 aa1.87□□□□□ -2.11
SCFD1-213ENST00000554776 FOPNLQ96NB1 174 aa1.87□□□□□ -2.11
SCFD1-213ENST00000554776 GPR21Q99679 349 aa1.87□□□□□ -2.11
SCFD1-213ENST00000554776 SAMD10Q9BYL1 202 aa1.87□□□□□ -2.11
SCFD1-213ENST00000554776 REEP1Q9H902 201 aa1.87□□□□□ -2.11
SCFD1-213ENST00000554776 DDX19AQ9NUU7 478 aaKnown RBP1.87□□□□□ -2.11
SCFD1-213ENST00000554776 TMEM100Q9NV29 134 aa1.87□□□□□ -2.11
SCFD1-213ENST00000554776 FLVCR2Q9UPI3 526 aa1.87□□□□□ -2.11
SCFD1-213ENST00000554776 CABIN1Q9Y6J0 2220 aa1.87□□□□□ -2.11
SCFD1-213ENST00000554776 MYO10Q9HD67 2058 aa1.87□□□□□ -2.11
SCFD1-213ENST00000554776 IGHV3OR16-9A0A0B4J2B5 98 aa1.86□□□□□ -2.11
SCFD1-213ENST00000554776 IGHV1OR15-9A0A0B4J2B8 117 aa1.86□□□□□ -2.11
SCFD1-213ENST00000554776 CENPXA8MT69 81 aa1.86□□□□□ -2.11
SCFD1-213ENST00000554776 CCNKO75909 580 aa1.86□□□□□ -2.11
SCFD1-213ENST00000554776 VAMP5O95183 116 aa1.86□□□□□ -2.11
SCFD1-213ENST00000554776 KLK1P06870 262 aa1.86□□□□□ -2.11
SCFD1-213ENST00000554776 TACSTD2P09758 323 aa1.86□□□□□ -2.11
SCFD1-213ENST00000554776 LINC00869P0C866 280 aa1.86□□□□□ -2.11
SCFD1-213ENST00000554776 THRAP10827 490 aa1.86□□□□□ -2.11
SCFD1-213ENST00000554776 IGFBP3P17936 291 aaPredicted RBP1.86□□□□□ -2.11
SCFD1-213ENST00000554776 NPY1RP25929 384 aa1.86□□□□□ -2.11
SCFD1-213ENST00000554776 ATP5J2P56134 94 aa1.86□□□□□ -2.11
SCFD1-213ENST00000554776 CLDN6P56747 220 aa1.86□□□□□ -2.11
SCFD1-213ENST00000554776 PFN3P60673 137 aa1.86□□□□□ -2.11
SCFD1-213ENST00000554776 SLC25A25Q6KCM7 469 aa1.86□□□□□ -2.11
SCFD1-213ENST00000554776 OR2W3Q7Z3T1 314 aa1.86□□□□□ -2.11
SCFD1-213ENST00000554776 SLC30A8Q8IWU4 369 aa1.86□□□□□ -2.11
SCFD1-213ENST00000554776 TMEM256Q8N2U0 113 aa1.86□□□□□ -2.11
SCFD1-213ENST00000554776 ARHGAP18Q8N392 663 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms