RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 A8MV72 311 aaPredicted RBP11.15□□□□□ -0.62
VIPAS39-206ENST00000553888 M0R135 149 aa11.15□□□□□ -0.62
VIPAS39-206ENST00000553888 SGCEO43556 437 aa11.15□□□□□ -0.62
VIPAS39-206ENST00000553888 MT-ND4P03905 459 aa11.15□□□□□ -0.62
VIPAS39-206ENST00000553888 TAS2R20P59543 309 aa11.15□□□□□ -0.62
VIPAS39-206ENST00000553888 ZNF799Q96GE5 643 aa11.15□□□□□ -0.62
VIPAS39-206ENST00000553888 NIPAL2Q9H841 368 aa11.15□□□□□ -0.62
VIPAS39-206ENST00000553888 ELF5Q9UKW6 265 aaPredicted RBP11.15□□□□□ -0.62
VIPAS39-206ENST00000553888 MCTS1Q9ULC4 181 aaKnown RBP11.15□□□□□ -0.62
VIPAS39-206ENST00000553888 KCNMB2Q9Y691 235 aa11.15□□□□□ -0.62
VIPAS39-206ENST00000553888 IGKV3D-15A0A087WSY6 115 aa11.15□□□□□ -0.62
VIPAS39-206ENST00000553888 ZNF503-AS2A6NEH8 195 aa11.15□□□□□ -0.62
VIPAS39-206ENST00000553888 SYNGR3O43761 229 aa11.15□□□□□ -0.62
VIPAS39-206ENST00000553888 ORC5O43913 435 aa11.15□□□□□ -0.62
VIPAS39-206ENST00000553888 CTAG2O75638 210 aa11.15□□□□□ -0.62
VIPAS39-206ENST00000553888 TPTEP56180 551 aa11.15□□□□□ -0.62
VIPAS39-206ENST00000553888 PSG4Q00888 419 aa11.15□□□□□ -0.62
VIPAS39-206ENST00000553888 GUCA2AQ02747 115 aa11.15□□□□□ -0.62
VIPAS39-206ENST00000553888 RTP5Q14D33 572 aa11.15□□□□□ -0.62
VIPAS39-206ENST00000553888 TMEM255AQ5JRV8 349 aa11.15□□□□□ -0.62
VIPAS39-206ENST00000553888 GLT8D1Q68CQ7 371 aa11.15□□□□□ -0.62
VIPAS39-206ENST00000553888 FAAP20Q6NZ36 180 aa11.15□□□□□ -0.62
VIPAS39-206ENST00000553888 RTN4RL2Q86UN3 420 aa11.15□□□□□ -0.62
VIPAS39-206ENST00000553888 LYPD6Q86Y78 171 aa11.15□□□□□ -0.62
VIPAS39-206ENST00000553888 OR1M1Q8NGA1 313 aa11.15□□□□□ -0.62
VIPAS39-206ENST00000553888 FAM46BQ96A09 425 aa11.15□□□□□ -0.62
VIPAS39-206ENST00000553888 ACKR4Q9NPB9 350 aa11.15□□□□□ -0.62
VIPAS39-206ENST00000553888 PRR14LQ5THK1 2151 aa11.15□□□□□ -0.62
VIPAS39-206ENST00000553888 ACOT7O00154 380 aa11.15□□□□□ -0.63
VIPAS39-206ENST00000553888 ZNF20P17024 532 aa11.15□□□□□ -0.63
VIPAS39-206ENST00000553888 TMEM11P17152 192 aa11.15□□□□□ -0.63
VIPAS39-206ENST00000553888 GDNFP39905 211 aa11.15□□□□□ -0.63
VIPAS39-206ENST00000553888 POLR2GP62487 172 aaKnown RBP eCLIP11.15□□□□□ -0.63
VIPAS39-206ENST00000553888 ARF1P84077 181 aaKnown RBP11.15□□□□□ -0.63
VIPAS39-206ENST00000553888 RSBN1Q5VWQ0 802 aaPredicted RBP11.15□□□□□ -0.63
VIPAS39-206ENST00000553888 RHOUQ7L0Q8 258 aa11.15□□□□□ -0.63
VIPAS39-206ENST00000553888 SLC16A14Q7RTX9 510 aa11.15□□□□□ -0.63
VIPAS39-206ENST00000553888 TOMM5Q8N4H5 51 aa11.15□□□□□ -0.63
VIPAS39-206ENST00000553888 ZNF565Q8N9K5 539 aa11.15□□□□□ -0.63
VIPAS39-206ENST00000553888 SMIM4Q8WVI0 70 aa11.15□□□□□ -0.63
VIPAS39-206ENST00000553888 RNF170Q96K19 258 aa11.15□□□□□ -0.63
VIPAS39-206ENST00000553888 ZDHHC11Q9H8X9 412 aa11.15□□□□□ -0.63
VIPAS39-206ENST00000553888 ZMAT3Q9HA38 289 aaKnown RBP11.15□□□□□ -0.63
VIPAS39-206ENST00000553888 ETV7Q9Y603 341 aa11.15□□□□□ -0.63
VIPAS39-206ENST00000553888 CACNG2Q9Y698 323 aa11.15□□□□□ -0.63
VIPAS39-206ENST00000553888 LOC100289279A0A1B0GTE1 492 aa11.14□□□□□ -0.63
VIPAS39-206ENST00000553888 KLK10O43240 276 aa11.14□□□□□ -0.63
VIPAS39-206ENST00000553888 ARSBP15848 533 aa11.14□□□□□ -0.63
VIPAS39-206ENST00000553888 BDKRB2P30411 391 aa11.14□□□□□ -0.63
VIPAS39-206ENST00000553888 NR4A2P43354 598 aa11.14□□□□□ -0.63
VIPAS39-206ENST00000553888 CCR6P51684 374 aa11.14□□□□□ -0.63
VIPAS39-206ENST00000553888 MOGAT2Q3SYC2 334 aa11.14□□□□□ -0.63
VIPAS39-206ENST00000553888 SIGIRRQ6IA17 410 aa11.14□□□□□ -0.63
VIPAS39-206ENST00000553888 THRSPQ92748 146 aa11.14□□□□□ -0.63
VIPAS39-206ENST00000553888 TMEM45BQ96B21 275 aa11.14□□□□□ -0.63
VIPAS39-206ENST00000553888 WNT5BQ9H1J7 359 aa11.14□□□□□ -0.63
VIPAS39-206ENST00000553888 ATG5Q9H1Y0 275 aa11.14□□□□□ -0.63
VIPAS39-206ENST00000553888 MOB1AQ9H8S9 216 aa11.14□□□□□ -0.63
VIPAS39-206ENST00000553888 RNF121Q9H920 327 aa11.14□□□□□ -0.63
VIPAS39-206ENST00000553888 PAQR5Q9NXK6 330 aaPredicted RBP11.14□□□□□ -0.63
VIPAS39-206ENST00000553888 ZNF224Q9NZL3 707 aa11.14□□□□□ -0.63
VIPAS39-206ENST00000553888 PRSS50Q9UI38 385 aa11.14□□□□□ -0.63
VIPAS39-206ENST00000553888 CST2P09228 141 aa11.14□□□□□ -0.63
VIPAS39-206ENST00000553888 SFTPCP11686 197 aa11.14□□□□□ -0.63
VIPAS39-206ENST00000553888 FAHP16930 419 aa11.14□□□□□ -0.63
VIPAS39-206ENST00000553888 CRYGSP22914 178 aa11.14□□□□□ -0.63
VIPAS39-206ENST00000553888 OTX1P32242 354 aaPredicted RBP11.14□□□□□ -0.63
VIPAS39-206ENST00000553888 HTR5AP47898 357 aa11.14□□□□□ -0.63
VIPAS39-206ENST00000553888 PITPNAQ00169 270 aa11.14□□□□□ -0.63
VIPAS39-206ENST00000553888 MZT2BQ6NZ67 158 aa11.14□□□□□ -0.63
VIPAS39-206ENST00000553888 CHMP1BQ7LBR1 199 aa11.14□□□□□ -0.63
VIPAS39-206ENST00000553888 OR5AS1Q8N127 324 aa11.14□□□□□ -0.63
VIPAS39-206ENST00000553888 OR14K1Q8NGZ2 314 aa11.14□□□□□ -0.63
VIPAS39-206ENST00000553888 SLC17A5Q9NRA2 495 aa11.14□□□□□ -0.63
VIPAS39-206ENST00000553888 POU2F3Q9UKI9 436 aa11.14□□□□□ -0.63
VIPAS39-206ENST00000553888 CDV3Q9UKY7 258 aaKnown RBP11.14□□□□□ -0.63
VIPAS39-206ENST00000553888 IGKV1-9A0A0C4DH69 117 aa11.13□□□□□ -0.63
VIPAS39-206ENST00000553888 CIB4A0PJX0 185 aa11.13□□□□□ -0.63
VIPAS39-206ENST00000553888 ZNF891A8MT65 544 aaPredicted RBP11.13□□□□□ -0.63
VIPAS39-206ENST00000553888 K7EM74 188 aa11.13□□□□□ -0.63
VIPAS39-206ENST00000553888 CCL2P13500 99 aa11.13□□□□□ -0.63
VIPAS39-206ENST00000553888 PLET1Q6UQ28 207 aa11.13□□□□□ -0.63
VIPAS39-206ENST00000553888 UBASH3BQ8TF42 649 aa11.13□□□□□ -0.63
VIPAS39-206ENST00000553888 RAB40AQ8WXH6 277 aa11.13□□□□□ -0.63
VIPAS39-206ENST00000553888 OR2H1Q9GZK4 316 aa11.13□□□□□ -0.63
VIPAS39-206ENST00000553888 PIEZO2Q9H5I5 2752 aa11.13□□□□□ -0.63
VIPAS39-206ENST00000553888 TRAV18A0A075B6X5 111 aa11.13□□□□□ -0.63
VIPAS39-206ENST00000553888 ACTL6AO96019 429 aa11.13□□□□□ -0.63
VIPAS39-206ENST00000553888 HLA-HP01893 362 aa11.13□□□□□ -0.63
VIPAS39-206ENST00000553888 PDGFAP04085 211 aa11.13□□□□□ -0.63
VIPAS39-206ENST00000553888 CTSSP25774 331 aa11.13□□□□□ -0.63
VIPAS39-206ENST00000553888 FOXC1Q12948 553 aa11.13□□□□□ -0.63
VIPAS39-206ENST00000553888 RAB35Q15286 201 aa11.13□□□□□ -0.63
VIPAS39-206ENST00000553888 RIPPLY2Q5TAB7 128 aa11.13□□□□□ -0.63
VIPAS39-206ENST00000553888 AGAP6Q5VW22 663 aa11.13□□□□□ -0.63
VIPAS39-206ENST00000553888 ANKRD16Q6P6B7 361 aa11.13□□□□□ -0.63
VIPAS39-206ENST00000553888 CPEB3Q8NE35 698 aaKnown RBP11.13□□□□□ -0.63
VIPAS39-206ENST00000553888 OR5D18Q8NGL1 313 aa11.13□□□□□ -0.63
VIPAS39-206ENST00000553888 OR5D14Q8NGL3 314 aa11.13□□□□□ -0.63
VIPAS39-206ENST00000553888 OR5M9Q8NGP3 310 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms