RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 1 (best) BASIC

Gene SYNE3, Length 2,615 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 CDCA3Q99618 268 aaPredicted RBP15.59■□□□□ 0.09
SYNE3-202ENST00000553340 IFNA4P05014 189 aa15.58■□□□□ 0.08
SYNE3-202ENST00000553340 PET100P0DJ07 73 aa15.58■□□□□ 0.08
SYNE3-202ENST00000553340 MUC1P15941 1255 aaPredicted RBP15.58■□□□□ 0.08
SYNE3-202ENST00000553340 ZNF20P17024 532 aa15.58■□□□□ 0.08
SYNE3-202ENST00000553340 DRD1P21728 446 aa15.58■□□□□ 0.08
SYNE3-202ENST00000553340 NFYBP25208 207 aa15.58■□□□□ 0.08
SYNE3-202ENST00000553340 FASLGP48023 281 aa15.58■□□□□ 0.08
SYNE3-202ENST00000553340 POU3F1Q03052 451 aaPredicted RBP15.58■□□□□ 0.08
SYNE3-202ENST00000553340 GLIPR1L1Q6UWM5 242 aa15.58■□□□□ 0.08
SYNE3-202ENST00000553340 NAA40Q86UY6 237 aa15.58■□□□□ 0.08
SYNE3-202ENST00000553340 TMEM234Q8WY98 164 aa15.58■□□□□ 0.08
SYNE3-202ENST00000553340 CPNE2Q96FN4 548 aaPredicted RBP15.58■□□□□ 0.08
SYNE3-202ENST00000553340 SMIM8Q96KF7 97 aa15.58■□□□□ 0.08
SYNE3-202ENST00000553340 METTL8Q9H825 291 aaKnown RBP15.58■□□□□ 0.08
SYNE3-202ENST00000553340 ANAPC10Q9UM13 185 aa15.58■□□□□ 0.08
SYNE3-202ENST00000553340 MEX3AA1L020 520 aaKnown RBP15.58■□□□□ 0.08
SYNE3-202ENST00000553340 MPIG6BO95866 241 aa15.58■□□□□ 0.08
SYNE3-202ENST00000553340 H1FNTQ75WM6 255 aaPredicted RBP15.58■□□□□ 0.08
SYNE3-202ENST00000553340 BHLHE23Q8NDY6 225 aa15.58■□□□□ 0.08
SYNE3-202ENST00000553340 C2CD4CQ8TF44 421 aa15.58■□□□□ 0.08
SYNE3-202ENST00000553340 C11orf40Q8WZ69 217 aa15.58■□□□□ 0.08
SYNE3-202ENST00000553340 SLC7A5P2Q9GIP4 190 aa15.58■□□□□ 0.08
SYNE3-202ENST00000553340 MED29Q9NX70 200 aa15.58■□□□□ 0.08
SYNE3-202ENST00000553340 DNAJB11Q9UBS4 358 aa15.58■□□□□ 0.08
SYNE3-202ENST00000553340 HIST1H1DP16402 221 aaKnown RBP15.57■□□□□ 0.08
SYNE3-202ENST00000553340 KCNJ3P48549 501 aa15.57■□□□□ 0.08
SYNE3-202ENST00000553340 PLAC9Q5JTB6 97 aa15.57■□□□□ 0.08
SYNE3-202ENST00000553340 KIAA0895LQ68EN5 471 aa15.57■□□□□ 0.08
SYNE3-202ENST00000553340 WDFY1Q8IWB7 410 aa15.57■□□□□ 0.08
SYNE3-202ENST00000553340 OR6S1Q8NH40 331 aa15.57■□□□□ 0.08
SYNE3-202ENST00000553340 SLC5A7Q9GZV3 580 aa15.57■□□□□ 0.08
SYNE3-202ENST00000553340 MRPS28Q9Y2Q9 187 aaKnown RBP15.57■□□□□ 0.08
SYNE3-202ENST00000553340 A0A0A6YYD4 124 aa15.57■□□□□ 0.08
SYNE3-202ENST00000553340 SOCS1O15524 211 aa15.57■□□□□ 0.08
SYNE3-202ENST00000553340 CSTBP04080 98 aaKnown RBP15.57■□□□□ 0.08
SYNE3-202ENST00000553340 FPR2P25090 351 aa15.57■□□□□ 0.08
SYNE3-202ENST00000553340 GPR85P60893 370 aa15.57■□□□□ 0.08
SYNE3-202ENST00000553340 FOXK1P85037 733 aa15.57■□□□□ 0.08
SYNE3-202ENST00000553340 HSF1Q00613 529 aa15.57■□□□□ 0.08
SYNE3-202ENST00000553340 PEA15Q15121 130 aa15.57■□□□□ 0.08
SYNE3-202ENST00000553340 NSDHLQ15738 373 aa15.57■□□□□ 0.08
SYNE3-202ENST00000553340 TMEM104Q8NE00 496 aa15.57■□□□□ 0.08
SYNE3-202ENST00000553340 OR5H2Q8NGV7 314 aa15.57■□□□□ 0.08
SYNE3-202ENST00000553340 KCNG3Q8TAE7 436 aa15.57■□□□□ 0.08
SYNE3-202ENST00000553340 SFT2D1Q8WV19 159 aa15.57■□□□□ 0.08
SYNE3-202ENST00000553340 C2orf50Q96LR7 162 aa15.57■□□□□ 0.08
SYNE3-202ENST00000553340 SPACA5Q96QH8 159 aa15.57■□□□□ 0.08
SYNE3-202ENST00000553340 C8orf33Q9H7E9 229 aaPredicted RBP15.57■□□□□ 0.08
SYNE3-202ENST00000553340 PRR13Q9NZ81 148 aa15.57■□□□□ 0.08
SYNE3-202ENST00000553340 TLCD2A6NGC4 264 aa15.56■□□□□ 0.08
SYNE3-202ENST00000553340 NPIPB13A6NJU9 1138 aa15.56■□□□□ 0.08
SYNE3-202ENST00000553340 NPIPB4C9JG80 1138 aa15.56■□□□□ 0.08
SYNE3-202ENST00000553340 PRSS44E7EML9 344 aa15.56■□□□□ 0.08
SYNE3-202ENST00000553340 RNASEK-C17orf49H0YIS7 233 aa15.56■□□□□ 0.08
SYNE3-202ENST00000553340 PI3P19957 117 aa15.56■□□□□ 0.08
SYNE3-202ENST00000553340 CCR5P51681 352 aa15.56■□□□□ 0.08
SYNE3-202ENST00000553340 HTRA3P83110 453 aa15.56■□□□□ 0.08
SYNE3-202ENST00000553340 TLE3Q04726 772 aa15.56■□□□□ 0.08
SYNE3-202ENST00000553340 ANKRD55Q3KP44 614 aa15.56■□□□□ 0.08
SYNE3-202ENST00000553340 TMEM200AQ86VY9 491 aa15.56■□□□□ 0.08
SYNE3-202ENST00000553340 MFSD8Q8NHS3 518 aa15.56■□□□□ 0.08
SYNE3-202ENST00000553340 NUBPLQ8TB37 319 aa15.56■□□□□ 0.08
SYNE3-202ENST00000553340 KLHDC7BQ96G42 594 aa15.56■□□□□ 0.08
SYNE3-202ENST00000553340 ARL5BQ96KC2 179 aa15.56■□□□□ 0.08
SYNE3-202ENST00000553340 SLC26A1Q9H2B4 701 aa15.56■□□□□ 0.08
SYNE3-202ENST00000553340 GPR27Q9NS67 375 aa15.56■□□□□ 0.08
SYNE3-202ENST00000553340 LHX6Q9UPM6 363 aa15.56■□□□□ 0.08
SYNE3-202ENST00000553340 THADAQ6YHU6 1953 aa15.56■□□□□ 0.08
SYNE3-202ENST00000553340 XIRP2A4UGR9 3374 aa15.56■□□□□ 0.08
SYNE3-202ENST00000553340 C10orf142B7Z368 130 aa15.56■□□□□ 0.08
SYNE3-202ENST00000553340 SFTA3P0C7M3 94 aa15.56■□□□□ 0.08
SYNE3-202ENST00000553340 BCKDHBP21953 392 aa15.56■□□□□ 0.08
SYNE3-202ENST00000553340 SUPT4H1P63272 117 aaKnown RBP15.56■□□□□ 0.08
SYNE3-202ENST00000553340 RAB32Q13637 225 aa15.56■□□□□ 0.08
SYNE3-202ENST00000553340 PEG10Q86TG7 708 aaKnown RBP15.56■□□□□ 0.08
SYNE3-202ENST00000553340 ZFP82Q8N141 532 aa15.56■□□□□ 0.08
SYNE3-202ENST00000553340 OR1N1Q8NGS0 311 aa15.56■□□□□ 0.08
SYNE3-202ENST00000553340 OR51E1Q8TCB6 317 aa15.56■□□□□ 0.08
SYNE3-202ENST00000553340 OR10C1Q96KK4 312 aa15.56■□□□□ 0.08
SYNE3-202ENST00000553340 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.56■□□□□ 0.08
SYNE3-202ENST00000553340 SRPK3Q9UPE1 567 aa15.56■□□□□ 0.08
SYNE3-202ENST00000553340 PIAS3Q9Y6X2 628 aa15.56■□□□□ 0.08
SYNE3-202ENST00000553340 TAAR5O14804 337 aa15.55■□□□□ 0.08
SYNE3-202ENST00000553340 CDC14BO60729 498 aa15.55■□□□□ 0.08
SYNE3-202ENST00000553340 MED6O75586 246 aa15.55■□□□□ 0.08
SYNE3-202ENST00000553340 FAM189A2Q15884 450 aa15.55■□□□□ 0.08
SYNE3-202ENST00000553340 OR51F2Q8NH61 342 aa15.55■□□□□ 0.08
SYNE3-202ENST00000553340 C5orf34Q96MH7 638 aa15.55■□□□□ 0.08
SYNE3-202ENST00000553340 NECAB3Q96P71 396 aaPredicted RBP15.55■□□□□ 0.08
SYNE3-202ENST00000553340 OCSTAMPQ9BR26 566 aa15.55■□□□□ 0.08
SYNE3-202ENST00000553340 RTBDNQ9BSG5 229 aaPredicted RBP15.55■□□□□ 0.08
SYNE3-202ENST00000553340 TMEM59Q9BXS4 323 aa15.55■□□□□ 0.08
SYNE3-202ENST00000553340 TAF9BQ9HBM6 251 aa15.55■□□□□ 0.08
SYNE3-202ENST00000553340 DHCR7Q9UBM7 475 aaKnown RBP15.55■□□□□ 0.08
SYNE3-202ENST00000553340 RP1P56715 2156 aa15.55■□□□□ 0.08
SYNE3-202ENST00000553340 LILRA5A6NI73 299 aa15.55■□□□□ 0.08
SYNE3-202ENST00000553340 LRP3O75074 770 aa15.55■□□□□ 0.08
SYNE3-202ENST00000553340 EFNA3P52797 238 aa15.55■□□□□ 0.08
SYNE3-202ENST00000553340 SWI5Q1ZZU3 235 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms