RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 PPIAL4AQ9Y536 164 aa13.31□□□□□ -0.28
CDK4-215ENST00000553237 AUP1Q9Y679 476 aa13.31□□□□□ -0.28
CDK4-215ENST00000553237 A8MXK9 166 aa13.3□□□□□ -0.28
CDK4-215ENST00000553237 ZNF878C9JN71 531 aa13.3□□□□□ -0.28
CDK4-215ENST00000553237 FAM20BO75063 409 aa13.3□□□□□ -0.28
CDK4-215ENST00000553237 FASP25445 335 aa13.3□□□□□ -0.28
CDK4-215ENST00000553237 GRK5P34947 590 aa13.3□□□□□ -0.28
CDK4-215ENST00000553237 CD200P41217 278 aa13.3□□□□□ -0.28
CDK4-215ENST00000553237 GATA4P43694 442 aa13.3□□□□□ -0.28
CDK4-215ENST00000553237 EIF2B1Q14232 305 aaKnown RBP13.3□□□□□ -0.28
CDK4-215ENST00000553237 USP43Q70EL4 1123 aa13.3□□□□□ -0.28
CDK4-215ENST00000553237 DPY19L4Q7Z388 723 aa13.3□□□□□ -0.28
CDK4-215ENST00000553237 AMIGO2Q86SJ2 522 aa13.3□□□□□ -0.28
CDK4-215ENST00000553237 ERI1Q8IV48 349 aaKnown RBP13.3□□□□□ -0.28
CDK4-215ENST00000553237 CELF2-AS1Q8N7Q2 184 aa13.3□□□□□ -0.28
CDK4-215ENST00000553237 OR11L1Q8NGX0 322 aa13.3□□□□□ -0.28
CDK4-215ENST00000553237 OR6N2Q8NGY6 317 aa13.3□□□□□ -0.28
CDK4-215ENST00000553237 OR5K1Q8NHB7 308 aa13.3□□□□□ -0.28
CDK4-215ENST00000553237 LRTOMTQ8WZ04 291 aa13.3□□□□□ -0.28
CDK4-215ENST00000553237 ADAT1Q9BUB4 502 aaKnown RBP13.3□□□□□ -0.28
CDK4-215ENST00000553237 MRI1Q9BV20 369 aa13.3□□□□□ -0.28
CDK4-215ENST00000553237 SSBP3Q9BWW4 388 aaPredicted RBP13.3□□□□□ -0.28
CDK4-215ENST00000553237 OR51V1Q9H2C8 321 aa13.3□□□□□ -0.28
CDK4-215ENST00000553237 KIF17Q9P2E2 1029 aa13.3□□□□□ -0.28
CDK4-215ENST00000553237 MIOXQ9UGB7 285 aa13.3□□□□□ -0.28
CDK4-215ENST00000553237 LRCH1Q9Y2L9 728 aa13.3□□□□□ -0.28
CDK4-215ENST00000553237 TRIM77I1YAP6 450 aa13.29□□□□□ -0.28
CDK4-215ENST00000553237 TBX1O43435 398 aa13.29□□□□□ -0.28
CDK4-215ENST00000553237 FPR2P25090 351 aa13.29□□□□□ -0.28
CDK4-215ENST00000553237 GSTT1P30711 240 aa13.29□□□□□ -0.28
CDK4-215ENST00000553237 DAPP51397 102 aa13.29□□□□□ -0.28
CDK4-215ENST00000553237 BLVRAP53004 296 aa13.29□□□□□ -0.28
CDK4-215ENST00000553237 GNB2P62879 340 aa13.29□□□□□ -0.28
CDK4-215ENST00000553237 ACTG1P63261 375 aa13.29□□□□□ -0.28
CDK4-215ENST00000553237 ZNF404Q494X3 552 aa13.29□□□□□ -0.28
CDK4-215ENST00000553237 ARMCX4Q5H9R4 360 aa13.29□□□□□ -0.28
CDK4-215ENST00000553237 FAHD1Q6P587 224 aa13.29□□□□□ -0.28
CDK4-215ENST00000553237 LYPD2Q6UXB3 125 aa13.29□□□□□ -0.28
CDK4-215ENST00000553237 C12orf54Q6X4T0 127 aa13.29□□□□□ -0.28
CDK4-215ENST00000553237 BOLLQ8N9W6 283 aaKnown RBP13.29□□□□□ -0.28
CDK4-215ENST00000553237 OR56B2PQ8NGI1 322 aa13.29□□□□□ -0.28
CDK4-215ENST00000553237 ZFAND2BQ8WV99 257 aa13.29□□□□□ -0.28
CDK4-215ENST00000553237 ERGIC1Q969X5 290 aa13.29□□□□□ -0.28
CDK4-215ENST00000553237 NEIL1Q96FI4 390 aaPredicted RBP13.29□□□□□ -0.28
CDK4-215ENST00000553237 JMJD8Q96S16 334 aa13.29□□□□□ -0.28
CDK4-215ENST00000553237 INTS14Q96SY0 518 aa13.29□□□□□ -0.28
CDK4-215ENST00000553237 ABHD6Q9BV23 337 aa13.29□□□□□ -0.28
CDK4-215ENST00000553237 SLC22A4Q9H015 551 aa13.29□□□□□ -0.28
CDK4-215ENST00000553237 ESM1Q9NQ30 184 aa13.29□□□□□ -0.28
CDK4-215ENST00000553237 PAPOLBQ9NRJ5 636 aaKnown RBP13.29□□□□□ -0.28
CDK4-215ENST00000553237 G3V2T6 193 aa13.28□□□□□ -0.28
CDK4-215ENST00000553237 GLCEO94923 617 aa13.28□□□□□ -0.28
CDK4-215ENST00000553237 ANXA2P07355 339 aaKnown RBP13.28□□□□□ -0.28
CDK4-215ENST00000553237 GRPP07492 148 aa13.28□□□□□ -0.28
CDK4-215ENST00000553237 FCGR1AP12314 374 aa13.28□□□□□ -0.28
CDK4-215ENST00000553237 HSD11B1P28845 292 aa13.28□□□□□ -0.28
CDK4-215ENST00000553237 CD80P33681 288 aa13.28□□□□□ -0.28
CDK4-215ENST00000553237 SLC15A1P46059 708 aa13.28□□□□□ -0.28
CDK4-215ENST00000553237 CX3CR1P49238 355 aa13.28□□□□□ -0.28
CDK4-215ENST00000553237 GRB2P62993 217 aaKnown RBP13.28□□□□□ -0.28
CDK4-215ENST00000553237 PAX8Q06710 450 aa13.28□□□□□ -0.28
CDK4-215ENST00000553237 KLF17Q5JT82 389 aaPredicted RBP13.28□□□□□ -0.28
CDK4-215ENST00000553237 SFRP4Q6FHJ7 346 aaPredicted RBP13.28□□□□□ -0.28
CDK4-215ENST00000553237 PLBD1Q6P4A8 553 aa13.28□□□□□ -0.28
CDK4-215ENST00000553237 OR8B3Q8NGG8 313 aa13.28□□□□□ -0.28
CDK4-215ENST00000553237 Q8TCH9 128 aa13.28□□□□□ -0.28
CDK4-215ENST00000553237 DNAJC9Q8WXX5 260 aa13.28□□□□□ -0.28
CDK4-215ENST00000553237 ZMYND19Q96E35 227 aaPredicted RBP13.28□□□□□ -0.28
CDK4-215ENST00000553237 PLEKHA8Q96JA3 519 aa13.28□□□□□ -0.28
CDK4-215ENST00000553237 OR8B2Q96RD0 313 aa13.28□□□□□ -0.28
CDK4-215ENST00000553237 AMELYQ99218 206 aa13.28□□□□□ -0.28
CDK4-215ENST00000553237 FN3KRPQ9HA64 309 aa13.28□□□□□ -0.28
CDK4-215ENST00000553237 BRD7Q9NPI1 651 aa13.28□□□□□ -0.28
CDK4-215ENST00000553237 DNAJC27Q9NZQ0 273 aa13.28□□□□□ -0.28
CDK4-215ENST00000553237 ZNF69Q9UC07 566 aa13.28□□□□□ -0.28
CDK4-215ENST00000553237 NUP50Q9UKX7 468 aa13.28□□□□□ -0.28
CDK4-215ENST00000553237 NOP16Q9Y3C1 178 aaKnown RBP13.28□□□□□ -0.28
CDK4-215ENST00000553237 IGHV3OR16-10A0A075B7F0 116 aa13.27□□□□□ -0.29
CDK4-215ENST00000553237 PRR23D1E9PI22 279 aaPredicted RBP13.27□□□□□ -0.29
CDK4-215ENST00000553237 GMDSO60547 372 aa13.27□□□□□ -0.29
CDK4-215ENST00000553237 HMGN1P05114 100 aa13.27□□□□□ -0.29
CDK4-215ENST00000553237 PRR23D2P0DMB1 279 aaPredicted RBP13.27□□□□□ -0.29
CDK4-215ENST00000553237 PAICSP22234 425 aaKnown RBP13.27□□□□□ -0.29
CDK4-215ENST00000553237 PITPNBP48739 271 aa13.27□□□□□ -0.29
CDK4-215ENST00000553237 ACTR3P61158 418 aa13.27□□□□□ -0.29
CDK4-215ENST00000553237 CDK5Q00535 292 aa13.27□□□□□ -0.29
CDK4-215ENST00000553237 PAX2Q02962 417 aa13.27□□□□□ -0.29
CDK4-215ENST00000553237 KPNB1Q14974 876 aaKnown RBP13.27□□□□□ -0.29
CDK4-215ENST00000553237 TIGD6Q17RP2 521 aa13.27□□□□□ -0.29
CDK4-215ENST00000553237 TMEM236Q5W0B7 351 aa13.27□□□□□ -0.29
CDK4-215ENST00000553237 FAM57BQ71RH2 274 aa13.27□□□□□ -0.29
CDK4-215ENST00000553237 NLRC3Q7RTR2 1065 aa13.27□□□□□ -0.29
CDK4-215ENST00000553237 ZDHHC13Q8IUH4 622 aa13.27□□□□□ -0.29
CDK4-215ENST00000553237 BCL6BQ8N143 479 aaPredicted RBP13.27□□□□□ -0.29
CDK4-215ENST00000553237 SIGLECL1Q8N7X8 197 aa13.27□□□□□ -0.29
CDK4-215ENST00000553237 ZDHHC22Q8N966 263 aa13.27□□□□□ -0.29
CDK4-215ENST00000553237 FAM216AQ8WUB2 273 aa13.27□□□□□ -0.29
CDK4-215ENST00000553237 PYDC1Q8WXC3 89 aa13.27□□□□□ -0.29
CDK4-215ENST00000553237 RAB40AQ8WXH6 277 aa13.27□□□□□ -0.29
CDK4-215ENST00000553237 GCDHQ92947 438 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms