RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 CHN2P52757 468 aa8.76□□□□□ -1.01
TRAFD1-208ENST00000552890 CDH15P55291 814 aa8.76□□□□□ -1.01
TRAFD1-208ENST00000552890 CCL8P80075 99 aa8.76□□□□□ -1.01
TRAFD1-208ENST00000552890 RIPPLY1Q0D2K3 151 aa8.76□□□□□ -1.01
TRAFD1-208ENST00000552890 OR8G1Q15617 311 aa8.76□□□□□ -1.01
TRAFD1-208ENST00000552890 CARTPTQ16568 116 aa8.76□□□□□ -1.01
TRAFD1-208ENST00000552890 ZNF181Q2M3W8 571 aa8.76□□□□□ -1.01
TRAFD1-208ENST00000552890 BCL2L15Q5TBC7 163 aa8.76□□□□□ -1.01
TRAFD1-208ENST00000552890 LRRN1Q6UXK5 716 aa8.76□□□□□ -1.01
TRAFD1-208ENST00000552890 DNM1P46Q6ZS02 220 aa8.76□□□□□ -1.01
TRAFD1-208ENST00000552890 THAP5Q7Z6K1 395 aa8.76□□□□□ -1.01
TRAFD1-208ENST00000552890 LRP11Q86VZ4 500 aa8.76□□□□□ -1.01
TRAFD1-208ENST00000552890 ENTHD1Q8IYW4 607 aa8.76□□□□□ -1.01
TRAFD1-208ENST00000552890 SYS1Q8N2H4 156 aa8.76□□□□□ -1.01
TRAFD1-208ENST00000552890 YIPF7Q8N8F6 280 aa8.76□□□□□ -1.01
TRAFD1-208ENST00000552890 OR2Z1Q8NG97 314 aa8.76□□□□□ -1.01
TRAFD1-208ENST00000552890 OR10S1Q8NGN2 331 aa8.76□□□□□ -1.01
TRAFD1-208ENST00000552890 C10orf105Q8TEF2 133 aa8.76□□□□□ -1.01
TRAFD1-208ENST00000552890 SLC7A6Q92536 515 aa8.76□□□□□ -1.01
TRAFD1-208ENST00000552890 RNFT2Q96EX2 444 aa8.76□□□□□ -1.01
TRAFD1-208ENST00000552890 MBOAT4Q96T53 435 aa8.76□□□□□ -1.01
TRAFD1-208ENST00000552890 TMUB1Q9BVT8 246 aa8.76□□□□□ -1.01
TRAFD1-208ENST00000552890 REG4Q9BYZ8 158 aa8.76□□□□□ -1.01
TRAFD1-208ENST00000552890 SCN3BQ9NY72 215 aa8.76□□□□□ -1.01
TRAFD1-208ENST00000552890 CNOT2Q9NZN8 540 aaKnown RBP8.76□□□□□ -1.01
TRAFD1-208ENST00000552890 FZR1Q9UM11 496 aa8.76□□□□□ -1.01
TRAFD1-208ENST00000552890 PPP1R3CQ9UQK1 317 aa8.76□□□□□ -1.01
TRAFD1-208ENST00000552890 EXOGQ9Y2C4 368 aaKnown RBP8.76□□□□□ -1.01
TRAFD1-208ENST00000552890 EXOSC1Q9Y3B2 195 aaKnown RBP8.76□□□□□ -1.01
TRAFD1-208ENST00000552890 R4GMQ9 66 aa8.76□□□□□ -1.01
TRAFD1-208ENST00000552890 OTOGQ6ZRI0 2925 aa8.76□□□□□ -1.01
TRAFD1-208ENST00000552890 SPRY3O43610 288 aa8.75□□□□□ -1.01
TRAFD1-208ENST00000552890 IGHV1-46P01743 117 aa8.75□□□□□ -1.01
TRAFD1-208ENST00000552890 MRPL3P09001 348 aaKnown RBP8.75□□□□□ -1.01
TRAFD1-208ENST00000552890 CCDC159P0C7I6 412 aa8.75□□□□□ -1.01
TRAFD1-208ENST00000552890 MPV17P39210 176 aa8.75□□□□□ -1.01
TRAFD1-208ENST00000552890 RPS27P42677 84 aaKnown RBP8.75□□□□□ -1.01
TRAFD1-208ENST00000552890 NR4A2P43354 598 aa8.75□□□□□ -1.01
TRAFD1-208ENST00000552890 GATA4P43694 442 aa8.75□□□□□ -1.01
TRAFD1-208ENST00000552890 GPR6P46095 362 aaPredicted RBP8.75□□□□□ -1.01
TRAFD1-208ENST00000552890 GZMKP49863 264 aa8.75□□□□□ -1.01
TRAFD1-208ENST00000552890 CCR9P51686 369 aa8.75□□□□□ -1.01
TRAFD1-208ENST00000552890 ERVS71-1P61550 626 aa8.75□□□□□ -1.01
TRAFD1-208ENST00000552890 ADARB1P78563 741 aaKnown RBP8.75□□□□□ -1.01
TRAFD1-208ENST00000552890 ZNF92Q03936 586 aa8.75□□□□□ -1.01
TRAFD1-208ENST00000552890 GALEQ14376 348 aa8.75□□□□□ -1.01
TRAFD1-208ENST00000552890 TMEM244Q5VVB8 128 aa8.75□□□□□ -1.01
TRAFD1-208ENST00000552890 OR2T2Q6IF00 324 aa8.75□□□□□ -1.01
TRAFD1-208ENST00000552890 LYPD4Q6UWN0 246 aa8.75□□□□□ -1.01
TRAFD1-208ENST00000552890 FAM57BQ71RH2 274 aa8.75□□□□□ -1.01
TRAFD1-208ENST00000552890 SPATC1Q76KD6 591 aa8.75□□□□□ -1.01
TRAFD1-208ENST00000552890 COMMD2Q86X83 199 aa8.75□□□□□ -1.01
TRAFD1-208ENST00000552890 MUC20Q8N307 709 aaPredicted RBP8.75□□□□□ -1.01
TRAFD1-208ENST00000552890 OR8S1Q8NH09 359 aa8.75□□□□□ -1.01
TRAFD1-208ENST00000552890 THRSPQ92748 146 aa8.75□□□□□ -1.01
TRAFD1-208ENST00000552890 RAB39BQ96DA2 213 aa8.75□□□□□ -1.01
TRAFD1-208ENST00000552890 COX4I2Q96KJ9 171 aa8.75□□□□□ -1.01
TRAFD1-208ENST00000552890 MICU1Q9BPX6 476 aa8.75□□□□□ -1.01
TRAFD1-208ENST00000552890 JAM3Q9BX67 310 aa8.75□□□□□ -1.01
TRAFD1-208ENST00000552890 FN3KRPQ9HA64 309 aa8.75□□□□□ -1.01
TRAFD1-208ENST00000552890 BLOC1S6Q9UL45 172 aa8.75□□□□□ -1.01
TRAFD1-208ENST00000552890 F8P00451 2351 aa8.75□□□□□ -1.01
TRAFD1-208ENST00000552890 FLNAP21333 2647 aaKnown RBP8.74□□□□□ -1.01
TRAFD1-208ENST00000552890 CSMD1Q96PZ7 3565 aa8.74□□□□□ -1.01
TRAFD1-208ENST00000552890 ZNF816-ZNF321PA0A0X1KG74 233 aa8.74□□□□□ -1.01
TRAFD1-208ENST00000552890 A0A1B0GVI7 797 aa8.74□□□□□ -1.01
TRAFD1-208ENST00000552890 A0A1W2PQL4 384 aaPredicted RBP8.74□□□□□ -1.01
TRAFD1-208ENST00000552890 TMEM210A6NLX4 147 aa8.74□□□□□ -1.01
TRAFD1-208ENST00000552890 ANKRD65E5RJM6 399 aa8.74□□□□□ -1.01
TRAFD1-208ENST00000552890 NDUFA2O43678 99 aa8.74□□□□□ -1.01
TRAFD1-208ENST00000552890 DBTP11182 482 aaKnown RBP8.74□□□□□ -1.01
TRAFD1-208ENST00000552890 PIPP12273 146 aaPredicted RBP8.74□□□□□ -1.01
TRAFD1-208ENST00000552890 GABRB1P18505 474 aa8.74□□□□□ -1.01
TRAFD1-208ENST00000552890 CD200P41217 278 aa8.74□□□□□ -1.01
TRAFD1-208ENST00000552890 GSK3AP49840 483 aa8.74□□□□□ -1.01
TRAFD1-208ENST00000552890 GBX2P52951 348 aaPredicted RBP8.74□□□□□ -1.01
TRAFD1-208ENST00000552890 TAS2R43P59537 309 aa8.74□□□□□ -1.01
TRAFD1-208ENST00000552890 ZNF91Q05481 1191 aa8.74□□□□□ -1.01
TRAFD1-208ENST00000552890 TNK1Q13470 666 aa8.74□□□□□ -1.01
TRAFD1-208ENST00000552890 HLXQ14774 488 aaPredicted RBP8.74□□□□□ -1.01
TRAFD1-208ENST00000552890 MAD2L1BPQ15013 274 aaPredicted RBP8.74□□□□□ -1.01
TRAFD1-208ENST00000552890 OR8B8Q15620 311 aa8.74□□□□□ -1.01
TRAFD1-208ENST00000552890 CCDC58Q4VC31 144 aa8.74□□□□□ -1.01
TRAFD1-208ENST00000552890 GLYATL3Q5SZD4 288 aa8.74□□□□□ -1.01
TRAFD1-208ENST00000552890 FDX2Q6P4F2 183 aa8.74□□□□□ -1.01
TRAFD1-208ENST00000552890 DOK3Q7L591 496 aa8.74□□□□□ -1.01
TRAFD1-208ENST00000552890 ELMOD2Q8IZ81 293 aa8.74□□□□□ -1.01
TRAFD1-208ENST00000552890 SPICQ8N5J4 248 aa8.74□□□□□ -1.01
TRAFD1-208ENST00000552890 ZNF525Q8N782 197 aa8.74□□□□□ -1.01
TRAFD1-208ENST00000552890 WFDC11Q8NEX6 87 aa8.74□□□□□ -1.01
TRAFD1-208ENST00000552890 SEMA6DQ8NFY4 1073 aa8.74□□□□□ -1.01
TRAFD1-208ENST00000552890 TFAP2CQ92754 450 aa8.74□□□□□ -1.01
TRAFD1-208ENST00000552890 CPNE2Q96FN4 548 aaPredicted RBP8.74□□□□□ -1.01
TRAFD1-208ENST00000552890 PBOV1Q9GZY1 135 aa8.74□□□□□ -1.01
TRAFD1-208ENST00000552890 TPK1Q9H3S4 243 aa8.74□□□□□ -1.01
TRAFD1-208ENST00000552890 PLEKHA1Q9HB21 404 aa8.74□□□□□ -1.01
TRAFD1-208ENST00000552890 MSL2Q9HCI7 577 aa8.74□□□□□ -1.01
TRAFD1-208ENST00000552890 PLCXD1Q9NUJ7 323 aa8.74□□□□□ -1.01
TRAFD1-208ENST00000552890 MYEF2Q9P2K5 600 aaKnown RBP8.74□□□□□ -1.01
TRAFD1-208ENST00000552890 ENPP5Q9UJA9 477 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms