RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 CD55P08174 381 aa5.13□□□□□ -1.59
VPS29-210ENST00000552130 FCGR3AP08637 254 aa5.13□□□□□ -1.59
VPS29-210ENST00000552130 TCP1P17987 556 aaKnown RBP5.13□□□□□ -1.59
VPS29-210ENST00000552130 ALOX5APP20292 161 aa5.13□□□□□ -1.59
VPS29-210ENST00000552130 CEACAM8P31997 349 aaPredicted RBP5.13□□□□□ -1.59
VPS29-210ENST00000552130 CCKARP32238 428 aa5.13□□□□□ -1.59
VPS29-210ENST00000552130 EFNA3P52797 238 aa5.13□□□□□ -1.59
VPS29-210ENST00000552130 AP1S2P56377 157 aa5.13□□□□□ -1.59
VPS29-210ENST00000552130 GAGE5Q13069 117 aa5.13□□□□□ -1.59
VPS29-210ENST00000552130 GAGE6Q13070 117 aa5.13□□□□□ -1.59
VPS29-210ENST00000552130 EIF4EBP2Q13542 120 aaPredicted RBP5.13□□□□□ -1.59
VPS29-210ENST00000552130 CLINT1Q14677 625 aa5.13□□□□□ -1.59
VPS29-210ENST00000552130 P2RY6Q15077 328 aa5.13□□□□□ -1.59
VPS29-210ENST00000552130 C4orf26Q17RF5 130 aa5.13□□□□□ -1.59
VPS29-210ENST00000552130 CEACAM21Q3KPI0 293 aa5.13□□□□□ -1.59
VPS29-210ENST00000552130 LINC00242Q5T6M2 205 aa5.13□□□□□ -1.59
VPS29-210ENST00000552130 UBE2UQ5VVX9 321 aa5.13□□□□□ -1.59
VPS29-210ENST00000552130 ZNF626Q68DY1 528 aa5.13□□□□□ -1.59
VPS29-210ENST00000552130 REP15Q6BDI9 236 aa5.13□□□□□ -1.59
VPS29-210ENST00000552130 TMEM144Q7Z5S9 345 aa5.13□□□□□ -1.59
VPS29-210ENST00000552130 APLFQ8IW19 511 aaPredicted RBP5.13□□□□□ -1.59
VPS29-210ENST00000552130 SLC30A8Q8IWU4 369 aa5.13□□□□□ -1.59
VPS29-210ENST00000552130 ZNF114Q8NC26 417 aa5.13□□□□□ -1.59
VPS29-210ENST00000552130 PRSS33Q8NF86 280 aa5.13□□□□□ -1.59
VPS29-210ENST00000552130 ZMYND19Q96E35 227 aaPredicted RBP5.13□□□□□ -1.59
VPS29-210ENST00000552130 IMP4Q96G21 291 aaKnown RBP5.13□□□□□ -1.59
VPS29-210ENST00000552130 ZIM3Q96PE6 472 aa5.13□□□□□ -1.59
VPS29-210ENST00000552130 C20orf144Q9BQM9 153 aa5.13□□□□□ -1.59
VPS29-210ENST00000552130 MYOZ1Q9NP98 299 aaPredicted RBP5.13□□□□□ -1.59
VPS29-210ENST00000552130 EXOSC4Q9NPD3 245 aaKnown RBP5.13□□□□□ -1.59
VPS29-210ENST00000552130 POU2F3Q9UKI9 436 aa5.13□□□□□ -1.59
VPS29-210ENST00000552130 ROCK2O75116 1388 aaKnown RBP5.13□□□□□ -1.59
VPS29-210ENST00000552130 KIF24Q5T7B8 1368 aa5.13□□□□□ -1.59
VPS29-210ENST00000552130 IGHV4-61A0A0C4DH41 118 aa5.12□□□□□ -1.59
VPS29-210ENST00000552130 A0A1B0GWB2 263 aa5.12□□□□□ -1.59
VPS29-210ENST00000552130 F6UB75 175 aa5.12□□□□□ -1.59
VPS29-210ENST00000552130 OR2B3O76000 313 aa5.12□□□□□ -1.59
VPS29-210ENST00000552130 SLC2A10O95528 541 aa5.12□□□□□ -1.59
VPS29-210ENST00000552130 IGHV4-59P01825 116 aa5.12□□□□□ -1.59
VPS29-210ENST00000552130 PCCAP05165 728 aaPredicted RBP5.12□□□□□ -1.59
VPS29-210ENST00000552130 KLK3P07288 261 aaPredicted RBP5.12□□□□□ -1.59
VPS29-210ENST00000552130 CST2P09228 141 aa5.12□□□□□ -1.59
VPS29-210ENST00000552130 ADORA1P30542 326 aa5.12□□□□□ -1.59
VPS29-210ENST00000552130 GABRA4P48169 554 aa5.12□□□□□ -1.59
VPS29-210ENST00000552130 SULT1A1P50225 295 aa5.12□□□□□ -1.59
VPS29-210ENST00000552130 SULT1A2P50226 295 aa5.12□□□□□ -1.59
VPS29-210ENST00000552130 BIDP55957 195 aa5.12□□□□□ -1.59
VPS29-210ENST00000552130 DLX1P56177 255 aa5.12□□□□□ -1.59
VPS29-210ENST00000552130 KRTAP10-6P60371 365 aaPredicted RBP5.12□□□□□ -1.59
VPS29-210ENST00000552130 ARG2P78540 354 aa5.12□□□□□ -1.59
VPS29-210ENST00000552130 MRPS11P82912 194 aaKnown RBP5.12□□□□□ -1.59
VPS29-210ENST00000552130 OR2F1Q13607 317 aa5.12□□□□□ -1.59
VPS29-210ENST00000552130 FASTKQ14296 549 aaKnown RBP5.12□□□□□ -1.59
VPS29-210ENST00000552130 NECTIN1Q15223 517 aa5.12□□□□□ -1.59
VPS29-210ENST00000552130 OR7A5Q15622 319 aa5.12□□□□□ -1.59
VPS29-210ENST00000552130 PARP15Q460N3 678 aa5.12□□□□□ -1.59
VPS29-210ENST00000552130 OLFML2AQ68BL7 652 aa5.12□□□□□ -1.59
VPS29-210ENST00000552130 ZNF788Q6ZQV5 615 aa5.12□□□□□ -1.59
VPS29-210ENST00000552130 DAW1Q8N136 415 aa5.12□□□□□ -1.59
VPS29-210ENST00000552130 PNKDQ8N490 385 aa5.12□□□□□ -1.59
VPS29-210ENST00000552130 SAMD12Q8N8I0 201 aa5.12□□□□□ -1.59
VPS29-210ENST00000552130 GPR32P1Q8NGA4 272 aa5.12□□□□□ -1.59
VPS29-210ENST00000552130 OR2A1Q8NGT9 310 aa5.12□□□□□ -1.59
VPS29-210ENST00000552130 OR51E1Q8TCB6 317 aa5.12□□□□□ -1.59
VPS29-210ENST00000552130 MAPK15Q8TD08 544 aa5.12□□□□□ -1.59
VPS29-210ENST00000552130 MED8Q96G25 268 aa5.12□□□□□ -1.59
VPS29-210ENST00000552130 SFRP2Q96HF1 295 aa5.12□□□□□ -1.59
VPS29-210ENST00000552130 OR10C1Q96KK4 312 aa5.12□□□□□ -1.59
VPS29-210ENST00000552130 P2RX4Q99571 388 aa5.12□□□□□ -1.59
VPS29-210ENST00000552130 TIPINQ9BVW5 301 aa5.12□□□□□ -1.59
VPS29-210ENST00000552130 PECRQ9BY49 303 aa5.12□□□□□ -1.59
VPS29-210ENST00000552130 BOLA2Q9H3K6 86 aa5.12□□□□□ -1.59
VPS29-210ENST00000552130 CLMPQ9H6B4 373 aa5.12□□□□□ -1.59
VPS29-210ENST00000552130 UGT1A8Q9HAW9 530 aa5.12□□□□□ -1.59
VPS29-210ENST00000552130 EXOSC3Q9NQT5 275 aaKnown RBP5.12□□□□□ -1.59
VPS29-210ENST00000552130 MRPS18CQ9Y3D5 142 aaKnown RBP5.12□□□□□ -1.59
VPS29-210ENST00000552130 TGIF2-C20orf24A0A0A6YYL0 155 aa5.11□□□□□ -1.59
VPS29-210ENST00000552130 CENPVL3A0A0U1RRI6 287 aa5.11□□□□□ -1.59
VPS29-210ENST00000552130 IQCMA0A1B0GVH7 501 aa5.11□□□□□ -1.59
VPS29-210ENST00000552130 FAM240AA0A1B0GVK7 77 aa5.11□□□□□ -1.59
VPS29-210ENST00000552130 DAPL1A0PJW8 107 aa5.11□□□□□ -1.59
VPS29-210ENST00000552130 VPS37CA5D8V6 355 aaPredicted RBP5.11□□□□□ -1.59
VPS29-210ENST00000552130 A6NDN8 102 aa5.11□□□□□ -1.59
VPS29-210ENST00000552130 CLDN24A6NM45 220 aa5.11□□□□□ -1.59
VPS29-210ENST00000552130 NCBP2LA6PVI3 153 aaKnown RBP5.11□□□□□ -1.59
VPS29-210ENST00000552130 CEACAM18A8MTB9 384 aa5.11□□□□□ -1.59
VPS29-210ENST00000552130 F5H5K5 113 aa5.11□□□□□ -1.59
VPS29-210ENST00000552130 TNFRSF11BO00300 401 aa5.11□□□□□ -1.59
VPS29-210ENST00000552130 TAAR5O14804 337 aa5.11□□□□□ -1.59
VPS29-210ENST00000552130 NUPL2O15504 423 aaKnown RBP5.11□□□□□ -1.59
VPS29-210ENST00000552130 FAM189A1O60320 539 aa5.11□□□□□ -1.59
VPS29-210ENST00000552130 UGT2B11O75310 529 aa5.11□□□□□ -1.59
VPS29-210ENST00000552130 RBMY1CP0DJD4 496 aa5.11□□□□□ -1.59
VPS29-210ENST00000552130 IGHV4-38-2P0DP08 117 aa5.11□□□□□ -1.59
VPS29-210ENST00000552130 CD1DP15813 335 aa5.11□□□□□ -1.59
VPS29-210ENST00000552130 USF1P22415 310 aaPredicted RBP5.11□□□□□ -1.59
VPS29-210ENST00000552130 SHC1P29353 583 aa5.11□□□□□ -1.59
VPS29-210ENST00000552130 RPL12P30050 165 aaKnown RBP5.11□□□□□ -1.59
VPS29-210ENST00000552130 GPX4P36969 197 aaPredicted RBP5.11□□□□□ -1.59
VPS29-210ENST00000552130 RPL5P46777 297 aaKnown RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms