RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 FKBP9P1Q75LS8 142 aa8.1□□□□□ -1.11
TRAFD1-207ENST00000550051 MRPL21Q7Z2W9 205 aaKnown RBP8.1□□□□□ -1.11
TRAFD1-207ENST00000550051 REC114Q7Z4M0 266 aa8.1□□□□□ -1.11
TRAFD1-207ENST00000550051 ZBTB46Q86UZ6 589 aa8.1□□□□□ -1.11
TRAFD1-207ENST00000550051 CYP4Z1Q86W10 505 aa8.1□□□□□ -1.11
TRAFD1-207ENST00000550051 FAM90A1Q86YD7 464 aa8.1□□□□□ -1.11
TRAFD1-207ENST00000550051 GALNT4Q8N4A0 578 aa8.1□□□□□ -1.11
TRAFD1-207ENST00000550051 GCSAMQ8N6F7 178 aa8.1□□□□□ -1.11
TRAFD1-207ENST00000550051 BOLLQ8N9W6 283 aaKnown RBP8.1□□□□□ -1.11
TRAFD1-207ENST00000550051 SAR1AQ9NR31 198 aa8.1□□□□□ -1.11
TRAFD1-207ENST00000550051 C1orf123Q9NWV4 160 aa8.1□□□□□ -1.11
TRAFD1-207ENST00000550051 CMTM6Q9NX76 183 aa8.1□□□□□ -1.11
TRAFD1-207ENST00000550051 MRPL15Q9P015 296 aaKnown RBP8.1□□□□□ -1.11
TRAFD1-207ENST00000550051 VPREB3Q9UKI3 123 aa8.1□□□□□ -1.11
TRAFD1-207ENST00000550051 AURKCQ9UQB9 309 aa8.1□□□□□ -1.11
TRAFD1-207ENST00000550051 BTBD17A6NE02 478 aa8.09□□□□□ -1.11
TRAFD1-207ENST00000550051 G3V4G9 280 aa8.09□□□□□ -1.11
TRAFD1-207ENST00000550051 RNASEK-C17orf49H0YIS7 233 aa8.09□□□□□ -1.11
TRAFD1-207ENST00000550051 CXCR6O00574 342 aa8.09□□□□□ -1.11
TRAFD1-207ENST00000550051 ZNF682O95780 498 aa8.09□□□□□ -1.11
TRAFD1-207ENST00000550051 H1F0P07305 194 aaKnown RBP8.09□□□□□ -1.11
TRAFD1-207ENST00000550051 MUC1P15941 1255 aaPredicted RBP8.09□□□□□ -1.11
TRAFD1-207ENST00000550051 OTX1P32242 354 aaPredicted RBP8.09□□□□□ -1.11
TRAFD1-207ENST00000550051 EGR3Q06889 387 aa8.09□□□□□ -1.11
TRAFD1-207ENST00000550051 RFX4Q33E94 735 aa8.09□□□□□ -1.11
TRAFD1-207ENST00000550051 SAMD5Q5TGI4 173 aa8.09□□□□□ -1.11
TRAFD1-207ENST00000550051 DHRS7BQ6IAN0 325 aaPredicted RBP8.09□□□□□ -1.11
TRAFD1-207ENST00000550051 C11orf88Q6PI97 169 aa8.09□□□□□ -1.11
TRAFD1-207ENST00000550051 SMARCD3Q6STE5 483 aa8.09□□□□□ -1.11
TRAFD1-207ENST00000550051 Q6ZPA2 131 aa8.09□□□□□ -1.11
TRAFD1-207ENST00000550051 VMO1Q7Z5L0 202 aa8.09□□□□□ -1.11
TRAFD1-207ENST00000550051 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.09□□□□□ -1.11
TRAFD1-207ENST00000550051 C11orf53Q8IXP5 236 aa8.09□□□□□ -1.11
TRAFD1-207ENST00000550051 SLC15A3Q8IY34 581 aa8.09□□□□□ -1.11
TRAFD1-207ENST00000550051 OR2AJ1Q8NGZ0 328 aa8.09□□□□□ -1.11
TRAFD1-207ENST00000550051 OR5R1Q8NH85 324 aa8.09□□□□□ -1.11
TRAFD1-207ENST00000550051 SPTSSAQ969W0 71 aa8.09□□□□□ -1.11
TRAFD1-207ENST00000550051 RSRC1Q96IZ7 334 aaKnown RBP8.09□□□□□ -1.11
TRAFD1-207ENST00000550051 ERMAPQ96PL5 475 aaPredicted RBP8.09□□□□□ -1.11
TRAFD1-207ENST00000550051 FUZQ9BT04 418 aa8.09□□□□□ -1.11
TRAFD1-207ENST00000550051 ADAT1Q9BUB4 502 aaKnown RBP8.09□□□□□ -1.11
TRAFD1-207ENST00000550051 TMEM120AQ9BXJ8 343 aa8.09□□□□□ -1.11
TRAFD1-207ENST00000550051 RNPEPL1Q9HAU8 725 aa8.09□□□□□ -1.11
TRAFD1-207ENST00000550051 ZNRD1Q9P1U0 126 aa8.09□□□□□ -1.11
TRAFD1-207ENST00000550051 KCNG2Q9UJ96 466 aa8.09□□□□□ -1.11
TRAFD1-207ENST00000550051 GGT3PA6NGU5 568 aa8.08□□□□□ -1.12
TRAFD1-207ENST00000550051 UNC119BA6NIH7 251 aa8.08□□□□□ -1.12
TRAFD1-207ENST00000550051 HMGB1P1B2RPK0 211 aaPredicted RBP8.08□□□□□ -1.12
TRAFD1-207ENST00000550051 M0R135 149 aa8.08□□□□□ -1.12
TRAFD1-207ENST00000550051 NPFFO15130 113 aa8.08□□□□□ -1.12
TRAFD1-207ENST00000550051 IDH3BO43837 385 aa8.08□□□□□ -1.12
TRAFD1-207ENST00000550051 RENP00797 406 aa8.08□□□□□ -1.12
TRAFD1-207ENST00000550051 GRPP07492 148 aa8.08□□□□□ -1.12
TRAFD1-207ENST00000550051 SNRPBP14678 240 aaKnown RBP8.08□□□□□ -1.12
TRAFD1-207ENST00000550051 RHCEP18577 417 aa8.08□□□□□ -1.12
TRAFD1-207ENST00000550051 DDOSTP39656 456 aa8.08□□□□□ -1.12
TRAFD1-207ENST00000550051 KIR2DS4P43632 304 aa8.08□□□□□ -1.12
TRAFD1-207ENST00000550051 LIPEQ05469 1076 aa8.08□□□□□ -1.12
TRAFD1-207ENST00000550051 HERPUD1Q15011 391 aa8.08□□□□□ -1.12
TRAFD1-207ENST00000550051 SNAI3Q3KNW1 292 aa8.08□□□□□ -1.12
TRAFD1-207ENST00000550051 ATPAF1Q5TC12 328 aaPredicted RBP8.08□□□□□ -1.12
TRAFD1-207ENST00000550051 DRAM2Q6UX65 266 aa8.08□□□□□ -1.12
TRAFD1-207ENST00000550051 ZNF826PQ6ZT77 177 aa8.08□□□□□ -1.12
TRAFD1-207ENST00000550051 ARPINQ7Z6K5 226 aa8.08□□□□□ -1.12
TRAFD1-207ENST00000550051 LINC00346Q8IVM7 164 aa8.08□□□□□ -1.12
TRAFD1-207ENST00000550051 PDZD9Q8IXQ8 264 aa8.08□□□□□ -1.12
TRAFD1-207ENST00000550051 CMTM4Q8IZR5 234 aa8.08□□□□□ -1.12
TRAFD1-207ENST00000550051 Q8N7P7 452 aa8.08□□□□□ -1.12
TRAFD1-207ENST00000550051 C8orf46Q8TAG6 207 aa8.08□□□□□ -1.12
TRAFD1-207ENST00000550051 CFHR4Q92496 578 aa8.08□□□□□ -1.12
TRAFD1-207ENST00000550051 ZNF799Q96GE5 643 aa8.08□□□□□ -1.12
TRAFD1-207ENST00000550051 MAP6Q96JE9 813 aa8.08□□□□□ -1.12
TRAFD1-207ENST00000550051 HSH2DQ96JZ2 352 aa8.08□□□□□ -1.12
TRAFD1-207ENST00000550051 DHRS1Q96LJ7 313 aa8.08□□□□□ -1.12
TRAFD1-207ENST00000550051 NMNAT3Q96T66 252 aa8.08□□□□□ -1.12
TRAFD1-207ENST00000550051 C14orf119Q9NWQ9 140 aa8.08□□□□□ -1.12
TRAFD1-207ENST00000550051 NDUFAF4Q9P032 175 aa8.08□□□□□ -1.12
TRAFD1-207ENST00000550051 PRPF19Q9UMS4 504 aaKnown RBP8.08□□□□□ -1.12
TRAFD1-207ENST00000550051 FAM32AQ9Y421 112 aaKnown RBP8.08□□□□□ -1.12
TRAFD1-207ENST00000550051 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.07□□□□□ -1.12
TRAFD1-207ENST00000550051 TRBV4-1A0A0J9YWV2 114 aa8.07□□□□□ -1.12
TRAFD1-207ENST00000550051 OR6C68A6NDL8 312 aa8.07□□□□□ -1.12
TRAFD1-207ENST00000550051 BHLHE40O14503 412 aa8.07□□□□□ -1.12
TRAFD1-207ENST00000550051 SLC22A2O15244 555 aa8.07□□□□□ -1.12
TRAFD1-207ENST00000550051 SERPINA1P01009 418 aa8.07□□□□□ -1.12
TRAFD1-207ENST00000550051 HIST1H1CP16403 213 aaKnown RBP8.07□□□□□ -1.12
TRAFD1-207ENST00000550051 EEF1B2P24534 225 aaKnown RBP8.07□□□□□ -1.12
TRAFD1-207ENST00000550051 NOS3P29474 1203 aa8.07□□□□□ -1.12
TRAFD1-207ENST00000550051 SLC6A6P31641 620 aa8.07□□□□□ -1.12
TRAFD1-207ENST00000550051 GRK5P34947 590 aa8.07□□□□□ -1.12
TRAFD1-207ENST00000550051 TGM4P49221 684 aa8.07□□□□□ -1.12
TRAFD1-207ENST00000550051 ACSM1Q08AH1 577 aa8.07□□□□□ -1.12
TRAFD1-207ENST00000550051 SEC23BQ15437 767 aa8.07□□□□□ -1.12
TRAFD1-207ENST00000550051 MICBQ29980 383 aa8.07□□□□□ -1.12
TRAFD1-207ENST00000550051 GLYATL3Q5SZD4 288 aa8.07□□□□□ -1.12
TRAFD1-207ENST00000550051 Q6ZTK2 550 aa8.07□□□□□ -1.12
TRAFD1-207ENST00000550051 SLC36A1Q7Z2H8 476 aa8.07□□□□□ -1.12
TRAFD1-207ENST00000550051 OR4K13Q8NH42 304 aa8.07□□□□□ -1.12
TRAFD1-207ENST00000550051 ST8SIA4Q92187 359 aa8.07□□□□□ -1.12
TRAFD1-207ENST00000550051 TNFRSF14Q92956 283 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms