RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 GMDSO60547 372 aa7.02□□□□□ -1.29
TROAP-208ENST00000548817 CIB2O75838 187 aa7.02□□□□□ -1.29
TROAP-208ENST00000548817 PPP1R3DO95685 299 aa7.02□□□□□ -1.29
TROAP-208ENST00000548817 TXNDC12O95881 172 aa7.02□□□□□ -1.29
TROAP-208ENST00000548817 ECDO95905 644 aaPredicted RBP7.02□□□□□ -1.29
TROAP-208ENST00000548817 ZNF823P16415 610 aa7.02□□□□□ -1.29
TROAP-208ENST00000548817 CA6P23280 308 aa7.02□□□□□ -1.29
TROAP-208ENST00000548817 SLC6A6P31641 620 aa7.02□□□□□ -1.29
TROAP-208ENST00000548817 CFHR2P36980 270 aa7.02□□□□□ -1.29
TROAP-208ENST00000548817 PMELP40967 661 aa7.02□□□□□ -1.29
TROAP-208ENST00000548817 CDKN2AP42771 156 aaKnown RBP7.02□□□□□ -1.29
TROAP-208ENST00000548817 SMIM11AP58511 58 aa7.02□□□□□ -1.29
TROAP-208ENST00000548817 HIST1H3AP68431 136 aa7.02□□□□□ -1.29
TROAP-208ENST00000548817 SF3A3Q12874 501 aaKnown RBP eCLIP7.02□□□□□ -1.292e-7■■■■■ 49.4
TROAP-208ENST00000548817 COX10Q12887 443 aa7.02□□□□□ -1.29
TROAP-208ENST00000548817 GK2Q14410 553 aaPredicted RBP7.02□□□□□ -1.29
TROAP-208ENST00000548817 TAF13Q15543 124 aa7.02□□□□□ -1.29
TROAP-208ENST00000548817 MEP1BQ16820 701 aa7.02□□□□□ -1.29
TROAP-208ENST00000548817 KLHL22Q53GT1 634 aa7.02□□□□□ -1.29
TROAP-208ENST00000548817 HIST2H3PS2Q5TEC6 136 aa7.02□□□□□ -1.29
TROAP-208ENST00000548817 PRAMEF6Q5VXH4 476 aa7.02□□□□□ -1.29
TROAP-208ENST00000548817 SFRP4Q6FHJ7 346 aaPredicted RBP7.02□□□□□ -1.29
TROAP-208ENST00000548817 SMARCD3Q6STE5 483 aa7.02□□□□□ -1.29
TROAP-208ENST00000548817 GDPGP1Q6ZNW5 385 aa7.02□□□□□ -1.29
TROAP-208ENST00000548817 PTCHD4Q6ZW05 846 aa7.02□□□□□ -1.29
TROAP-208ENST00000548817 HIST2H3AQ71DI3 136 aa7.02□□□□□ -1.29
TROAP-208ENST00000548817 LINC00346Q8IVM7 164 aa7.02□□□□□ -1.29
TROAP-208ENST00000548817 ZSCAN4Q8NAM6 433 aaPredicted RBP7.02□□□□□ -1.29
TROAP-208ENST00000548817 PLPP7Q8NBV4 271 aa7.02□□□□□ -1.29
TROAP-208ENST00000548817 C19orf18Q8NEA5 215 aa7.02□□□□□ -1.29
TROAP-208ENST00000548817 RP9Q8TA86 221 aaKnown RBP7.02□□□□□ -1.29
TROAP-208ENST00000548817 SLC7A13Q8TCU3 470 aa7.02□□□□□ -1.29
TROAP-208ENST00000548817 LRTOMTQ8WZ04 291 aa7.02□□□□□ -1.29
TROAP-208ENST00000548817 STMN2Q93045 179 aa7.02□□□□□ -1.29
TROAP-208ENST00000548817 LHX4Q969G2 390 aa7.02□□□□□ -1.29
TROAP-208ENST00000548817 DACT3Q96B18 629 aaPredicted RBP7.02□□□□□ -1.29
TROAP-208ENST00000548817 WDFY2Q96P53 400 aa7.02□□□□□ -1.29
TROAP-208ENST00000548817 TSSK2Q96PF2 358 aa7.02□□□□□ -1.29
TROAP-208ENST00000548817 GPX7Q96SL4 187 aaPredicted RBP7.02□□□□□ -1.29
TROAP-208ENST00000548817 ATF6BQ99941 703 aa7.02□□□□□ -1.29
TROAP-208ENST00000548817 HOPXQ9BPY8 73 aaPredicted RBP7.02□□□□□ -1.29
TROAP-208ENST00000548817 BTBD10Q9BSF8 475 aa7.02□□□□□ -1.29
TROAP-208ENST00000548817 ACOXLQ9NUZ1 547 aa7.02□□□□□ -1.29
TROAP-208ENST00000548817 CMTM6Q9NX76 183 aa7.02□□□□□ -1.29
TROAP-208ENST00000548817 B9D1Q9UPM9 204 aa7.02□□□□□ -1.29
TROAP-208ENST00000548817 SIGLEC7Q9Y286 467 aa7.02□□□□□ -1.29
TROAP-208ENST00000548817 LHFPL6Q9Y693 200 aa7.02□□□□□ -1.29
TROAP-208ENST00000548817 IGHV1-69DA0A0B4J2H0 117 aa7.01□□□□□ -1.29
TROAP-208ENST00000548817 CENPVL3A0A0U1RRI6 287 aa7.01□□□□□ -1.29
TROAP-208ENST00000548817 hCG_1807616A0A1W2PRN6 198 aa7.01□□□□□ -1.29
TROAP-208ENST00000548817 A0A1W2PRQ8 180 aa7.01□□□□□ -1.29
TROAP-208ENST00000548817 A6NLC8 198 aa7.01□□□□□ -1.29
TROAP-208ENST00000548817 CD300LBA8K4G0 201 aa7.01□□□□□ -1.29
TROAP-208ENST00000548817 C22orf46C9J442 243 aa7.01□□□□□ -1.29
TROAP-208ENST00000548817 GPR137BO60478 399 aa7.01□□□□□ -1.29
TROAP-208ENST00000548817 IGHV1-69P01742 117 aa7.01□□□□□ -1.29
TROAP-208ENST00000548817 GRPP07492 148 aa7.01□□□□□ -1.29
TROAP-208ENST00000548817 SFTPBP07988 381 aa7.01□□□□□ -1.29
TROAP-208ENST00000548817 ACSM4P0C7M7 580 aa7.01□□□□□ -1.29
TROAP-208ENST00000548817 ZNF26P17031 533 aaPredicted RBP7.01□□□□□ -1.29
TROAP-208ENST00000548817 RHCEP18577 417 aa7.01□□□□□ -1.29
TROAP-208ENST00000548817 EEF1B2P24534 225 aaKnown RBP7.01□□□□□ -1.29
TROAP-208ENST00000548817 IFNGR2P38484 337 aa7.01□□□□□ -1.29
TROAP-208ENST00000548817 PSMB10P40306 273 aa7.01□□□□□ -1.29
TROAP-208ENST00000548817 SLC7A2P52569 658 aa7.01□□□□□ -1.29
TROAP-208ENST00000548817 ARF6P62330 175 aa7.01□□□□□ -1.29
TROAP-208ENST00000548817 TRAP1Q12931 704 aaKnown RBP7.01□□□□□ -1.29
TROAP-208ENST00000548817 MAB21L1Q13394 359 aa7.01□□□□□ -1.29
TROAP-208ENST00000548817 DGCR6Q14129 220 aa7.01□□□□□ -1.29
TROAP-208ENST00000548817 MPPED2Q15777 294 aa7.01□□□□□ -1.29
TROAP-208ENST00000548817 C11orf91Q3C1V1 193 aa7.01□□□□□ -1.29
TROAP-208ENST00000548817 CGB2Q6NT52 195 aa7.01□□□□□ -1.29
TROAP-208ENST00000548817 CCBE1Q6UXH8 406 aaPredicted RBP7.01□□□□□ -1.29
TROAP-208ENST00000548817 ZNF841Q6ZN19 808 aa7.01□□□□□ -1.29
TROAP-208ENST00000548817 COLCA1Q6ZS62 124 aa7.01□□□□□ -1.29
TROAP-208ENST00000548817 TSEN54Q7Z6J9 526 aaKnown RBP7.01□□□□□ -1.29
TROAP-208ENST00000548817 SLC15A3Q8IY34 581 aa7.01□□□□□ -1.29
TROAP-208ENST00000548817 CMTM4Q8IZR5 234 aa7.01□□□□□ -1.29
TROAP-208ENST00000548817 OR4C15Q8NGM1 316 aa7.01□□□□□ -1.29
TROAP-208ENST00000548817 OR52J3Q8NH60 311 aa7.01□□□□□ -1.29
TROAP-208ENST00000548817 FANK1Q8TC84 345 aa7.01□□□□□ -1.29
TROAP-208ENST00000548817 KCTD14Q9BQ13 255 aaPredicted RBP7.01□□□□□ -1.29
TROAP-208ENST00000548817 ADAT1Q9BUB4 502 aaKnown RBP7.01□□□□□ -1.29
TROAP-208ENST00000548817 IFT27Q9BW83 186 aa7.01□□□□□ -1.29
TROAP-208ENST00000548817 EFCAB1Q9HAE3 211 aa7.01□□□□□ -1.29
TROAP-208ENST00000548817 RNPEPL1Q9HAU8 725 aa7.01□□□□□ -1.29
TROAP-208ENST00000548817 RPRD1BQ9NQG5 326 aaKnown RBP7.01□□□□□ -1.29
TROAP-208ENST00000548817 C14orf119Q9NWQ9 140 aa7.01□□□□□ -1.29
TROAP-208ENST00000548817 C1orf123Q9NWV4 160 aa7.01□□□□□ -1.29
TROAP-208ENST00000548817 KCNG2Q9UJ96 466 aa7.01□□□□□ -1.29
TROAP-208ENST00000548817 IGLV1-36A0A0B4J1U3 117 aa7□□□□□ -1.29
TROAP-208ENST00000548817 A0A1B0GWJ7 208 aa7□□□□□ -1.29
TROAP-208ENST00000548817 OOEPA6NGQ2 149 aa7□□□□□ -1.29
TROAP-208ENST00000548817 M0R135 149 aa7□□□□□ -1.29
TROAP-208ENST00000548817 IDH3BO43837 385 aa7□□□□□ -1.29
TROAP-208ENST00000548817 GYPAP02724 150 aa7□□□□□ -1.29
TROAP-208ENST00000548817 COX4I1P13073 169 aa7□□□□□ -1.29
TROAP-208ENST00000548817 GRK5P34947 590 aa7□□□□□ -1.29
TROAP-208ENST00000548817 OMPP47874 163 aa7□□□□□ -1.29
TROAP-208ENST00000548817 GSK3BP49841 420 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms