RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 UBA52P62987 128 aaKnown RBP5.6□□□□□ -1.51
SCAF11-211ENST00000547950 HOXA4Q00056 320 aaPredicted RBP5.6□□□□□ -1.51
SCAF11-211ENST00000547950 MS4A2Q01362 244 aa5.6□□□□□ -1.51
SCAF11-211ENST00000547950 BAMBIQ13145 260 aa5.6□□□□□ -1.51
SCAF11-211ENST00000547950 CRMP1Q14194 572 aa5.6□□□□□ -1.51
SCAF11-211ENST00000547950 MICAQ29983 383 aa5.6□□□□□ -1.51
SCAF11-211ENST00000547950 ZNF181Q2M3W8 571 aa5.6□□□□□ -1.51
SCAF11-211ENST00000547950 ZNF404Q494X3 552 aa5.6□□□□□ -1.51
SCAF11-211ENST00000547950 FAM98BQ52LJ0 330 aaKnown RBP5.6□□□□□ -1.51
SCAF11-211ENST00000547950 GLYATL3Q5SZD4 288 aa5.6□□□□□ -1.51
SCAF11-211ENST00000547950 ZNF770Q6IQ21 691 aaPredicted RBP5.6□□□□□ -1.51
SCAF11-211ENST00000547950 DRAM2Q6UX65 266 aa5.6□□□□□ -1.51
SCAF11-211ENST00000547950 LYPD2Q6UXB3 125 aa5.6□□□□□ -1.51
SCAF11-211ENST00000547950 LRRN1Q6UXK5 716 aa5.6□□□□□ -1.51
SCAF11-211ENST00000547950 RASSF6Q6ZTQ3 369 aa5.6□□□□□ -1.51
SCAF11-211ENST00000547950 NLRC3Q7RTR2 1065 aa5.6□□□□□ -1.51
SCAF11-211ENST00000547950 OR8B3Q8NGG8 313 aa5.6□□□□□ -1.51
SCAF11-211ENST00000547950 OR4C15Q8NGM1 316 aa5.6□□□□□ -1.51
SCAF11-211ENST00000547950 OR10S1Q8NGN2 331 aa5.6□□□□□ -1.51
SCAF11-211ENST00000547950 OR6K6Q8NGW6 343 aa5.6□□□□□ -1.51
SCAF11-211ENST00000547950 OR4Q3Q8NH05 313 aa5.6□□□□□ -1.51
SCAF11-211ENST00000547950 RAB40AQ8WXH6 277 aa5.6□□□□□ -1.51
SCAF11-211ENST00000547950 SLAMF6Q96DU3 332 aa5.6□□□□□ -1.51
SCAF11-211ENST00000547950 NEIL1Q96FI4 390 aaPredicted RBP5.6□□□□□ -1.51
SCAF11-211ENST00000547950 OR8B2Q96RD0 313 aa5.6□□□□□ -1.51
SCAF11-211ENST00000547950 CCT8L2Q96SF2 557 aa5.6□□□□□ -1.51
SCAF11-211ENST00000547950 NUDT16L1Q9BRJ7 211 aaKnown RBP5.6□□□□□ -1.51
SCAF11-211ENST00000547950 COPS4Q9BT78 406 aa5.6□□□□□ -1.51
SCAF11-211ENST00000547950 RASSF4Q9H2L5 321 aa5.6□□□□□ -1.51
SCAF11-211ENST00000547950 MMADHCQ9H3L0 296 aaPredicted RBP5.6□□□□□ -1.51
SCAF11-211ENST00000547950 REEP1Q9H902 201 aa5.6□□□□□ -1.51
SCAF11-211ENST00000547950 FN3KRPQ9HA64 309 aa5.6□□□□□ -1.51
SCAF11-211ENST00000547950 ARMC1Q9NVT9 282 aa5.6□□□□□ -1.51
SCAF11-211ENST00000547950 VNN3Q9NY84 501 aa5.6□□□□□ -1.51
SCAF11-211ENST00000547950 CLN8Q9UBY8 286 aa5.6□□□□□ -1.51
SCAF11-211ENST00000547950 KCNG2Q9UJ96 466 aa5.6□□□□□ -1.51
SCAF11-211ENST00000547950 LRCH1Q9Y2L9 728 aa5.6□□□□□ -1.51
SCAF11-211ENST00000547950 SAMHD1Q9Y3Z3 626 aaKnown RBP5.6□□□□□ -1.51
SCAF11-211ENST00000547950 IGHV2-70DA0A0C4DH43 119 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 KIR2DS1A0A191URI9 304 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 A0A1B0GWJ7 208 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 DNAJC9-AS1A6NH13 148 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 A6NLC8 198 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 RIIAD1A6NNX1 92 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 A8MXK9 166 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 H3BN98 237 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 TBX1O43435 398 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 GMDSO60547 372 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 IFNGP01579 166 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 SPI1P17947 270 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 EGR1P18146 543 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 ANOS1P23352 680 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 CPT2P23786 658 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 PRTN3P24158 256 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 POU1F1P28069 291 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 MTNR1AP48039 350 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 ENTPD1P49961 510 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 SLC25A1P53007 311 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 PAX2Q02962 417 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 EIF2B1Q14232 305 aaKnown RBP5.59□□□□□ -1.51
SCAF11-211ENST00000547950 TRIM25Q14258 630 aaKnown RBP5.59□□□□□ -1.51
SCAF11-211ENST00000547950 OR8B8Q15620 311 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 AWAT1Q58HT5 328 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 WDR25Q64LD2 544 aaPredicted RBP5.59□□□□□ -1.51
SCAF11-211ENST00000547950 OR2T5Q6IEZ7 315 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 ZNF826PQ6ZT77 177 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 DOK3Q7L591 496 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 PARP8Q8N3A8 854 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 CELF2-AS1Q8N7Q2 184 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 OR2T33Q8NG76 320 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 OR2T29Q8NH02 315 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 Q8TCH9 128 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 TAF15Q92804 592 aaKnown RBP eCLIP5.59□□□□□ -1.51
SCAF11-211ENST00000547950 ERGIC1Q969X5 290 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 CLPTM1LQ96KA5 538 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 LRGUKQ96M69 825 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 ZNF48Q96MX3 618 aaPredicted RBP5.59□□□□□ -1.51
SCAF11-211ENST00000547950 TECTBQ96PL2 329 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 FEVQ99581 238 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 KCNJ15Q99712 375 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 ADAT1Q9BUB4 502 aaKnown RBP5.59□□□□□ -1.51
SCAF11-211ENST00000547950 CHID1Q9BWS9 393 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 SLC22A4Q9H015 551 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 MAGIXQ9H6Y5 334 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 MED20Q9H944 212 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 TNFRSF19Q9NS68 423 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 C1orf123Q9NWV4 160 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 ERVK-18Q9QC07 812 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 RNF7Q9UBF6 113 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 BAIAP2Q9UQB8 552 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 NOP16Q9Y3C1 178 aaKnown RBP5.59□□□□□ -1.51
SCAF11-211ENST00000547950 PCDHGB1Q9Y5G3 927 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 COMMD3-BMI1R4GMX3 469 aa5.59□□□□□ -1.51
SCAF11-211ENST00000547950 IGHV3OR15-7A0A075B7D8 119 aa5.58□□□□□ -1.52
SCAF11-211ENST00000547950 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.58□□□□□ -1.52
SCAF11-211ENST00000547950 MDFIC2A0A1B0GVS7 189 aa5.58□□□□□ -1.52
SCAF11-211ENST00000547950 hCG_1807616A0A1W2PRN6 198 aa5.58□□□□□ -1.52
SCAF11-211ENST00000547950 DHRS12A0PJE2 317 aa5.58□□□□□ -1.52
SCAF11-211ENST00000547950 FAM183AA6NL82 134 aa5.58□□□□□ -1.52
SCAF11-211ENST00000547950 ANKRD30BLA7E2S9 258 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms