RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 SLC22A4Q9H015 551 aa10.96□□□□□ -0.65
TNFRSF1A-215ENST00000543359 MRPL15Q9P015 296 aaKnown RBP10.96□□□□□ -0.65
TNFRSF1A-215ENST00000543359 DNAJB9Q9UBS3 223 aa10.96□□□□□ -0.65
TNFRSF1A-215ENST00000543359 LRRC30A6NM36 301 aa10.95□□□□□ -0.66
TNFRSF1A-215ENST00000543359 GMDSO60547 372 aa10.95□□□□□ -0.66
TNFRSF1A-215ENST00000543359 FAM20BO75063 409 aa10.95□□□□□ -0.66
TNFRSF1A-215ENST00000543359 RGS9O75916 674 aaPredicted RBP10.95□□□□□ -0.66
TNFRSF1A-215ENST00000543359 DNAJC8O75937 253 aaPredicted RBP10.95□□□□□ -0.66
TNFRSF1A-215ENST00000543359 POU1F1P28069 291 aa10.95□□□□□ -0.66
TNFRSF1A-215ENST00000543359 GRB2P62993 217 aaKnown RBP10.95□□□□□ -0.66
TNFRSF1A-215ENST00000543359 CBX1P83916 185 aa10.95□□□□□ -0.66
TNFRSF1A-215ENST00000543359 FAM3AP98173 230 aa10.95□□□□□ -0.66
TNFRSF1A-215ENST00000543359 BNIP1Q12981 228 aa10.95□□□□□ -0.66
TNFRSF1A-215ENST00000543359 SCGB2A2Q13296 93 aa10.95□□□□□ -0.66
TNFRSF1A-215ENST00000543359 EIF2B1Q14232 305 aaKnown RBP10.95□□□□□ -0.66
TNFRSF1A-215ENST00000543359 KLHL12Q53G59 568 aa10.95□□□□□ -0.66
TNFRSF1A-215ENST00000543359 PLBD1Q6P4A8 553 aa10.95□□□□□ -0.66
TNFRSF1A-215ENST00000543359 ZNF841Q6ZN19 808 aa10.95□□□□□ -0.66
TNFRSF1A-215ENST00000543359 RHOUQ7L0Q8 258 aa10.95□□□□□ -0.66
TNFRSF1A-215ENST00000543359 ERI1Q8IV48 349 aaKnown RBP10.95□□□□□ -0.66
TNFRSF1A-215ENST00000543359 PLPP7Q8NBV4 271 aa10.95□□□□□ -0.66
TNFRSF1A-215ENST00000543359 OR56B2PQ8NGI1 322 aa10.95□□□□□ -0.66
TNFRSF1A-215ENST00000543359 ZMYND19Q96E35 227 aaPredicted RBP10.95□□□□□ -0.66
TNFRSF1A-215ENST00000543359 SLC6A7Q99884 636 aa10.95□□□□□ -0.66
TNFRSF1A-215ENST00000543359 OR51V1Q9H2C8 321 aa10.95□□□□□ -0.66
TNFRSF1A-215ENST00000543359 TOR3AQ9H497 397 aa10.95□□□□□ -0.66
TNFRSF1A-215ENST00000543359 ESM1Q9NQ30 184 aa10.95□□□□□ -0.66
TNFRSF1A-215ENST00000543359 MIOXQ9UGB7 285 aa10.95□□□□□ -0.66
TNFRSF1A-215ENST00000543359 LRCH1Q9Y2L9 728 aa10.95□□□□□ -0.66
TNFRSF1A-215ENST00000543359 PPIAL4AQ9Y536 164 aa10.95□□□□□ -0.66
TNFRSF1A-215ENST00000543359 MGAM2Q2M2H8 2515 aa10.94□□□□□ -0.66
TNFRSF1A-215ENST00000543359 GGT3PA6NGU5 568 aa10.94□□□□□ -0.66
TNFRSF1A-215ENST00000543359 GNGT2O14610 69 aa10.94□□□□□ -0.66
TNFRSF1A-215ENST00000543359 SELENOFO60613 162 aa10.94□□□□□ -0.66
TNFRSF1A-215ENST00000543359 HMGN1P05114 100 aa10.94□□□□□ -0.66
TNFRSF1A-215ENST00000543359 ANXA8P13928 327 aa10.94□□□□□ -0.66
TNFRSF1A-215ENST00000543359 SLC2A5P22732 501 aa10.94□□□□□ -0.66
TNFRSF1A-215ENST00000543359 PSMB10P40306 273 aa10.94□□□□□ -0.66
TNFRSF1A-215ENST00000543359 SLC15A1P46059 708 aa10.94□□□□□ -0.66
TNFRSF1A-215ENST00000543359 CX3CR1P49238 355 aa10.94□□□□□ -0.66
TNFRSF1A-215ENST00000543359 TAF13Q15543 124 aa10.94□□□□□ -0.66
TNFRSF1A-215ENST00000543359 OR8G1Q15617 311 aa10.94□□□□□ -0.66
TNFRSF1A-215ENST00000543359 ESCO2Q56NI9 601 aa10.94□□□□□ -0.66
TNFRSF1A-215ENST00000543359 TMEM236Q5W0B7 351 aa10.94□□□□□ -0.66
TNFRSF1A-215ENST00000543359 FAHD1Q6P587 224 aa10.94□□□□□ -0.66
TNFRSF1A-215ENST00000543359 LYPD2Q6UXB3 125 aa10.94□□□□□ -0.66
TNFRSF1A-215ENST00000543359 SLC16A9Q7RTY1 509 aa10.94□□□□□ -0.66
TNFRSF1A-215ENST00000543359 CPOQ8IVL8 374 aa10.94□□□□□ -0.66
TNFRSF1A-215ENST00000543359 C11orf53Q8IXP5 236 aa10.94□□□□□ -0.66
TNFRSF1A-215ENST00000543359 C1orf87Q8N0U7 546 aa10.94□□□□□ -0.66
TNFRSF1A-215ENST00000543359 C19orf18Q8NEA5 215 aa10.94□□□□□ -0.66
TNFRSF1A-215ENST00000543359 BBS1Q8NFJ9 593 aa10.94□□□□□ -0.66
TNFRSF1A-215ENST00000543359 OTOSQ8NHW6 89 aa10.94□□□□□ -0.66
TNFRSF1A-215ENST00000543359 ZNF418Q8TF45 676 aaPredicted RBP10.94□□□□□ -0.66
TNFRSF1A-215ENST00000543359 NRBF2Q96F24 287 aa10.94□□□□□ -0.66
TNFRSF1A-215ENST00000543359 SLC25A19Q9HC21 320 aa10.94□□□□□ -0.66
TNFRSF1A-215ENST00000543359 UFSP2Q9NUQ7 469 aa10.94□□□□□ -0.66
TNFRSF1A-215ENST00000543359 KLHDC2Q9Y2U9 406 aa10.94□□□□□ -0.66
TNFRSF1A-215ENST00000543359 N6AMT1Q9Y5N5 214 aa10.94□□□□□ -0.66
TNFRSF1A-215ENST00000543359 KIR2DS1A0A191URI9 304 aa10.93□□□□□ -0.66
TNFRSF1A-215ENST00000543359 PRR23D1E9PI22 279 aaPredicted RBP10.93□□□□□ -0.66
TNFRSF1A-215ENST00000543359 PRODHO43272 600 aa10.93□□□□□ -0.66
TNFRSF1A-215ENST00000543359 XRCC2O43543 280 aa10.93□□□□□ -0.66
TNFRSF1A-215ENST00000543359 E2F6O75461 281 aa10.93□□□□□ -0.66
TNFRSF1A-215ENST00000543359 FCN3O75636 299 aa10.93□□□□□ -0.66
TNFRSF1A-215ENST00000543359 LHBP01229 141 aa10.93□□□□□ -0.66
TNFRSF1A-215ENST00000543359 PRR23D2P0DMB1 279 aaPredicted RBP10.93□□□□□ -0.66
TNFRSF1A-215ENST00000543359 RPS2P15880 293 aaKnown RBP10.93□□□□□ -0.66
TNFRSF1A-215ENST00000543359 DAPP51397 102 aa10.93□□□□□ -0.66
TNFRSF1A-215ENST00000543359 ZNF121P58317 390 aaPredicted RBP10.93□□□□□ -0.66
TNFRSF1A-215ENST00000543359 SHFQ7M4L6 423 aa10.93□□□□□ -0.66
TNFRSF1A-215ENST00000543359 WDR86Q86TI4 376 aa10.93□□□□□ -0.66
TNFRSF1A-215ENST00000543359 ZDHHC22Q8N966 263 aa10.93□□□□□ -0.66
TNFRSF1A-215ENST00000543359 SPERTQ8NA61 448 aa10.93□□□□□ -0.66
TNFRSF1A-215ENST00000543359 OR6N2Q8NGY6 317 aa10.93□□□□□ -0.66
TNFRSF1A-215ENST00000543359 FAM216AQ8WUB2 273 aa10.93□□□□□ -0.66
TNFRSF1A-215ENST00000543359 C22orf15Q8WYQ4 148 aa10.93□□□□□ -0.66
TNFRSF1A-215ENST00000543359 NEIL1Q96FI4 390 aaPredicted RBP10.93□□□□□ -0.66
TNFRSF1A-215ENST00000543359 ADAT1Q9BUB4 502 aaKnown RBP10.93□□□□□ -0.66
TNFRSF1A-215ENST00000543359 SSBP3Q9BWW4 388 aaPredicted RBP10.93□□□□□ -0.66
TNFRSF1A-215ENST00000543359 OPA3Q9H6K4 179 aa10.93□□□□□ -0.66
TNFRSF1A-215ENST00000543359 PPP1R3EQ9H7J1 279 aa10.93□□□□□ -0.66
TNFRSF1A-215ENST00000543359 YY1AP1Q9H869 796 aa10.93□□□□□ -0.66
TNFRSF1A-215ENST00000543359 RNF7Q9UBF6 113 aa10.93□□□□□ -0.66
TNFRSF1A-215ENST00000543359 AUP1Q9Y679 476 aa10.93□□□□□ -0.66
TNFRSF1A-215ENST00000543359 IGHV2-70DA0A0C4DH43 119 aa10.92□□□□□ -0.66
TNFRSF1A-215ENST00000543359 hCG_38984A0A1B0GV85 526 aa10.92□□□□□ -0.66
TNFRSF1A-215ENST00000543359 TIPRLO75663 272 aa10.92□□□□□ -0.66
TNFRSF1A-215ENST00000543359 ANXA2P07355 339 aaKnown RBP10.92□□□□□ -0.66
TNFRSF1A-215ENST00000543359 PPIAL4GP0DN37 164 aa10.92□□□□□ -0.66
TNFRSF1A-215ENST00000543359 PAICSP22234 425 aaKnown RBP10.92□□□□□ -0.66
TNFRSF1A-215ENST00000543359 DDOSTP39656 456 aa10.92□□□□□ -0.66
TNFRSF1A-215ENST00000543359 EFNB1P98172 346 aa10.92□□□□□ -0.66
TNFRSF1A-215ENST00000543359 WDR25Q64LD2 544 aaPredicted RBP10.92□□□□□ -0.66
TNFRSF1A-215ENST00000543359 DCDC5Q6ZRR9 648 aa10.92□□□□□ -0.66
TNFRSF1A-215ENST00000543359 ZNF826PQ6ZT77 177 aa10.92□□□□□ -0.66
TNFRSF1A-215ENST00000543359 FAM57BQ71RH2 274 aa10.92□□□□□ -0.66
TNFRSF1A-215ENST00000543359 BCL6BQ8N143 479 aaPredicted RBP10.92□□□□□ -0.66
TNFRSF1A-215ENST00000543359 GCSAMQ8N6F7 178 aa10.92□□□□□ -0.66
TNFRSF1A-215ENST00000543359 ZNF454Q8N9F8 522 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms