RNA–Protein interactions for RNA: ENST00000542420.6

SS18-205, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2 BASIC

Gene SS18, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-205ENST00000542420 OR4D6Q8NGJ1 314 aa8.71□□□□□ -1.01
SS18-205ENST00000542420 OR2T35Q8NGX2 323 aa8.71□□□□□ -1.01
SS18-205ENST00000542420 ST8SIA2Q92186 375 aa8.71□□□□□ -1.01
SS18-205ENST00000542420 ADAT3Q96EY9 351 aaPredicted RBP8.71□□□□□ -1.01
SS18-205ENST00000542420 CPNE2Q96FN4 548 aaPredicted RBP8.71□□□□□ -1.01
SS18-205ENST00000542420 SFXN2Q96NB2 322 aa8.71□□□□□ -1.01
SS18-205ENST00000542420 SEC61A2Q9H9S3 476 aa8.71□□□□□ -1.01
SS18-205ENST00000542420 ZNF69Q9UC07 566 aa8.71□□□□□ -1.01
SS18-205ENST00000542420 TCFL5Q9UL49 500 aa8.71□□□□□ -1.01
SS18-205ENST00000542420 TRIOBPQ9H2D6 2365 aa8.71□□□□□ -1.01
SS18-205ENST00000542420 PLSCR5A0PG75 271 aa8.71□□□□□ -1.02
SS18-205ENST00000542420 DCDC2BA2VCK2 349 aa8.71□□□□□ -1.02
SS18-205ENST00000542420 ZNF814B7Z6K7 855 aa8.71□□□□□ -1.02
SS18-205ENST00000542420 CD3DP04234 171 aa8.71□□□□□ -1.02
SS18-205ENST00000542420 ZNF735P0CB33 412 aa8.71□□□□□ -1.02
SS18-205ENST00000542420 SFTPDP35247 375 aa8.71□□□□□ -1.02
SS18-205ENST00000542420 ZNF93P35789 620 aaPredicted RBP8.71□□□□□ -1.02
SS18-205ENST00000542420 ZNF121P58317 390 aaPredicted RBP8.71□□□□□ -1.02
SS18-205ENST00000542420 B3GALT5-AS1P59052 145 aa8.71□□□□□ -1.02
SS18-205ENST00000542420 FOXK1P85037 733 aa8.71□□□□□ -1.02
SS18-205ENST00000542420 LGALSLQ3ZCW2 172 aaPredicted RBP8.71□□□□□ -1.02
SS18-205ENST00000542420 RIPPLY2Q5TAB7 128 aa8.71□□□□□ -1.02
SS18-205ENST00000542420 FAM27BQ5VT28 67 aa8.71□□□□□ -1.02
SS18-205ENST00000542420 PRAMEF20Q5VT98 475 aa8.71□□□□□ -1.02
SS18-205ENST00000542420 RAET1LQ5VY80 246 aa8.71□□□□□ -1.02
SS18-205ENST00000542420 NSUN5P2Q63ZY6 315 aa8.71□□□□□ -1.02
SS18-205ENST00000542420 ZNF627Q7L945 461 aa8.71□□□□□ -1.02
SS18-205ENST00000542420 OR8H3Q8N146 312 aa8.71□□□□□ -1.02
SS18-205ENST00000542420 PAQR4Q8N4S7 273 aaPredicted RBP8.71□□□□□ -1.02
SS18-205ENST00000542420 OR2AK2Q8NG84 335 aa8.71□□□□□ -1.02
SS18-205ENST00000542420 OR11H4Q8NGC9 324 aa8.71□□□□□ -1.02
SS18-205ENST00000542420 OR14K1Q8NGZ2 314 aa8.71□□□□□ -1.02
SS18-205ENST00000542420 NABP1Q96AH0 204 aa8.71□□□□□ -1.02
SS18-205ENST00000542420 SEC22CQ9BRL7 303 aa8.71□□□□□ -1.02
SS18-205ENST00000542420 SPRY4Q9C004 299 aa8.71□□□□□ -1.02
SS18-205ENST00000542420 ZNF160Q9HCG1 818 aa8.71□□□□□ -1.02
SS18-205ENST00000542420 ASH2LQ9UBL3 628 aa8.71□□□□□ -1.02
SS18-205ENST00000542420 PRELID3BQ9Y3B1 194 aa8.71□□□□□ -1.02
SS18-205ENST00000542420 KCNMB2Q9Y691 235 aa8.71□□□□□ -1.02
SS18-205ENST00000542420 NCOA6Q14686 2063 aaPredicted RBP8.7□□□□□ -1.02
SS18-205ENST00000542420 STK17BO94768 372 aa8.7□□□□□ -1.02
SS18-205ENST00000542420 CST2P09228 141 aa8.7□□□□□ -1.02
SS18-205ENST00000542420 VSIG10L2P0DP72 767 aa8.7□□□□□ -1.02
SS18-205ENST00000542420 VSIG8P0DPA2 414 aa8.7□□□□□ -1.02
SS18-205ENST00000542420 ANXA7P20073 488 aaKnown RBP8.7□□□□□ -1.02
SS18-205ENST00000542420 SELENOPP49908 381 aa8.7□□□□□ -1.02
SS18-205ENST00000542420 ENDOGQ14249 297 aaKnown RBP8.7□□□□□ -1.02
SS18-205ENST00000542420 CSRP2Q16527 193 aa8.7□□□□□ -1.02
SS18-205ENST00000542420 ABLIM2Q6H8Q1 611 aa8.7□□□□□ -1.02
SS18-205ENST00000542420 OR5AS1Q8N127 324 aa8.7□□□□□ -1.02
SS18-205ENST00000542420 ZNF283Q8N7M2 679 aa8.7□□□□□ -1.02
SS18-205ENST00000542420 BEST4Q8NFU0 473 aa8.7□□□□□ -1.02
SS18-205ENST00000542420 OR52N4Q8NGI2 321 aa8.7□□□□□ -1.02
SS18-205ENST00000542420 OR51S1Q8NGJ8 323 aa8.7□□□□□ -1.02
SS18-205ENST00000542420 OR10R2Q8NGX6 335 aa8.7□□□□□ -1.02
SS18-205ENST00000542420 URM1Q9BTM9 101 aaKnown RBP8.7□□□□□ -1.02
SS18-205ENST00000542420 EXO5Q9H790 373 aa8.7□□□□□ -1.02
SS18-205ENST00000542420 ZC4H2Q9NQZ6 224 aa8.7□□□□□ -1.02
SS18-205ENST00000542420 LOXL2Q9Y4K0 774 aa8.7□□□□□ -1.02
SS18-205ENST00000542420 TMEM82A0PJX8 343 aa8.7□□□□□ -1.02
SS18-205ENST00000542420 PATE3B3GLJ2 98 aa8.7□□□□□ -1.02
SS18-205ENST00000542420 C21orf140B9A014 251 aa8.7□□□□□ -1.02
SS18-205ENST00000542420 EIF1AYO14602 144 aaKnown RBP8.7□□□□□ -1.02
SS18-205ENST00000542420 RAD1O60671 282 aa8.7□□□□□ -1.02
SS18-205ENST00000542420 PDGFBP01127 241 aaPredicted RBP8.7□□□□□ -1.02
SS18-205ENST00000542420 ZP3P21754 424 aa8.7□□□□□ -1.02
SS18-205ENST00000542420 GMFBP60983 142 aa8.7□□□□□ -1.02
SS18-205ENST00000542420 GUCA2AQ02747 115 aa8.7□□□□□ -1.02
SS18-205ENST00000542420 FGL1Q08830 312 aa8.7□□□□□ -1.02
SS18-205ENST00000542420 UNC119Q13432 240 aa8.7□□□□□ -1.02
SS18-205ENST00000542420 INPP5JQ15735 1006 aaPredicted RBP8.7□□□□□ -1.02
SS18-205ENST00000542420 PDSS1Q5T2R2 415 aa8.7□□□□□ -1.02
SS18-205ENST00000542420 Q7L0L9 218 aa8.7□□□□□ -1.02
SS18-205ENST00000542420 GPR137CQ8N3F9 429 aa8.7□□□□□ -1.02
SS18-205ENST00000542420 PNLDC1Q8NA58 520 aaKnown RBP8.7□□□□□ -1.02
SS18-205ENST00000542420 OR56B1Q8NGI3 324 aa8.7□□□□□ -1.02
SS18-205ENST00000542420 OR51E1Q8TCB6 317 aa8.7□□□□□ -1.02
SS18-205ENST00000542420 CPT1CQ8TCG5 803 aa8.7□□□□□ -1.02
SS18-205ENST00000542420 RBPMSQ93062 196 aaKnown RBP8.7□□□□□ -1.02
SS18-205ENST00000542420 SPTSSAQ969W0 71 aa8.7□□□□□ -1.02
SS18-205ENST00000542420 TMEM45BQ96B21 275 aa8.7□□□□□ -1.02
SS18-205ENST00000542420 MS4A3Q96HJ5 214 aa8.7□□□□□ -1.02
SS18-205ENST00000542420 GPR87Q9BY21 358 aa8.7□□□□□ -1.02
SS18-205ENST00000542420 REG4Q9BYZ8 158 aa8.7□□□□□ -1.02
SS18-205ENST00000542420 GPR84Q9NQS5 396 aa8.7□□□□□ -1.02
SS18-205ENST00000542420 FARSAQ9Y285 508 aaKnown RBP8.7□□□□□ -1.02
SS18-205ENST00000542420 PCDHGA1Q9Y5H4 931 aa8.7□□□□□ -1.02
SS18-205ENST00000542420 SZT2Q5T011 3432 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 CEACAM18A8MTB9 384 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 F5H5P2 479 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 M0R233 179 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 DHRS3O75911 302 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 PTHLHP12272 177 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 TAS2R31P59538 309 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 MFAP5Q13361 173 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 RAB35Q15286 201 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 KRTAP27-1Q3LI81 207 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 FAM209BQ5JX69 171 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 VAX1Q5SQQ9 334 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 B3GNTL1Q67FW5 361 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms