RNA–Protein interactions for RNA: ENST00000540987.1

POLE-215, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 3

Gene POLE, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-215	ENST00000540987	PCDHB10	Q9UN67	800 aa		11.43	□□□□□ -0.58
POLE-215	ENST00000540987	ANK2	Q01484	3957 aa		11.42	□□□□□ -0.58
POLE-215	ENST00000540987	hCG_38984	A0A1B0GV85	526 aa		11.42	□□□□□ -0.58
POLE-215	ENST00000540987	TRAPPC2L	H3BP13	241 aa		11.42	□□□□□ -0.58
POLE-215	ENST00000540987	XRCC2	O43543	280 aa		11.42	□□□□□ -0.58
POLE-215	ENST00000540987	TCF21	O43680	179 aa		11.42	□□□□□ -0.58
POLE-215	ENST00000540987	FOXH1	O75593	365 aa		11.42	□□□□□ -0.58
POLE-215	ENST00000540987	PTBP3	O95758	552 aa	Known RBP	11.42	□□□□□ -0.58
POLE-215	ENST00000540987	HMGN1	P05114	100 aa		11.42	□□□□□ -0.58
POLE-215	ENST00000540987	ANXA2	P07355	339 aa	Known RBP	11.42	□□□□□ -0.58
POLE-215	ENST00000540987	EPHA1	P21709	976 aa		11.42	□□□□□ -0.58
POLE-215	ENST00000540987	HSD11B1	P28845	292 aa		11.42	□□□□□ -0.58
POLE-215	ENST00000540987	CRISP1	P54107	249 aa		11.42	□□□□□ -0.58
POLE-215	ENST00000540987	ZNF121	P58317	390 aa	Predicted RBP	11.42	□□□□□ -0.58
POLE-215	ENST00000540987	ZNF404	Q494X3	552 aa		11.42	□□□□□ -0.58
POLE-215	ENST00000540987	FAM57B	Q71RH2	274 aa		11.42	□□□□□ -0.58
POLE-215	ENST00000540987	PARP8	Q8N3A8	854 aa		11.42	□□□□□ -0.58
POLE-215	ENST00000540987	KLHL36	Q8N4N3	616 aa		11.42	□□□□□ -0.58
POLE-215	ENST00000540987	C19orf18	Q8NEA5	215 aa		11.42	□□□□□ -0.58
POLE-215	ENST00000540987	SEMA6D	Q8NFY4	1073 aa		11.42	□□□□□ -0.58
POLE-215	ENST00000540987	OTOS	Q8NHW6	89 aa		11.42	□□□□□ -0.58
POLE-215	ENST00000540987	DNAJC9	Q8WXX5	260 aa		11.42	□□□□□ -0.58
POLE-215	ENST00000540987	TMEM246	Q9BRR3	403 aa		11.42	□□□□□ -0.58
POLE-215	ENST00000540987	TOR3A	Q9H497	397 aa		11.42	□□□□□ -0.58
POLE-215	ENST00000540987	OPA3	Q9H6K4	179 aa		11.42	□□□□□ -0.58
POLE-215	ENST00000540987	TMEM165	Q9HC07	324 aa		11.42	□□□□□ -0.58
POLE-215	ENST00000540987	UFSP2	Q9NUQ7	469 aa		11.42	□□□□□ -0.58
POLE-215	ENST00000540987	MRPL15	Q9P015	296 aa	Known RBP	11.42	□□□□□ -0.58
POLE-215	ENST00000540987	METRN	Q9UJH8	293 aa		11.42	□□□□□ -0.58
POLE-215	ENST00000540987	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	11.42	□□□□□ -0.58
POLE-215	ENST00000540987	PPIAL4E	A0A075B759	164 aa		11.41	□□□□□ -0.58
POLE-215	ENST00000540987	PPIAL4C	A0A0B4J2A2	164 aa		11.41	□□□□□ -0.58
POLE-215	ENST00000540987	PRR32	B1ATL7	298 aa		11.41	□□□□□ -0.58
POLE-215	ENST00000540987	PPIAL4D	F5H284	164 aa		11.41	□□□□□ -0.58
POLE-215	ENST00000540987	PRKY	O43930	277 aa		11.41	□□□□□ -0.58
POLE-215	ENST00000540987	RGS9	O75916	674 aa	Predicted RBP	11.41	□□□□□ -0.58
POLE-215	ENST00000540987	VENTX	O95231	258 aa		11.41	□□□□□ -0.58
POLE-215	ENST00000540987	LYN	P07948	512 aa		11.41	□□□□□ -0.58
POLE-215	ENST00000540987	WNT2	P09544	360 aa		11.41	□□□□□ -0.58
POLE-215	ENST00000540987	PPIAL4F	P0DN26	164 aa		11.41	□□□□□ -0.58
POLE-215	ENST00000540987	RPS2	P15880	293 aa	Known RBP	11.41	□□□□□ -0.58
POLE-215	ENST00000540987	ZNF12	P17014	697 aa		11.41	□□□□□ -0.58
POLE-215	ENST00000540987	EPHA2	P29317	976 aa		11.41	□□□□□ -0.58
POLE-215	ENST00000540987	SLC15A1	P46059	708 aa		11.41	□□□□□ -0.58
POLE-215	ENST00000540987	FAM3A	P98173	230 aa		11.41	□□□□□ -0.58
POLE-215	ENST00000540987	APOF	Q13790	326 aa		11.41	□□□□□ -0.58
POLE-215	ENST00000540987	SLC35D3	Q5M8T2	416 aa		11.41	□□□□□ -0.58
POLE-215	ENST00000540987	C1orf146	Q5VVC0	180 aa		11.41	□□□□□ -0.58
POLE-215	ENST00000540987	SLC16A9	Q7RTY1	509 aa		11.41	□□□□□ -0.58
POLE-215	ENST00000540987	WDR86	Q86TI4	376 aa		11.41	□□□□□ -0.58
POLE-215	ENST00000540987	KLB	Q86Z14	1044 aa		11.41	□□□□□ -0.58
POLE-215	ENST00000540987	SGK3	Q96BR1	496 aa		11.41	□□□□□ -0.58
POLE-215	ENST00000540987	DUS3L	Q96G46	650 aa	Known RBP	11.41	□□□□□ -0.58
POLE-215	ENST00000540987	REEP6	Q96HR9	211 aa		11.41	□□□□□ -0.58
POLE-215	ENST00000540987	PLEKHA8	Q96JA3	519 aa		11.41	□□□□□ -0.58
POLE-215	ENST00000540987	SLC22A4	Q9H015	551 aa		11.41	□□□□□ -0.58
POLE-215	ENST00000540987	GABARAPL1	Q9H0R8	117 aa		11.41	□□□□□ -0.58
POLE-215	ENST00000540987	PPP1R3E	Q9H7J1	279 aa		11.41	□□□□□ -0.58
POLE-215	ENST00000540987	BRD7	Q9NPI1	651 aa		11.41	□□□□□ -0.58
POLE-215	ENST00000540987	TVP23B	Q9NYZ1	205 aa		11.41	□□□□□ -0.58
POLE-215	ENST00000540987	LRCH1	Q9Y2L9	728 aa		11.41	□□□□□ -0.58
POLE-215	ENST00000540987	LRRC30	A6NM36	301 aa		11.4	□□□□□ -0.58
POLE-215	ENST00000540987	GMDS	O60547	372 aa		11.4	□□□□□ -0.58
POLE-215	ENST00000540987	FSTL3	O95633	263 aa		11.4	□□□□□ -0.58
POLE-215	ENST00000540987	MRPL3	P09001	348 aa	Known RBP	11.4	□□□□□ -0.58
POLE-215	ENST00000540987	H2BFM	P0C1H6	154 aa		11.4	□□□□□ -0.58
POLE-215	ENST00000540987	GATA3	P23771	443 aa		11.4	□□□□□ -0.58
POLE-215	ENST00000540987	CD80	P33681	288 aa		11.4	□□□□□ -0.58
POLE-215	ENST00000540987	PSMA6	P60900	246 aa	Known RBP	11.4	□□□□□ -0.58
POLE-215	ENST00000540987	RPS7	P62081	194 aa	Known RBP	11.4	□□□□□ -0.58
POLE-215	ENST00000540987	PAX2	Q02962	417 aa		11.4	□□□□□ -0.58
POLE-215	ENST00000540987	PTGES3	Q15185	160 aa	Known RBP	11.4	□□□□□ -0.58
POLE-215	ENST00000540987	SNAPC1	Q16533	368 aa		11.4	□□□□□ -0.58
POLE-215	ENST00000540987	TIGD6	Q17RP2	521 aa		11.4	□□□□□ -0.58
POLE-215	ENST00000540987	GFOD2	Q3B7J2	385 aa		11.4	□□□□□ -0.58
POLE-215	ENST00000540987	ESCO2	Q56NI9	601 aa		11.4	□□□□□ -0.58
POLE-215	ENST00000540987	LYPD2	Q6UXB3	125 aa		11.4	□□□□□ -0.58
POLE-215	ENST00000540987	LRRN1	Q6UXK5	716 aa		11.4	□□□□□ -0.58
POLE-215	ENST00000540987	BCDIN3D	Q7Z5W3	292 aa	Known RBP	11.4	□□□□□ -0.58
POLE-215	ENST00000540987	AMIGO2	Q86SJ2	522 aa		11.4	□□□□□ -0.58
POLE-215	ENST00000540987	C1orf87	Q8N0U7	546 aa		11.4	□□□□□ -0.58
POLE-215	ENST00000540987	ZNF454	Q8N9F8	522 aa		11.4	□□□□□ -0.58
POLE-215	ENST00000540987	OR11L1	Q8NGX0	322 aa		11.4	□□□□□ -0.58
POLE-215	ENST00000540987	THEM6	Q8WUY1	208 aa		11.4	□□□□□ -0.58
POLE-215	ENST00000540987	ERGIC1	Q969X5	290 aa		11.4	□□□□□ -0.58
POLE-215	ENST00000540987	DACT3	Q96B18	629 aa	Predicted RBP	11.4	□□□□□ -0.58
POLE-215	ENST00000540987	OCEL1	Q9H607	264 aa		11.4	□□□□□ -0.58
POLE-215	ENST00000540987	C7orf69	Q9H7B7	122 aa		11.4	□□□□□ -0.58
POLE-215	ENST00000540987	NOP16	Q9Y3C1	178 aa	Known RBP	11.4	□□□□□ -0.58
POLE-215	ENST00000540987	PPIAL4A	Q9Y536	164 aa		11.4	□□□□□ -0.58
POLE-215	ENST00000540987	INSIG2	Q9Y5U4	225 aa		11.4	□□□□□ -0.58
POLE-215	ENST00000540987	ATP5H	O75947	161 aa		11.39	□□□□□ -0.59
POLE-215	ENST00000540987	EGR1	P18146	543 aa		11.39	□□□□□ -0.59
POLE-215	ENST00000540987	ALOX5AP	P20292	161 aa		11.39	□□□□□ -0.59
POLE-215	ENST00000540987	GSK3A	P49840	483 aa		11.39	□□□□□ -0.59
POLE-215	ENST00000540987	RASSF2	P50749	326 aa		11.39	□□□□□ -0.59
POLE-215	ENST00000540987	HCCS	P53701	268 aa		11.39	□□□□□ -0.59
POLE-215	ENST00000540987	ESRRG	P62508	458 aa		11.39	□□□□□ -0.59
POLE-215	ENST00000540987	ZNF154	Q13106	437 aa		11.39	□□□□□ -0.59
POLE-215	ENST00000540987	SLX4IP	Q5VYV7	408 aa		11.39	□□□□□ -0.59

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