RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 IQCF6A8MYZ5 107 aa13.22□□□□□ -0.29
DDB1-218ENST00000540784 SSX4O60224 188 aa13.22□□□□□ -0.29
DDB1-218ENST00000540784 SRSF10O75494 262 aaKnown RBP13.22□□□□□ -0.29
DDB1-218ENST00000540784 MYL12AP19105 171 aa13.22□□□□□ -0.29
DDB1-218ENST00000540784 DDOSTP39656 456 aa13.22□□□□□ -0.29
DDB1-218ENST00000540784 PRSS12P56730 875 aa13.22□□□□□ -0.29
DDB1-218ENST00000540784 FAM3AP98173 230 aa13.22□□□□□ -0.29
DDB1-218ENST00000540784 MFGE8Q08431 387 aaPredicted RBP13.22□□□□□ -0.29
DDB1-218ENST00000540784 TSTQ16762 297 aaKnown RBP13.22□□□□□ -0.29
DDB1-218ENST00000540784 PCGF3Q3KNV8 242 aa13.22□□□□□ -0.29
DDB1-218ENST00000540784 BCL2L15Q5TBC7 163 aa13.22□□□□□ -0.29
DDB1-218ENST00000540784 SHEQ5VZ18 495 aa13.22□□□□□ -0.29
DDB1-218ENST00000540784 STX19Q8N4C7 294 aa13.22□□□□□ -0.29
DDB1-218ENST00000540784 ZNF540Q8NDQ6 660 aa13.22□□□□□ -0.29
DDB1-218ENST00000540784 OR13G1Q8NGZ3 307 aa13.22□□□□□ -0.29
DDB1-218ENST00000540784 GTF3AQ92664 365 aaKnown RBP13.22□□□□□ -0.29
DDB1-218ENST00000540784 RORBQ92753 470 aa13.22□□□□□ -0.29
DDB1-218ENST00000540784 DIRC2Q96SL1 478 aa13.22□□□□□ -0.29
DDB1-218ENST00000540784 JAM3Q9BX67 310 aa13.22□□□□□ -0.29
DDB1-218ENST00000540784 CXXC4Q9H2H0 198 aa13.22□□□□□ -0.29
DDB1-218ENST00000540784 MOB1AQ9H8S9 216 aa13.22□□□□□ -0.29
DDB1-218ENST00000540784 DECR2Q9NUI1 292 aa13.22□□□□□ -0.29
DDB1-218ENST00000540784 NUFIP1Q9UHK0 495 aaKnown RBP13.22□□□□□ -0.29
DDB1-218ENST00000540784 ZNF391Q9UJN7 358 aa13.22□□□□□ -0.29
DDB1-218ENST00000540784 DIMT1Q9UNQ2 313 aaKnown RBP13.22□□□□□ -0.29
DDB1-218ENST00000540784 EXOSC1Q9Y3B2 195 aaKnown RBP13.22□□□□□ -0.29
DDB1-218ENST00000540784 NAV2Q8IVL1 2488 aa13.22□□□□□ -0.29
DDB1-218ENST00000540784 A0A0U1RQV5 110 aa13.21□□□□□ -0.29
DDB1-218ENST00000540784 PTGES3LE9PB15 166 aa13.21□□□□□ -0.29
DDB1-218ENST00000540784 TPD52L2O43399 206 aaKnown RBP13.21□□□□□ -0.29
DDB1-218ENST00000540784 PIPP12273 146 aaPredicted RBP13.21□□□□□ -0.29
DDB1-218ENST00000540784 PSMB10P40306 273 aa13.21□□□□□ -0.29
DDB1-218ENST00000540784 GSK3AP49840 483 aa13.21□□□□□ -0.29
DDB1-218ENST00000540784 ETV1P50549 477 aa13.21□□□□□ -0.29
DDB1-218ENST00000540784 PRSS57Q6UWY2 283 aa13.21□□□□□ -0.29
DDB1-218ENST00000540784 TMPRSS11AQ6ZMR5 421 aa13.21□□□□□ -0.29
DDB1-218ENST00000540784 ELMOD2Q8IZ81 293 aa13.21□□□□□ -0.29
DDB1-218ENST00000540784 SYS1Q8N2H4 156 aa13.21□□□□□ -0.29
DDB1-218ENST00000540784 BHLHE23Q8NDY6 225 aa13.21□□□□□ -0.29
DDB1-218ENST00000540784 OR2Z1Q8NG97 314 aa13.21□□□□□ -0.29
DDB1-218ENST00000540784 C4orf36Q96KX1 117 aa13.21□□□□□ -0.29
DDB1-218ENST00000540784 ZNF649Q9BS31 505 aa13.21□□□□□ -0.29
DDB1-218ENST00000540784 ISG20L2Q9H9L3 353 aaKnown RBP13.21□□□□□ -0.29
DDB1-218ENST00000540784 G6PC2Q9NQR9 355 aa13.21□□□□□ -0.29
DDB1-218ENST00000540784 ACOXLQ9NUZ1 547 aa13.21□□□□□ -0.29
DDB1-218ENST00000540784 NKIRAS2Q9NYR9 191 aa13.21□□□□□ -0.29
DDB1-218ENST00000540784 TPRKBQ9Y3C4 175 aa13.21□□□□□ -0.29
DDB1-218ENST00000540784 ANKRD17O75179 2603 aaKnown RBP13.21□□□□□ -0.3
DDB1-218ENST00000540784 ZSCAN5BA6NJL1 495 aa13.2□□□□□ -0.3
DDB1-218ENST00000540784 DENRO43583 198 aaKnown RBP13.2□□□□□ -0.3
DDB1-218ENST00000540784 LY6HO94772 140 aa13.2□□□□□ -0.3
DDB1-218ENST00000540784 IGHV1-46P01743 117 aa13.2□□□□□ -0.3
DDB1-218ENST00000540784 TTRP02766 147 aa13.2□□□□□ -0.3
DDB1-218ENST00000540784 LIMS3P0CW19 117 aa13.2□□□□□ -0.3
DDB1-218ENST00000540784 LIMS4P0CW20 117 aa13.2□□□□□ -0.3
DDB1-218ENST00000540784 TNFSF4P23510 183 aa13.2□□□□□ -0.3
DDB1-218ENST00000540784 MAGEB1P43366 347 aa13.2□□□□□ -0.3
DDB1-218ENST00000540784 CCL8P80075 99 aa13.2□□□□□ -0.3
DDB1-218ENST00000540784 Q6ZR03 302 aa13.2□□□□□ -0.3
DDB1-218ENST00000540784 AHSA2Q719I0 299 aa13.2□□□□□ -0.3
DDB1-218ENST00000540784 COMMD2Q86X83 199 aa13.2□□□□□ -0.3
DDB1-218ENST00000540784 CATSPERDQ86XM0 798 aa13.2□□□□□ -0.3
DDB1-218ENST00000540784 OR51E1Q8TCB6 317 aa13.2□□□□□ -0.3
DDB1-218ENST00000540784 UBASH3BQ8TF42 649 aa13.2□□□□□ -0.3
DDB1-218ENST00000540784 MYDGFQ969H8 173 aa13.2□□□□□ -0.3
DDB1-218ENST00000540784 ITFG2Q969R8 447 aa13.2□□□□□ -0.3
DDB1-218ENST00000540784 LYZL4Q96KX0 146 aa13.2□□□□□ -0.3
DDB1-218ENST00000540784 SLC30A2Q9BRI3 323 aa13.2□□□□□ -0.3
DDB1-218ENST00000540784 RHNO1Q9BSD3 238 aa13.2□□□□□ -0.3
DDB1-218ENST00000540784 EGLN1Q9GZT9 426 aa13.2□□□□□ -0.3
DDB1-218ENST00000540784 GPR84Q9NQS5 396 aa13.2□□□□□ -0.3
DDB1-218ENST00000540784 SLC22A13Q9Y226 551 aa13.2□□□□□ -0.3
DDB1-218ENST00000540784 CAB39Q9Y376 341 aaPredicted RBP13.2□□□□□ -0.3
DDB1-218ENST00000540784 CSMD2Q7Z408 3487 aa13.19□□□□□ -0.3
DDB1-218ENST00000540784 hCG_38984A0A1B0GV85 526 aa13.19□□□□□ -0.3
DDB1-218ENST00000540784 ANKRD30BLA7E2S9 258 aa13.19□□□□□ -0.3
DDB1-218ENST00000540784 SLC1A7O00341 560 aa13.19□□□□□ -0.3
DDB1-218ENST00000540784 LILRA1O75019 489 aa13.19□□□□□ -0.3
DDB1-218ENST00000540784 ADH4P08319 380 aa13.19□□□□□ -0.3
DDB1-218ENST00000540784 HTR1AP08908 422 aa13.19□□□□□ -0.3
DDB1-218ENST00000540784 CCDC159P0C7I6 412 aa13.19□□□□□ -0.3
DDB1-218ENST00000540784 DAOP14920 347 aa13.19□□□□□ -0.3
DDB1-218ENST00000540784 MAP2K3P46734 347 aa13.19□□□□□ -0.3
DDB1-218ENST00000540784 GBX2P52951 348 aaPredicted RBP13.19□□□□□ -0.3
DDB1-218ENST00000540784 DSCR9P59020 149 aa13.19□□□□□ -0.3
DDB1-218ENST00000540784 MVKQ03426 396 aa13.19□□□□□ -0.3
DDB1-218ENST00000540784 MRPL28Q13084 256 aaKnown RBP13.19□□□□□ -0.3
DDB1-218ENST00000540784 FAM209AQ5JX71 171 aa13.19□□□□□ -0.3
DDB1-218ENST00000540784 Q5PR19 223 aa13.19□□□□□ -0.3
DDB1-218ENST00000540784 FDX2Q6P4F2 183 aa13.19□□□□□ -0.3
DDB1-218ENST00000540784 KLHL36Q8N4N3 616 aa13.19□□□□□ -0.3
DDB1-218ENST00000540784 CSNK2A3Q8NEV1 391 aa13.19□□□□□ -0.3
DDB1-218ENST00000540784 OR56B2PQ8NGI1 322 aa13.19□□□□□ -0.3
DDB1-218ENST00000540784 PELI1Q96FA3 418 aa13.19□□□□□ -0.3
DDB1-218ENST00000540784 SLC22A4Q9H015 551 aa13.19□□□□□ -0.3
DDB1-218ENST00000540784 FKBP14Q9NWM8 211 aa13.19□□□□□ -0.3
DDB1-218ENST00000540784 MRPL15Q9P015 296 aaKnown RBP13.19□□□□□ -0.3
DDB1-218ENST00000540784 CLEC2DQ9UHP7 191 aa13.19□□□□□ -0.3
DDB1-218ENST00000540784 NOP16Q9Y3C1 178 aaKnown RBP13.19□□□□□ -0.3
DDB1-218ENST00000540784 P2RY10O00398 339 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms