RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 ACTG1P63261 375 aa17.53■□□□□ 0.4
CHFR-217ENST00000540537 EIF2B1Q14232 305 aaKnown RBP17.53■□□□□ 0.4
CHFR-217ENST00000540537 MPPED2Q15777 294 aa17.53■□□□□ 0.4
CHFR-217ENST00000540537 TUSC1Q2TAM9 212 aa17.53■□□□□ 0.4
CHFR-217ENST00000540537 DNAL1Q4LDG9 190 aa17.53■□□□□ 0.4
CHFR-217ENST00000540537 DCDC5Q6ZRR9 648 aa17.53■□□□□ 0.4
CHFR-217ENST00000540537 TRPM8Q7Z2W7 1104 aa17.53■□□□□ 0.4
CHFR-217ENST00000540537 TMEM179BQ7Z7N9 219 aa17.53■□□□□ 0.4
CHFR-217ENST00000540537 SPERTQ8NA61 448 aa17.53■□□□□ 0.4
CHFR-217ENST00000540537 SPSB4Q96A44 273 aa17.53■□□□□ 0.4
CHFR-217ENST00000540537 MED20Q9H944 212 aa17.53■□□□□ 0.4
CHFR-217ENST00000540537 MARCH7Q9H992 704 aa17.53■□□□□ 0.4
CHFR-217ENST00000540537 UFSP2Q9NUQ7 469 aa17.53■□□□□ 0.4
CHFR-217ENST00000540537 PDP1Q9P0J1 537 aaPredicted RBP17.53■□□□□ 0.4
CHFR-217ENST00000540537 IGHV2-70DA0A0C4DH43 119 aa17.52■□□□□ 0.4
CHFR-217ENST00000540537 FAM183AA6NL82 134 aa17.52■□□□□ 0.4
CHFR-217ENST00000540537 GLCEO94923 617 aa17.52■□□□□ 0.4
CHFR-217ENST00000540537 APOC1P02654 83 aa17.52■□□□□ 0.4
CHFR-217ENST00000540537 PPIAL4GP0DN37 164 aa17.52■□□□□ 0.4
CHFR-217ENST00000540537 PAICSP22234 425 aaKnown RBP17.52■□□□□ 0.4
CHFR-217ENST00000540537 GSTT1P30711 240 aa17.52■□□□□ 0.4
CHFR-217ENST00000540537 PITPNBP48739 271 aa17.52■□□□□ 0.4
CHFR-217ENST00000540537 CX3CR1P49238 355 aa17.52■□□□□ 0.4
CHFR-217ENST00000540537 COMPP49747 757 aaPredicted RBP17.52■□□□□ 0.4
CHFR-217ENST00000540537 KLF17Q5JT82 389 aaPredicted RBP17.52■□□□□ 0.4
CHFR-217ENST00000540537 BTNL3Q6UXE8 466 aa17.52■□□□□ 0.4
CHFR-217ENST00000540537 LRRN1Q6UXK5 716 aa17.52■□□□□ 0.4
CHFR-217ENST00000540537 SPATC1Q76KD6 591 aa17.52■□□□□ 0.4
CHFR-217ENST00000540537 DPY19L4Q7Z388 723 aa17.52■□□□□ 0.4
CHFR-217ENST00000540537 ERI1Q8IV48 349 aaKnown RBP17.52■□□□□ 0.4
CHFR-217ENST00000540537 OR56B2PQ8NGI1 322 aa17.52■□□□□ 0.4
CHFR-217ENST00000540537 OR6N2Q8NGY6 317 aa17.52■□□□□ 0.4
CHFR-217ENST00000540537 RNF133Q8WVZ7 376 aa17.52■□□□□ 0.4
CHFR-217ENST00000540537 C22orf15Q8WYQ4 148 aa17.52■□□□□ 0.4
CHFR-217ENST00000540537 SP140LQ9H930 580 aa17.52■□□□□ 0.4
CHFR-217ENST00000540537 ESM1Q9NQ30 184 aa17.52■□□□□ 0.4
CHFR-217ENST00000540537 RNF7Q9UBF6 113 aa17.52■□□□□ 0.4
CHFR-217ENST00000540537 TENM1Q9UKZ4 2725 aa17.51■□□□□ 0.39
CHFR-217ENST00000540537 HSD11B1P28845 292 aa17.51■□□□□ 0.39
CHFR-217ENST00000540537 CD80P33681 288 aa17.51■□□□□ 0.39
CHFR-217ENST00000540537 DDOSTP39656 456 aa17.51■□□□□ 0.39
CHFR-217ENST00000540537 MZT1Q08AG7 82 aa17.51■□□□□ 0.39
CHFR-217ENST00000540537 RHOUQ7L0Q8 258 aa17.51■□□□□ 0.39
CHFR-217ENST00000540537 SHFQ7M4L6 423 aa17.51■□□□□ 0.39
CHFR-217ENST00000540537 ZDHHC22Q8N966 263 aa17.51■□□□□ 0.39
CHFR-217ENST00000540537 RAB40AQ8WXH6 277 aa17.51■□□□□ 0.39
CHFR-217ENST00000540537 DACT3Q96B18 629 aaPredicted RBP17.51■□□□□ 0.39
CHFR-217ENST00000540537 OTULINQ96BN8 352 aa17.51■□□□□ 0.39
CHFR-217ENST00000540537 ABHD6Q9BV23 337 aa17.51■□□□□ 0.39
CHFR-217ENST00000540537 CLN8Q9UBY8 286 aa17.51■□□□□ 0.39
CHFR-217ENST00000540537 N6AMT1Q9Y5N5 214 aa17.51■□□□□ 0.39
CHFR-217ENST00000540537 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.5■□□□□ 0.39
CHFR-217ENST00000540537 TMEM89A2RUT3 159 aa17.5■□□□□ 0.39
CHFR-217ENST00000540537 PHYHO14832 338 aa17.5■□□□□ 0.39
CHFR-217ENST00000540537 GYG2O15488 501 aa17.5■□□□□ 0.39
CHFR-217ENST00000540537 TBX1O43435 398 aa17.5■□□□□ 0.39
CHFR-217ENST00000540537 POU1F1P28069 291 aa17.5■□□□□ 0.39
CHFR-217ENST00000540537 FLOT2Q14254 428 aa17.5■□□□□ 0.39
CHFR-217ENST00000540537 GINS1Q14691 196 aa17.5■□□□□ 0.39
CHFR-217ENST00000540537 KCNJ8Q15842 424 aa17.5■□□□□ 0.39
CHFR-217ENST00000540537 DOK3Q7L591 496 aa17.5■□□□□ 0.39
CHFR-217ENST00000540537 TIGD4Q8IY51 512 aa17.5■□□□□ 0.39
CHFR-217ENST00000540537 YY1AP1Q9H869 796 aa17.5■□□□□ 0.39
CHFR-217ENST00000540537 ZNF556Q9HAH1 456 aa17.5■□□□□ 0.39
CHFR-217ENST00000540537 ZNF69Q9UC07 566 aa17.5■□□□□ 0.39
CHFR-217ENST00000540537 PRR23D1E9PI22 279 aaPredicted RBP17.49■□□□□ 0.39
CHFR-217ENST00000540537 LGALS8O00214 317 aa17.49■□□□□ 0.39
CHFR-217ENST00000540537 E2F6O75461 281 aa17.49■□□□□ 0.39
CHFR-217ENST00000540537 ANXA2P07355 339 aaKnown RBP17.49■□□□□ 0.39
CHFR-217ENST00000540537 PRR23D2P0DMB1 279 aaPredicted RBP17.49■□□□□ 0.39
CHFR-217ENST00000540537 OSMP13725 252 aa17.49■□□□□ 0.39
CHFR-217ENST00000540537 PSMB10P40306 273 aa17.49■□□□□ 0.39
CHFR-217ENST00000540537 OPRL1P41146 370 aa17.49■□□□□ 0.39
CHFR-217ENST00000540537 UBA52P62987 128 aaKnown RBP17.49■□□□□ 0.39
CHFR-217ENST00000540537 TIGD6Q17RP2 521 aa17.49■□□□□ 0.39
CHFR-217ENST00000540537 WDR25Q64LD2 544 aaPredicted RBP17.49■□□□□ 0.39
CHFR-217ENST00000540537 LYPD2Q6UXB3 125 aa17.49■□□□□ 0.39
CHFR-217ENST00000540537 RBMS3Q6XE24 437 aaKnown RBP17.49■□□□□ 0.39
CHFR-217ENST00000540537 SLC16A9Q7RTY1 509 aa17.49■□□□□ 0.39
CHFR-217ENST00000540537 SPATA24Q86W54 205 aa17.49■□□□□ 0.39
CHFR-217ENST00000540537 SIGLECL1Q8N7X8 197 aa17.49■□□□□ 0.39
CHFR-217ENST00000540537 OR52H1Q8NGJ2 320 aa17.49■□□□□ 0.39
CHFR-217ENST00000540537 BCAS4Q8TDM0 211 aa17.49■□□□□ 0.39
CHFR-217ENST00000540537 GCDHQ92947 438 aaPredicted RBP17.49■□□□□ 0.39
CHFR-217ENST00000540537 OR51V1Q9H2C8 321 aa17.49■□□□□ 0.39
CHFR-217ENST00000540537 TRIM36Q9NQ86 728 aa17.49■□□□□ 0.39
CHFR-217ENST00000540537 C14orf119Q9NWQ9 140 aa17.49■□□□□ 0.39
CHFR-217ENST00000540537 KIR2DS1A0A191URI9 304 aa17.48■□□□□ 0.39
CHFR-217ENST00000540537 ANKRD30BLA7E2S9 258 aa17.48■□□□□ 0.39
CHFR-217ENST00000540537 HMGN1P05114 100 aa17.48■□□□□ 0.39
CHFR-217ENST00000540537 ANXA8P13928 327 aa17.48■□□□□ 0.39
CHFR-217ENST00000540537 CFL1P23528 166 aaKnown RBP17.48■□□□□ 0.39
CHFR-217ENST00000540537 CBX1P83916 185 aa17.48■□□□□ 0.39
CHFR-217ENST00000540537 FAM3AP98173 230 aa17.48■□□□□ 0.39
CHFR-217ENST00000540537 CDK5Q00535 292 aa17.48■□□□□ 0.39
CHFR-217ENST00000540537 ZNF841Q6ZN19 808 aa17.48■□□□□ 0.39
CHFR-217ENST00000540537 PRSS45Q7RTY3 260 aa17.48■□□□□ 0.39
CHFR-217ENST00000540537 C19orf18Q8NEA5 215 aa17.48■□□□□ 0.39
CHFR-217ENST00000540537 SGK3Q96BR1 496 aa17.48■□□□□ 0.39
CHFR-217ENST00000540537 UPRTQ96BW1 309 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms