RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 SOCS1O15524 211 aa11.59□□□□□ -0.55
MSH6-210ENST00000540021 NUDT21O43809 227 aaKnown RBP11.59□□□□□ -0.55
MSH6-210ENST00000540021 SCGNO76038 276 aa11.59□□□□□ -0.55
MSH6-210ENST00000540021 DUS4LO95620 317 aaKnown RBP11.59□□□□□ -0.55
MSH6-210ENST00000540021 SSBP1Q04837 148 aaKnown RBP11.59□□□□□ -0.55
MSH6-210ENST00000540021 SGCBQ16585 318 aa11.59□□□□□ -0.55
MSH6-210ENST00000540021 OGFOD3Q6PK18 319 aa11.59□□□□□ -0.55
MSH6-210ENST00000540021 SLC25A42Q86VD7 318 aa11.59□□□□□ -0.55
MSH6-210ENST00000540021 SEMA6DQ8NFY4 1073 aa11.59□□□□□ -0.55
MSH6-210ENST00000540021 OR13C8Q8NGS7 320 aa11.59□□□□□ -0.55
MSH6-210ENST00000540021 OR14K1Q8NGZ2 314 aa11.59□□□□□ -0.55
MSH6-210ENST00000540021 TM4SF19Q96DZ7 209 aa11.59□□□□□ -0.55
MSH6-210ENST00000540021 KIRREL1Q96J84 757 aa11.59□□□□□ -0.55
MSH6-210ENST00000540021 OR10A2Q9H208 303 aa11.59□□□□□ -0.55
MSH6-210ENST00000540021 FLVCR1Q9Y5Y0 555 aa11.59□□□□□ -0.55
MSH6-210ENST00000540021 MBTPS2O43462 519 aa11.59□□□□□ -0.55
MSH6-210ENST00000540021 MUC1P15941 1255 aaPredicted RBP11.59□□□□□ -0.55
MSH6-210ENST00000540021 PRSS12P56730 875 aa11.59□□□□□ -0.55
MSH6-210ENST00000540021 SLC26A5P58743 744 aa11.59□□□□□ -0.55
MSH6-210ENST00000540021 RSU1Q15404 277 aa11.59□□□□□ -0.55
MSH6-210ENST00000540021 ETV3LQ6ZN32 361 aa11.59□□□□□ -0.55
MSH6-210ENST00000540021 TMEM104Q8NE00 496 aa11.59□□□□□ -0.55
MSH6-210ENST00000540021 OR9K2Q8NGE7 335 aa11.59□□□□□ -0.55
MSH6-210ENST00000540021 EDAQ92838 391 aa11.59□□□□□ -0.55
MSH6-210ENST00000540021 CLCC1Q96S66 551 aa11.59□□□□□ -0.55
MSH6-210ENST00000540021 ZNF304Q9HCX3 659 aa11.59□□□□□ -0.55
MSH6-210ENST00000540021 ANKRD10Q9NXR5 420 aa11.59□□□□□ -0.55
MSH6-210ENST00000540021 OR5AC2Q9NZP5 309 aa11.59□□□□□ -0.55
MSH6-210ENST00000540021 LUZP4Q9P127 313 aa11.59□□□□□ -0.55
MSH6-210ENST00000540021 NXT1Q9UKK6 140 aaKnown RBP11.59□□□□□ -0.55
MSH6-210ENST00000540021 MKI67P46013 3256 aaKnown RBP11.59□□□□□ -0.55
MSH6-210ENST00000540021 A0A1W2PNR3 127 aa11.59□□□□□ -0.55
MSH6-210ENST00000540021 A6NLC8 198 aa11.59□□□□□ -0.55
MSH6-210ENST00000540021 UMAD1C9J7I0 102 aa11.59□□□□□ -0.55
MSH6-210ENST00000540021 IFNA17P01571 189 aa11.59□□□□□ -0.55
MSH6-210ENST00000540021 GNRHRP30968 328 aa11.59□□□□□ -0.55
MSH6-210ENST00000540021 CX3CR1P49238 355 aa11.59□□□□□ -0.55
MSH6-210ENST00000540021 DHODHQ02127 395 aa11.59□□□□□ -0.55
MSH6-210ENST00000540021 PPA1Q15181 289 aa11.59□□□□□ -0.55
MSH6-210ENST00000540021 FAM189A2Q15884 450 aa11.59□□□□□ -0.55
MSH6-210ENST00000540021 MITD1Q8WV92 249 aa11.59□□□□□ -0.55
MSH6-210ENST00000540021 TCTN2Q96GX1 697 aa11.59□□□□□ -0.55
MSH6-210ENST00000540021 ZNF2Q9BSG1 426 aaPredicted RBP11.59□□□□□ -0.55
MSH6-210ENST00000540021 CTSFQ9UBX1 484 aa11.59□□□□□ -0.55
MSH6-210ENST00000540021 PRAMEF26H0Y7S4 382 aa11.58□□□□□ -0.56
MSH6-210ENST00000540021 PTAFRP25105 342 aa11.58□□□□□ -0.56
MSH6-210ENST00000540021 PABPC1L2AQ5JQF8 200 aa11.58□□□□□ -0.56
MSH6-210ENST00000540021 SOHLH1Q5JUK2 328 aa11.58□□□□□ -0.56
MSH6-210ENST00000540021 CLEC18BQ6UXF7 455 aa11.58□□□□□ -0.56
MSH6-210ENST00000540021 OR2I1PQ8NGU4 316 aa11.58□□□□□ -0.56
MSH6-210ENST00000540021 DDIT4LQ96D03 193 aa11.58□□□□□ -0.56
MSH6-210ENST00000540021 NMNAT2Q9BZQ4 307 aa11.58□□□□□ -0.56
MSH6-210ENST00000540021 ZCCHC4Q9H5U6 513 aa11.58□□□□□ -0.56
MSH6-210ENST00000540021 B3GALT5Q9Y2C3 310 aa11.58□□□□□ -0.56
MSH6-210ENST00000540021 KCNK7Q9Y2U2 307 aa11.58□□□□□ -0.56
MSH6-210ENST00000540021 MMP24Q9Y5R2 645 aa11.58□□□□□ -0.56
MSH6-210ENST00000540021 H7C1Q1 480 aa11.58□□□□□ -0.56
MSH6-210ENST00000540021 TMEM127O75204 238 aa11.58□□□□□ -0.56
MSH6-210ENST00000540021 GLP1RP43220 463 aa11.58□□□□□ -0.56
MSH6-210ENST00000540021 OR3A4PP47883 348 aa11.58□□□□□ -0.56
MSH6-210ENST00000540021 HSF1Q00613 529 aa11.58□□□□□ -0.56
MSH6-210ENST00000540021 INSM1Q01101 510 aaPredicted RBP11.58□□□□□ -0.56
MSH6-210ENST00000540021 KIAA0141Q14154 515 aaPredicted RBP11.58□□□□□ -0.56
MSH6-210ENST00000540021 NCMAPQ5T1S8 102 aa11.58□□□□□ -0.56
MSH6-210ENST00000540021 FBXW12Q6X9E4 464 aa11.58□□□□□ -0.56
MSH6-210ENST00000540021 OR5L1Q8NGL2 311 aa11.58□□□□□ -0.56
MSH6-210ENST00000540021 ZDHHC12Q96GR4 267 aa11.58□□□□□ -0.56
MSH6-210ENST00000540021 SLC5A7Q9GZV3 580 aa11.58□□□□□ -0.56
MSH6-210ENST00000540021 ALX4Q9H161 411 aaPredicted RBP11.58□□□□□ -0.56
MSH6-210ENST00000540021 ZNF442Q9H7R0 627 aa11.58□□□□□ -0.56
MSH6-210ENST00000540021 SLC17A5Q9NRA2 495 aa11.58□□□□□ -0.56
MSH6-210ENST00000540021 C1orf123Q9NWV4 160 aa11.58□□□□□ -0.56
MSH6-210ENST00000540021 KLF15Q9UIH9 416 aa11.58□□□□□ -0.56
MSH6-210ENST00000540021 TRBV5-7A0A0A0MS05 114 aa11.58□□□□□ -0.56
MSH6-210ENST00000540021 RNF222A6NCQ9 220 aa11.58□□□□□ -0.56
MSH6-210ENST00000540021 MT-ATP6P00846 226 aa11.58□□□□□ -0.56
MSH6-210ENST00000540021 HEXBP07686 556 aa11.58□□□□□ -0.56
MSH6-210ENST00000540021 MST1P26927 711 aa11.58□□□□□ -0.56
MSH6-210ENST00000540021 GPR3P46089 330 aa11.58□□□□□ -0.56
MSH6-210ENST00000540021 F2RL1P55085 397 aa11.58□□□□□ -0.56
MSH6-210ENST00000540021 SKP2Q13309 424 aa11.58□□□□□ -0.56
MSH6-210ENST00000540021 MIDNQ504T8 468 aa11.58□□□□□ -0.56
MSH6-210ENST00000540021 TMEM182Q6ZP80 229 aaPredicted RBP11.58□□□□□ -0.56
MSH6-210ENST00000540021 GRINAQ7Z429 371 aa11.58□□□□□ -0.56
MSH6-210ENST00000540021 TMEM217Q8N7C4 229 aa11.58□□□□□ -0.56
MSH6-210ENST00000540021 LILRB1Q8NHL6 650 aaPredicted RBP11.58□□□□□ -0.56
MSH6-210ENST00000540021 C11orf40Q8WZ69 217 aa11.58□□□□□ -0.56
MSH6-210ENST00000540021 LAT2Q9GZY6 243 aa11.58□□□□□ -0.56
MSH6-210ENST00000540021 PLEK2Q9NYT0 353 aa11.58□□□□□ -0.56
MSH6-210ENST00000540021 C5orf42Q9H799 3197 aa11.57□□□□□ -0.56
MSH6-210ENST00000540021 TRBV23-1A0A0A0MS06 115 aa11.57□□□□□ -0.56
MSH6-210ENST00000540021 A0A1W2PPH5 198 aa11.57□□□□□ -0.56
MSH6-210ENST00000540021 IL33O95760 270 aa11.57□□□□□ -0.56
MSH6-210ENST00000540021 CD1AP06126 327 aa11.57□□□□□ -0.56
MSH6-210ENST00000540021 HSD11B2P80365 405 aa11.57□□□□□ -0.56
MSH6-210ENST00000540021 ZDHHC22Q8N966 263 aa11.57□□□□□ -0.56
MSH6-210ENST00000540021 ASB13Q8WXK3 278 aa11.57□□□□□ -0.56
MSH6-210ENST00000540021 ARL5BQ96KC2 179 aa11.57□□□□□ -0.56
MSH6-210ENST00000540021 C2orf50Q96LR7 162 aa11.57□□□□□ -0.56
MSH6-210ENST00000540021 GAS2L1Q99501 681 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms