RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 TO15178 435 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 PRKRAO75569 313 aaKnown RBP6.82□□□□□ -1.32
CCDC60-204ENST00000539847 DUS4LO95620 317 aaKnown RBP6.82□□□□□ -1.32
CCDC60-204ENST00000539847 CYB5AP00167 134 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 MT-ND4LP03901 98 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 PCCBP05166 539 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 GYPBP06028 91 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 CD5P06127 495 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 SLC35G6P0C7Q6 338 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 SLC35E2P0CK97 266 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 CCL4P13236 92 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 LIFP15018 202 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 FOSL1P15407 271 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 MAOAP21397 527 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 PTAFRP25105 342 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 AK4P27144 223 aaPredicted RBP6.82□□□□□ -1.32
CCDC60-204ENST00000539847 ADMP35318 185 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 MAS1LP35410 378 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 RPL4P36578 427 aaKnown RBP6.82□□□□□ -1.32
CCDC60-204ENST00000539847 NAA10P41227 235 aaPredicted RBP6.82□□□□□ -1.32
CCDC60-204ENST00000539847 FASLGP48023 281 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 POU3F4P49335 361 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 CAV2P51636 162 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 CLDN12P56749 244 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 ROM1Q03395 351 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 KLRB1Q12918 225 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 PDZK1IP1Q13113 114 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 KIR2DS3Q14952 304 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 TEX30Q5JUR7 227 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 DNLZQ5SXM8 178 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 TMEM244Q5VVB8 128 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 H3F3CQ6NXT2 135 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 TMEM71Q6P5X7 295 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 WDR74Q6RFH5 385 aaPredicted RBP6.82□□□□□ -1.32
CCDC60-204ENST00000539847 ZNF704Q6ZNC4 412 aaPredicted RBP6.82□□□□□ -1.32
CCDC60-204ENST00000539847 VN1R4Q7Z5H5 301 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 RFLNBQ8N5W9 214 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 ZNF676Q8N7Q3 588 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 LRRC75AQ8NAA5 344 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 AVL9Q8NBF6 648 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 OR52E1Q8NGJ3 308 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 OR1J2Q8NGS2 313 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 PPP1R1CQ8WVI7 109 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 MALSU1Q96EH3 234 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 SLC41A2Q96JW4 573 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 C4orf45Q96LM5 186 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 SCGB3A2Q96PL1 93 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 NUDT22Q9BRQ3 303 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 G6PC3Q9BUM1 346 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 PHPT1Q9NRX4 125 aaPredicted RBP6.82□□□□□ -1.32
CCDC60-204ENST00000539847 PPP4R1LQ9P1A2 415 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 RCC2Q9P258 522 aaKnown RBP6.82□□□□□ -1.32
CCDC60-204ENST00000539847 FBLN5Q9UBX5 448 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 TMEM184BQ9Y519 407 aaPredicted RBP6.82□□□□□ -1.32
CCDC60-204ENST00000539847 WIF1Q9Y5W5 379 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 B3GALT1Q9Y5Z6 326 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 LRRK1Q38SD2 2015 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 LRP4O75096 1905 aa6.82□□□□□ -1.32
CCDC60-204ENST00000539847 ITPR2Q14571 2701 aa6.81□□□□□ -1.32
CCDC60-204ENST00000539847 IGHV1OR21-1A0A087WYE8 117 aa6.81□□□□□ -1.32
CCDC60-204ENST00000539847 CENPVL1A0A0U1RR11 272 aa6.81□□□□□ -1.32
CCDC60-204ENST00000539847 LOC390937A0A1W2PQ73 354 aa6.81□□□□□ -1.32
CCDC60-204ENST00000539847 A0A1W2PS29 197 aa6.81□□□□□ -1.32
CCDC60-204ENST00000539847 C9orf170A2RU37 121 aa6.81□□□□□ -1.32
CCDC60-204ENST00000539847 WRBO00258 174 aa6.81□□□□□ -1.32
CCDC60-204ENST00000539847 GPR31O00270 319 aa6.81□□□□□ -1.32
CCDC60-204ENST00000539847 PEX12O00623 359 aa6.81□□□□□ -1.32
CCDC60-204ENST00000539847 ZNF208O43345 1280 aa6.81□□□□□ -1.32
CCDC60-204ENST00000539847 WIPF1O43516 503 aa6.81□□□□□ -1.32
CCDC60-204ENST00000539847 EIF1BO60739 113 aaKnown RBP6.81□□□□□ -1.32
CCDC60-204ENST00000539847 ZNF205O95201 554 aa6.81□□□□□ -1.32
CCDC60-204ENST00000539847 PLGP00747 810 aaPredicted RBP6.81□□□□□ -1.32
CCDC60-204ENST00000539847 CEACAM5P06731 702 aa6.81□□□□□ -1.32
CCDC60-204ENST00000539847 CRHP06850 196 aa6.81□□□□□ -1.32
CCDC60-204ENST00000539847 FABP1P07148 127 aa6.81□□□□□ -1.32
CCDC60-204ENST00000539847 NGFRP08138 427 aa6.81□□□□□ -1.32
CCDC60-204ENST00000539847 ACAA1P09110 424 aaPredicted RBP6.81□□□□□ -1.32
CCDC60-204ENST00000539847 IGFBP3P17936 291 aaPredicted RBP6.81□□□□□ -1.32
CCDC60-204ENST00000539847 RCC1P18754 421 aaPredicted RBP6.81□□□□□ -1.32
CCDC60-204ENST00000539847 AGAP20933 346 aa6.81□□□□□ -1.32
CCDC60-204ENST00000539847 SDHAP31040 664 aa6.81□□□□□ -1.32
CCDC60-204ENST00000539847 GABRA3P34903 492 aa6.81□□□□□ -1.32
CCDC60-204ENST00000539847 EIF1P41567 113 aaKnown RBP6.81□□□□□ -1.32
CCDC60-204ENST00000539847 PNLIPRP2P54317 469 aa6.81□□□□□ -1.32
CCDC60-204ENST00000539847 OR1D5P58170 312 aa6.81□□□□□ -1.32
CCDC60-204ENST00000539847 CD81P60033 236 aa6.81□□□□□ -1.32
CCDC60-204ENST00000539847 SSTP61278 116 aa6.81□□□□□ -1.32
CCDC60-204ENST00000539847 OC90Q02509 493 aaPredicted RBP6.81□□□□□ -1.32
CCDC60-204ENST00000539847 AIMP2Q13155 320 aaKnown RBP6.81□□□□□ -1.32
CCDC60-204ENST00000539847 RUNX2Q13950 521 aa6.81□□□□□ -1.32
CCDC60-204ENST00000539847 ZNHIT3Q15649 155 aaPredicted RBP6.81□□□□□ -1.32
CCDC60-204ENST00000539847 FAM189A2Q15884 450 aa6.81□□□□□ -1.32
CCDC60-204ENST00000539847 PRICKLE4Q2TBC4 344 aa6.81□□□□□ -1.32
CCDC60-204ENST00000539847 TRMT12Q53H54 448 aaKnown RBP6.81□□□□□ -1.32
CCDC60-204ENST00000539847 EEF1A1P5Q5VTE0 462 aa6.81□□□□□ -1.32
CCDC60-204ENST00000539847 FCRLBQ6BAA4 426 aa6.81□□□□□ -1.32
CCDC60-204ENST00000539847 FAAP20Q6NZ36 180 aa6.81□□□□□ -1.32
CCDC60-204ENST00000539847 FBXO42Q6P3S6 717 aa6.81□□□□□ -1.32
CCDC60-204ENST00000539847 BPIFB2Q8N4F0 458 aa6.81□□□□□ -1.32
CCDC60-204ENST00000539847 PAQR4Q8N4S7 273 aaPredicted RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms