RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 ANXA2P07355 339 aaKnown RBP13.32□□□□□ -0.28
DDB1-216ENST00000539739 BTF3P20290 206 aaKnown RBP13.32□□□□□ -0.28
DDB1-216ENST00000539739 NR4A1P22736 598 aa13.32□□□□□ -0.28
DDB1-216ENST00000539739 WNT5AP41221 380 aa13.32□□□□□ -0.28
DDB1-216ENST00000539739 PSMA6P60900 246 aaKnown RBP13.32□□□□□ -0.28
DDB1-216ENST00000539739 LIPNQ5VXI9 398 aa13.32□□□□□ -0.28
DDB1-216ENST00000539739 OR5L1Q8NGL2 311 aa13.32□□□□□ -0.28
DDB1-216ENST00000539739 HAVCR2Q8TDQ0 301 aa13.32□□□□□ -0.28
DDB1-216ENST00000539739 APOBEC3DQ96AK3 386 aaPredicted RBP13.32□□□□□ -0.28
DDB1-216ENST00000539739 TMIGD2Q96BF3 282 aa13.32□□□□□ -0.28
DDB1-216ENST00000539739 C1QTNF5Q9BXJ0 243 aa13.32□□□□□ -0.28
DDB1-216ENST00000539739 CDCA4Q9BXL8 241 aa13.32□□□□□ -0.28
DDB1-216ENST00000539739 CLEC2DQ9UHP7 191 aa13.32□□□□□ -0.28
DDB1-216ENST00000539739 A0A0B4J203 849 aa13.31□□□□□ -0.28
DDB1-216ENST00000539739 TMEM129A0AVI4 362 aa13.31□□□□□ -0.28
DDB1-216ENST00000539739 ACOD1A6NK06 481 aa13.31□□□□□ -0.28
DDB1-216ENST00000539739 VSTM5A8MXK1 200 aa13.31□□□□□ -0.28
DDB1-216ENST00000539739 TRIM77I1YAP6 450 aa13.31□□□□□ -0.28
DDB1-216ENST00000539739 ADRA2AP08913 450 aa13.31□□□□□ -0.28
DDB1-216ENST00000539739 FAM157BP0CG42 384 aa13.31□□□□□ -0.28
DDB1-216ENST00000539739 JUNBP17275 347 aaPredicted RBP13.31□□□□□ -0.28
DDB1-216ENST00000539739 LOXP28300 417 aaPredicted RBP13.31□□□□□ -0.28
DDB1-216ENST00000539739 ZNF121P58317 390 aaPredicted RBP13.31□□□□□ -0.28
DDB1-216ENST00000539739 RPS23P62266 143 aaKnown RBP13.31□□□□□ -0.28
DDB1-216ENST00000539739 HGFACQ04756 655 aa13.31□□□□□ -0.28
DDB1-216ENST00000539739 MRPL28Q13084 256 aaKnown RBP13.31□□□□□ -0.28
DDB1-216ENST00000539739 SNTB2Q13425 540 aaKnown RBP13.31□□□□□ -0.28
DDB1-216ENST00000539739 ZNF544Q6NX49 715 aa13.31□□□□□ -0.28
DDB1-216ENST00000539739 FIP1L1Q6UN15 594 aaKnown RBP13.31□□□□□ -0.28
DDB1-216ENST00000539739 ZNF704Q6ZNC4 412 aaPredicted RBP13.31□□□□□ -0.28
DDB1-216ENST00000539739 NUP37Q8NFH4 326 aa13.31□□□□□ -0.28
DDB1-216ENST00000539739 OR52N1Q8NH53 320 aa13.31□□□□□ -0.28
DDB1-216ENST00000539739 ABHD4Q8TB40 342 aa13.31□□□□□ -0.28
DDB1-216ENST00000539739 HS3ST6Q96QI5 342 aa13.31□□□□□ -0.28
DDB1-216ENST00000539739 TMEM204Q9BSN7 226 aa13.31□□□□□ -0.28
DDB1-216ENST00000539739 MND1Q9BWT6 205 aa13.31□□□□□ -0.28
DDB1-216ENST00000539739 OR51B6Q9H340 312 aa13.31□□□□□ -0.28
DDB1-216ENST00000539739 BRD7Q9NPI1 651 aa13.31□□□□□ -0.28
DDB1-216ENST00000539739 ENPP5Q9UJA9 477 aa13.31□□□□□ -0.28
DDB1-216ENST00000539739 SNX5Q9Y5X3 404 aa13.31□□□□□ -0.28
DDB1-216ENST00000539739 R4GMQ9 66 aa13.31□□□□□ -0.28
DDB1-216ENST00000539739 SHISA9B4DS77 424 aa13.31□□□□□ -0.28
DDB1-216ENST00000539739 SMPD2O60906 423 aa13.31□□□□□ -0.28
DDB1-216ENST00000539739 PEX14O75381 377 aa13.31□□□□□ -0.28
DDB1-216ENST00000539739 MT-ND2P03891 347 aa13.31□□□□□ -0.28
DDB1-216ENST00000539739 LCKP06239 509 aa13.31□□□□□ -0.28
DDB1-216ENST00000539739 SLC2A1P11166 492 aa13.31□□□□□ -0.28
DDB1-216ENST00000539739 TUBG1P23258 451 aa13.31□□□□□ -0.28
DDB1-216ENST00000539739 MMP16P51512 607 aa13.31□□□□□ -0.28
DDB1-216ENST00000539739 GBX2P52951 348 aaPredicted RBP13.31□□□□□ -0.28
DDB1-216ENST00000539739 BAMBIQ13145 260 aa13.31□□□□□ -0.28
DDB1-216ENST00000539739 CLVS2Q5SYC1 327 aa13.31□□□□□ -0.28
DDB1-216ENST00000539739 COLCA1Q6ZS62 124 aa13.31□□□□□ -0.28
DDB1-216ENST00000539739 NAA40Q86UY6 237 aa13.31□□□□□ -0.28
DDB1-216ENST00000539739 ZNF101Q8IZC7 436 aa13.31□□□□□ -0.28
DDB1-216ENST00000539739 KBTBD8Q8NFY9 601 aa13.31□□□□□ -0.28
DDB1-216ENST00000539739 OR52H1Q8NGJ2 320 aa13.31□□□□□ -0.28
DDB1-216ENST00000539739 OR1J1Q8NGS3 322 aa13.31□□□□□ -0.28
DDB1-216ENST00000539739 SPRYD4Q8WW59 207 aaPredicted RBP13.31□□□□□ -0.28
DDB1-216ENST00000539739 PGAM5Q96HS1 289 aa13.31□□□□□ -0.28
DDB1-216ENST00000539739 MOB1AQ9H8S9 216 aa13.31□□□□□ -0.28
DDB1-216ENST00000539739 ISG20L2Q9H9L3 353 aaKnown RBP13.31□□□□□ -0.28
DDB1-216ENST00000539739 TUBG2Q9NRH3 451 aa13.31□□□□□ -0.28
DDB1-216ENST00000539739 ACOXLQ9NUZ1 547 aa13.31□□□□□ -0.28
DDB1-216ENST00000539739 GTF2A1LQ9UNN4 478 aa13.31□□□□□ -0.28
DDB1-216ENST00000539739 ABCA4P78363 2273 aa13.31□□□□□ -0.28
DDB1-216ENST00000539739 A0A1W2PPW3 197 aa13.3□□□□□ -0.28
DDB1-216ENST00000539739 LOC110117498-PIK3R3F6TDL0 507 aa13.3□□□□□ -0.28
DDB1-216ENST00000539739 TBX1O43435 398 aa13.3□□□□□ -0.28
DDB1-216ENST00000539739 PLAUP00749 431 aa13.3□□□□□ -0.28
DDB1-216ENST00000539739 NGFP01138 241 aa13.3□□□□□ -0.28
DDB1-216ENST00000539739 HTR1AP08908 422 aa13.3□□□□□ -0.28
DDB1-216ENST00000539739 TRAPPC2P0DI81 140 aa13.3□□□□□ -0.28
DDB1-216ENST00000539739 TRAPPC2BP0DI82 140 aa13.3□□□□□ -0.28
DDB1-216ENST00000539739 GLRXP35754 106 aa13.3□□□□□ -0.28
DDB1-216ENST00000539739 OR3A3P47888 321 aa13.3□□□□□ -0.28
DDB1-216ENST00000539739 WNT4P56705 351 aa13.3□□□□□ -0.28
DDB1-216ENST00000539739 PPP1CBP62140 327 aa13.3□□□□□ -0.28
DDB1-216ENST00000539739 MALLQ13021 153 aa13.3□□□□□ -0.28
DDB1-216ENST00000539739 OR2G6Q5TZ20 316 aa13.3□□□□□ -0.28
DDB1-216ENST00000539739 VHLLQ6RSH7 139 aa13.3□□□□□ -0.28
DDB1-216ENST00000539739 FAM57BQ71RH2 274 aa13.3□□□□□ -0.28
DDB1-216ENST00000539739 NANOGP1Q8N7R0 232 aa13.3□□□□□ -0.28
DDB1-216ENST00000539739 PELI1Q96FA3 418 aa13.3□□□□□ -0.28
DDB1-216ENST00000539739 SIGLEC11Q96RL6 698 aa13.3□□□□□ -0.28
DDB1-216ENST00000539739 OR10A2Q9H208 303 aa13.3□□□□□ -0.28
DDB1-216ENST00000539739 AKIP1Q9NQ31 210 aa13.3□□□□□ -0.28
DDB1-216ENST00000539739 FAM206AQ9NX38 181 aa13.3□□□□□ -0.28
DDB1-216ENST00000539739 STARD10Q9Y365 291 aa13.3□□□□□ -0.28
DDB1-216ENST00000539739 FAM221AA4D161 298 aa13.29□□□□□ -0.28
DDB1-216ENST00000539739 J3QRK9 145 aa13.29□□□□□ -0.28
DDB1-216ENST00000539739 CTAG2O75638 210 aa13.29□□□□□ -0.28
DDB1-216ENST00000539739 TALDO1P37837 337 aa13.29□□□□□ -0.28
DDB1-216ENST00000539739 PSMB10P40306 273 aa13.29□□□□□ -0.28
DDB1-216ENST00000539739 NKX6-1P78426 367 aaPredicted RBP13.29□□□□□ -0.28
DDB1-216ENST00000539739 IRF3Q14653 427 aa13.29□□□□□ -0.28
DDB1-216ENST00000539739 ZNF672Q499Z4 452 aaPredicted RBP13.29□□□□□ -0.28
DDB1-216ENST00000539739 RGS7BPQ6MZT1 257 aaPredicted RBP13.29□□□□□ -0.28
DDB1-216ENST00000539739 ZNF600Q6ZNG1 722 aa13.29□□□□□ -0.28
DDB1-216ENST00000539739 SVOPQ8N4V2 548 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms