RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 ARHGAP5-AS1Q96IT6 56 aa12.42□□□□□ -0.42
UBE3B-210ENST00000539599 GPER1Q99527 375 aa12.42□□□□□ -0.42
UBE3B-210ENST00000539599 SCPEP1Q9HB40 452 aa12.42□□□□□ -0.42
UBE3B-210ENST00000539599 SEMA5BQ9P283 1151 aa12.42□□□□□ -0.42
UBE3B-210ENST00000539599 MBD2Q9UBB5 411 aa12.42□□□□□ -0.42
UBE3B-210ENST00000539599 PFDN2Q9UHV9 154 aa12.42□□□□□ -0.42
UBE3B-210ENST00000539599 B3GALT5Q9Y2C3 310 aa12.42□□□□□ -0.42
UBE3B-210ENST00000539599 OR5H15A6NDH6 313 aa12.42□□□□□ -0.42
UBE3B-210ENST00000539599 DISC1C4P0D8 188 aa12.42□□□□□ -0.42
UBE3B-210ENST00000539599 SULT1C2O00338 296 aa12.42□□□□□ -0.42
UBE3B-210ENST00000539599 CRTAPO75718 401 aaPredicted RBP12.42□□□□□ -0.42
UBE3B-210ENST00000539599 CD37P11049 281 aa12.42□□□□□ -0.42
UBE3B-210ENST00000539599 C4BPBP20851 252 aa12.42□□□□□ -0.42
UBE3B-210ENST00000539599 CDCP2Q5VXM1 449 aa12.42□□□□□ -0.42
UBE3B-210ENST00000539599 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.42□□□□□ -0.42
UBE3B-210ENST00000539599 PDZD9Q8IXQ8 264 aa12.42□□□□□ -0.42
UBE3B-210ENST00000539599 NKAIN3Q8N8D7 197 aa12.42□□□□□ -0.42
UBE3B-210ENST00000539599 BVESQ8NE79 360 aa12.42□□□□□ -0.42
UBE3B-210ENST00000539599 OR2M3Q8NG83 312 aa12.42□□□□□ -0.42
UBE3B-210ENST00000539599 OR5D14Q8NGL3 314 aa12.42□□□□□ -0.42
UBE3B-210ENST00000539599 OR10R2Q8NGX6 335 aa12.42□□□□□ -0.42
UBE3B-210ENST00000539599 OR2AJ1Q8NGZ0 328 aa12.42□□□□□ -0.42
UBE3B-210ENST00000539599 THRSPQ92748 146 aa12.42□□□□□ -0.42
UBE3B-210ENST00000539599 C1orf147Q96MC9 270 aaPredicted RBP12.42□□□□□ -0.42
UBE3B-210ENST00000539599 ZNF416Q9BWM5 594 aa12.42□□□□□ -0.42
UBE3B-210ENST00000539599 TGIF2Q9GZN2 237 aa12.42□□□□□ -0.42
UBE3B-210ENST00000539599 PNRC2Q9NPJ4 139 aaKnown RBP12.42□□□□□ -0.42
UBE3B-210ENST00000539599 WDPCPO95876 746 aa12.41□□□□□ -0.42
UBE3B-210ENST00000539599 GABREP78334 506 aa12.41□□□□□ -0.42
UBE3B-210ENST00000539599 C11orf87Q6NUJ2 197 aa12.41□□□□□ -0.42
UBE3B-210ENST00000539599 LYG2Q86SG7 212 aa12.41□□□□□ -0.42
UBE3B-210ENST00000539599 MISPQ8IVT2 679 aa12.41□□□□□ -0.42
UBE3B-210ENST00000539599 ARMC10Q8N2F6 343 aa12.41□□□□□ -0.42
UBE3B-210ENST00000539599 OR6K3Q8NGY3 331 aa12.41□□□□□ -0.42
UBE3B-210ENST00000539599 NUBPLQ8TB37 319 aa12.41□□□□□ -0.42
UBE3B-210ENST00000539599 ZNF385AQ96PM9 386 aaKnown RBP12.41□□□□□ -0.42
UBE3B-210ENST00000539599 ST6GALNAC5Q9BVH7 336 aa12.41□□□□□ -0.42
UBE3B-210ENST00000539599 ALX4Q9H161 411 aaPredicted RBP12.41□□□□□ -0.42
UBE3B-210ENST00000539599 IGLV3-12A0A075B6K2 115 aa12.41□□□□□ -0.42
UBE3B-210ENST00000539599 C5orf51A6NDU8 294 aa12.41□□□□□ -0.42
UBE3B-210ENST00000539599 ZNF208O43345 1280 aa12.41□□□□□ -0.42
UBE3B-210ENST00000539599 HPP00738 406 aa12.41□□□□□ -0.42
UBE3B-210ENST00000539599 PLATP00750 562 aa12.41□□□□□ -0.42
UBE3B-210ENST00000539599 IGHG1P01857 330 aa12.41□□□□□ -0.42
UBE3B-210ENST00000539599 PNLIPP16233 465 aa12.41□□□□□ -0.42
UBE3B-210ENST00000539599 ZNF43P17038 809 aa12.41□□□□□ -0.42
UBE3B-210ENST00000539599 SLC6A9P48067 706 aa12.41□□□□□ -0.42
UBE3B-210ENST00000539599 SLC25A42Q86VD7 318 aa12.41□□□□□ -0.42
UBE3B-210ENST00000539599 TMEM200AQ86VY9 491 aa12.41□□□□□ -0.42
UBE3B-210ENST00000539599 OR4K15Q8NH41 348 aa12.41□□□□□ -0.42
UBE3B-210ENST00000539599 DNASE2BQ8WZ79 361 aa12.41□□□□□ -0.42
UBE3B-210ENST00000539599 MRPS24Q96EL2 167 aaKnown RBP12.41□□□□□ -0.42
UBE3B-210ENST00000539599 DEFB126Q9BYW3 111 aa12.41□□□□□ -0.42
UBE3B-210ENST00000539599 SDHAF3Q9NRP4 125 aa12.41□□□□□ -0.42
UBE3B-210ENST00000539599 RARRES3Q9UL19 164 aa12.41□□□□□ -0.42
UBE3B-210ENST00000539599 SRPK3Q9UPE1 567 aa12.41□□□□□ -0.42
UBE3B-210ENST00000539599 A8MXK9 166 aa12.41□□□□□ -0.42
UBE3B-210ENST00000539599 ZNF878C9JN71 531 aa12.41□□□□□ -0.42
UBE3B-210ENST00000539599 EFSO43281 561 aa12.41□□□□□ -0.42
UBE3B-210ENST00000539599 CASRP41180 1078 aa12.41□□□□□ -0.42
UBE3B-210ENST00000539599 MPPED2Q15777 294 aa12.41□□□□□ -0.42
UBE3B-210ENST00000539599 SLC51BQ86UW2 128 aa12.41□□□□□ -0.42
UBE3B-210ENST00000539599 OR4K17Q8NGC6 315 aa12.41□□□□□ -0.42
UBE3B-210ENST00000539599 LYZL4Q96KX0 146 aa12.41□□□□□ -0.42
UBE3B-210ENST00000539599 TNFSF18Q9UNG2 199 aa12.41□□□□□ -0.42
UBE3B-210ENST00000539599 LHX6Q9UPM6 363 aa12.41□□□□□ -0.42
UBE3B-210ENST00000539599 FAM186AA6NE01 2351 aa12.4□□□□□ -0.42
UBE3B-210ENST00000539599 TMEM14DPA8MWL7 114 aa12.4□□□□□ -0.42
UBE3B-210ENST00000539599 K7ESF4 209 aa12.4□□□□□ -0.42
UBE3B-210ENST00000539599 SULT2B1O00204 365 aa12.4□□□□□ -0.42
UBE3B-210ENST00000539599 TPPPO94811 219 aa12.4□□□□□ -0.42
UBE3B-210ENST00000539599 IFNA6P05013 189 aa12.4□□□□□ -0.42
UBE3B-210ENST00000539599 FGF2P09038 288 aa12.4□□□□□ -0.42
UBE3B-210ENST00000539599 FAHP16930 419 aa12.4□□□□□ -0.42
UBE3B-210ENST00000539599 M6PRP20645 277 aa12.4□□□□□ -0.42
UBE3B-210ENST00000539599 SERPINF1P36955 418 aa12.4□□□□□ -0.42
UBE3B-210ENST00000539599 TOMM20Q15388 145 aa12.4□□□□□ -0.42
UBE3B-210ENST00000539599 ZNF385CQ66K41 422 aaPredicted RBP12.4□□□□□ -0.42
UBE3B-210ENST00000539599 PIGTQ969N2 578 aa12.4□□□□□ -0.42
UBE3B-210ENST00000539599 NARS2Q96I59 477 aaKnown RBP12.4□□□□□ -0.42
UBE3B-210ENST00000539599 CDC14BO60729 498 aa12.4□□□□□ -0.43
UBE3B-210ENST00000539599 ZFAND5O76080 213 aa12.4□□□□□ -0.43
UBE3B-210ENST00000539599 F10P00742 488 aa12.4□□□□□ -0.43
UBE3B-210ENST00000539599 THEM4Q5T1C6 240 aa12.4□□□□□ -0.43
UBE3B-210ENST00000539599 RABEPKQ7Z6M1 372 aa12.4□□□□□ -0.43
UBE3B-210ENST00000539599 BATF2Q8N1L9 274 aa12.4□□□□□ -0.43
UBE3B-210ENST00000539599 MRGPRX4Q96LA9 322 aa12.4□□□□□ -0.43
UBE3B-210ENST00000539599 ELL3Q9HB65 397 aaPredicted RBP12.4□□□□□ -0.43
UBE3B-210ENST00000539599 PATE3B3GLJ2 98 aa12.39□□□□□ -0.43
UBE3B-210ENST00000539599 CDK2AP1O14519 115 aa12.39□□□□□ -0.43
UBE3B-210ENST00000539599 BPNT1O95861 308 aa12.39□□□□□ -0.43
UBE3B-210ENST00000539599 CD8AP01732 235 aa12.39□□□□□ -0.43
UBE3B-210ENST00000539599 PATE4P0C8F1 98 aa12.39□□□□□ -0.43
UBE3B-210ENST00000539599 CCL3P10147 92 aa12.39□□□□□ -0.43
UBE3B-210ENST00000539599 PGAM2P15259 253 aa12.39□□□□□ -0.43
UBE3B-210ENST00000539599 SERPINA2P20848 420 aa12.39□□□□□ -0.43
UBE3B-210ENST00000539599 SSBP1Q04837 148 aaKnown RBP12.39□□□□□ -0.43
UBE3B-210ENST00000539599 DEGS2Q6QHC5 323 aa12.39□□□□□ -0.43
UBE3B-210ENST00000539599 C5orf46Q6UWT4 87 aa12.39□□□□□ -0.43
UBE3B-210ENST00000539599 OR2W3Q7Z3T1 314 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms