RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 OR51V1Q9H2C8 321 aa9.71□□□□□ -0.86
RTN3-209ENST00000538995 NTN4Q9HB63 628 aa9.71□□□□□ -0.86
RTN3-209ENST00000538995 PAPOLBQ9NRJ5 636 aaKnown RBP9.71□□□□□ -0.86
RTN3-209ENST00000538995 KIF17Q9P2E2 1029 aa9.71□□□□□ -0.86
RTN3-209ENST00000538995 LOC105371242A0A075B767 164 aa9.7□□□□□ -0.86
RTN3-209ENST00000538995 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.7□□□□□ -0.86
RTN3-209ENST00000538995 AVPP01185 164 aa9.7□□□□□ -0.86
RTN3-209ENST00000538995 LYNP07948 512 aa9.7□□□□□ -0.86
RTN3-209ENST00000538995 SLC2A1P11166 492 aa9.7□□□□□ -0.86
RTN3-209ENST00000538995 EPHA1P21709 976 aa9.7□□□□□ -0.86
RTN3-209ENST00000538995 PRKACGP22612 351 aa9.7□□□□□ -0.86
RTN3-209ENST00000538995 CA6P23280 308 aa9.7□□□□□ -0.86
RTN3-209ENST00000538995 ZFP36P26651 326 aaKnown RBP9.7□□□□□ -0.86
RTN3-209ENST00000538995 PRSS12P56730 875 aa9.7□□□□□ -0.86
RTN3-209ENST00000538995 HNRNPA0Q13151 305 aaKnown RBP9.7□□□□□ -0.86
RTN3-209ENST00000538995 ATP6AP1Q15904 470 aa9.7□□□□□ -0.86
RTN3-209ENST00000538995 SNCBQ16143 134 aa9.7□□□□□ -0.86
RTN3-209ENST00000538995 ZNF404Q494X3 552 aa9.7□□□□□ -0.86
RTN3-209ENST00000538995 ZNF771Q7L3S4 317 aaPredicted RBP9.7□□□□□ -0.86
RTN3-209ENST00000538995 OR56B2PQ8NGI1 322 aa9.7□□□□□ -0.86
RTN3-209ENST00000538995 OR5K1Q8NHB7 308 aa9.7□□□□□ -0.86
RTN3-209ENST00000538995 ZNF420Q8TAQ5 688 aaPredicted RBP9.7□□□□□ -0.86
RTN3-209ENST00000538995 NANPQ8TBE9 248 aa9.7□□□□□ -0.86
RTN3-209ENST00000538995 ZNF418Q8TF45 676 aaPredicted RBP9.7□□□□□ -0.86
RTN3-209ENST00000538995 ZFAND2BQ8WV99 257 aa9.7□□□□□ -0.86
RTN3-209ENST00000538995 ZMYND19Q96E35 227 aaPredicted RBP9.7□□□□□ -0.86
RTN3-209ENST00000538995 C19orf24Q9BVV8 132 aa9.7□□□□□ -0.86
RTN3-209ENST00000538995 RGCCQ9H4X1 137 aa9.7□□□□□ -0.86
RTN3-209ENST00000538995 C7orf69Q9H7B7 122 aa9.7□□□□□ -0.86
RTN3-209ENST00000538995 NIPAL2Q9H841 368 aa9.7□□□□□ -0.86
RTN3-209ENST00000538995 FN3KRPQ9HA64 309 aa9.7□□□□□ -0.86
RTN3-209ENST00000538995 TMEM165Q9HC07 324 aa9.7□□□□□ -0.86
RTN3-209ENST00000538995 MIOXQ9UGB7 285 aa9.7□□□□□ -0.86
RTN3-209ENST00000538995 OR5V1Q9UGF6 321 aa9.7□□□□□ -0.86
RTN3-209ENST00000538995 C5orf63A6NC05 138 aa9.69□□□□□ -0.86
RTN3-209ENST00000538995 FAM20BO75063 409 aa9.69□□□□□ -0.86
RTN3-209ENST00000538995 TIPRLO75663 272 aa9.69□□□□□ -0.86
RTN3-209ENST00000538995 DYSFO75923 2080 aa9.69□□□□□ -0.86
RTN3-209ENST00000538995 CYB5R3P00387 301 aaPredicted RBP9.69□□□□□ -0.86
RTN3-209ENST00000538995 FSHBP01225 129 aa9.69□□□□□ -0.86
RTN3-209ENST00000538995 ANXA2P07355 339 aaKnown RBP9.69□□□□□ -0.86
RTN3-209ENST00000538995 WNT2P09544 360 aa9.69□□□□□ -0.86
RTN3-209ENST00000538995 H2BFMP0C1H6 154 aa9.69□□□□□ -0.86
RTN3-209ENST00000538995 FCGR1AP12314 374 aa9.69□□□□□ -0.86
RTN3-209ENST00000538995 RPS2P15880 293 aaKnown RBP9.69□□□□□ -0.86
RTN3-209ENST00000538995 ZNF12P17014 697 aa9.69□□□□□ -0.86
RTN3-209ENST00000538995 SLC2A5P22732 501 aa9.69□□□□□ -0.86
RTN3-209ENST00000538995 ANOS1P23352 680 aa9.69□□□□□ -0.86
RTN3-209ENST00000538995 PMELP40967 661 aa9.69□□□□□ -0.86
RTN3-209ENST00000538995 CRISP1P54107 249 aa9.69□□□□□ -0.86
RTN3-209ENST00000538995 ZNF121P58317 390 aaPredicted RBP9.69□□□□□ -0.86
RTN3-209ENST00000538995 ESRRGP62508 458 aa9.69□□□□□ -0.86
RTN3-209ENST00000538995 KCNJ8Q15842 424 aa9.69□□□□□ -0.86
RTN3-209ENST00000538995 TIGD6Q17RP2 521 aa9.69□□□□□ -0.86
RTN3-209ENST00000538995 KLHL12Q53G59 568 aa9.69□□□□□ -0.86
RTN3-209ENST00000538995 DCDC5Q6ZRR9 648 aa9.69□□□□□ -0.86
RTN3-209ENST00000538995 SPATC1Q76KD6 591 aa9.69□□□□□ -0.86
RTN3-209ENST00000538995 NLRC3Q7RTR2 1065 aa9.69□□□□□ -0.86
RTN3-209ENST00000538995 PRSS45Q7RTY3 260 aa9.69□□□□□ -0.86
RTN3-209ENST00000538995 CPOQ8IVL8 374 aa9.69□□□□□ -0.86
RTN3-209ENST00000538995 DEFB108BQ8NET1 73 aa9.69□□□□□ -0.86
RTN3-209ENST00000538995 SEMA6DQ8NFY4 1073 aa9.69□□□□□ -0.86
RTN3-209ENST00000538995 DUS3LQ96G46 650 aaKnown RBP9.69□□□□□ -0.86
RTN3-209ENST00000538995 REEP6Q96HR9 211 aa9.69□□□□□ -0.86
RTN3-209ENST00000538995 SSBP3Q9BWW4 388 aaPredicted RBP9.69□□□□□ -0.86
RTN3-209ENST00000538995 OR10A2Q9H208 303 aa9.69□□□□□ -0.86
RTN3-209ENST00000538995 OCEL1Q9H607 264 aa9.69□□□□□ -0.86
RTN3-209ENST00000538995 TRIM36Q9NQ86 728 aa9.69□□□□□ -0.86
RTN3-209ENST00000538995 C14orf119Q9NWQ9 140 aa9.69□□□□□ -0.86
RTN3-209ENST00000538995 OPN4Q9UHM6 478 aa9.69□□□□□ -0.86
RTN3-209ENST00000538995 ENOPH1Q9UHY7 261 aa9.69□□□□□ -0.86
RTN3-209ENST00000538995 ZNF391Q9UJN7 358 aa9.69□□□□□ -0.86
RTN3-209ENST00000538995 PPIAL4AQ9Y536 164 aa9.69□□□□□ -0.86
RTN3-209ENST00000538995 IGHV3-64DA0A0J9YX35 117 aa9.68□□□□□ -0.86
RTN3-209ENST00000538995 hCG_38984A0A1B0GV85 526 aa9.68□□□□□ -0.86
RTN3-209ENST00000538995 ANKRD30BLA7E2S9 258 aa9.68□□□□□ -0.86
RTN3-209ENST00000538995 TBX1O43435 398 aa9.68□□□□□ -0.86
RTN3-209ENST00000538995 SELENOFO60613 162 aa9.68□□□□□ -0.86
RTN3-209ENST00000538995 PPIAL4GP0DN37 164 aa9.68□□□□□ -0.86
RTN3-209ENST00000538995 ADRA2CP18825 462 aa9.68□□□□□ -0.86
RTN3-209ENST00000538995 FASP25445 335 aa9.68□□□□□ -0.86
RTN3-209ENST00000538995 DAPP51397 102 aa9.68□□□□□ -0.86
RTN3-209ENST00000538995 PSMA6P60900 246 aaKnown RBP9.68□□□□□ -0.86
RTN3-209ENST00000538995 SEC61A1P61619 476 aaKnown RBP9.68□□□□□ -0.86
RTN3-209ENST00000538995 RPS7P62081 194 aaKnown RBP9.68□□□□□ -0.86
RTN3-209ENST00000538995 FAM3AP98173 230 aa9.68□□□□□ -0.86
RTN3-209ENST00000538995 ZNF154Q13106 437 aa9.68□□□□□ -0.86
RTN3-209ENST00000538995 SNAPC1Q16533 368 aa9.68□□□□□ -0.86
RTN3-209ENST00000538995 LCN1P1Q5VSP4 162 aa9.68□□□□□ -0.86
RTN3-209ENST00000538995 C1orf146Q5VVC0 180 aa9.68□□□□□ -0.86
RTN3-209ENST00000538995 PRAMEF6Q5VXH4 476 aa9.68□□□□□ -0.86
RTN3-209ENST00000538995 FAM57BQ71RH2 274 aa9.68□□□□□ -0.86
RTN3-209ENST00000538995 SLC16A9Q7RTY1 509 aa9.68□□□□□ -0.86
RTN3-209ENST00000538995 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.68□□□□□ -0.86
RTN3-209ENST00000538995 FTMTQ8N4E7 242 aa9.68□□□□□ -0.86
RTN3-209ENST00000538995 CSNK2A3Q8NEV1 391 aa9.68□□□□□ -0.86
RTN3-209ENST00000538995 OR8B3Q8NGG8 313 aa9.68□□□□□ -0.86
RTN3-209ENST00000538995 ITFG2Q969R8 447 aa9.68□□□□□ -0.86
RTN3-209ENST00000538995 NEIL1Q96FI4 390 aaPredicted RBP9.68□□□□□ -0.86
RTN3-209ENST00000538995 OR8B2Q96RD0 313 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms