RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 ZNF154Q13106 437 aa12.53□□□□□ -0.4
RAB40B-202ENST00000538809 MPPED2Q15777 294 aa12.53□□□□□ -0.4
RAB40B-202ENST00000538809 ZNF181Q2M3W8 571 aa12.53□□□□□ -0.4
RAB40B-202ENST00000538809 ARMCX4Q5H9R4 360 aa12.53□□□□□ -0.4
RAB40B-202ENST00000538809 PRSS45Q7RTY3 260 aa12.53□□□□□ -0.4
RAB40B-202ENST00000538809 KLBQ86Z14 1044 aa12.53□□□□□ -0.4
RAB40B-202ENST00000538809 C1orf87Q8N0U7 546 aa12.53□□□□□ -0.4
RAB40B-202ENST00000538809 BPIFB2Q8N4F0 458 aa12.53□□□□□ -0.4
RAB40B-202ENST00000538809 DNAJC9Q8WXX5 260 aa12.53□□□□□ -0.4
RAB40B-202ENST00000538809 DUS3LQ96G46 650 aaKnown RBP12.53□□□□□ -0.4
RAB40B-202ENST00000538809 INTS14Q96SY0 518 aa12.53□□□□□ -0.4
RAB40B-202ENST00000538809 AMELYQ99218 206 aa12.53□□□□□ -0.4
RAB40B-202ENST00000538809 ABHD6Q9BV23 337 aa12.53□□□□□ -0.4
RAB40B-202ENST00000538809 SSBP3Q9BWW4 388 aaPredicted RBP12.53□□□□□ -0.4
RAB40B-202ENST00000538809 MMADHCQ9H3L0 296 aaPredicted RBP12.53□□□□□ -0.4
RAB40B-202ENST00000538809 ZNF556Q9HAH1 456 aa12.53□□□□□ -0.4
RAB40B-202ENST00000538809 LRCH1Q9Y2L9 728 aa12.53□□□□□ -0.4
RAB40B-202ENST00000538809 POLR3KQ9Y2Y1 108 aaPredicted RBP12.53□□□□□ -0.4
RAB40B-202ENST00000538809 INSIG2Q9Y5U4 225 aa12.53□□□□□ -0.4
RAB40B-202ENST00000538809 PRR23D1E9PI22 279 aaPredicted RBP12.52□□□□□ -0.41
RAB40B-202ENST00000538809 PRODHO43272 600 aa12.52□□□□□ -0.41
RAB40B-202ENST00000538809 ATP5HO75947 161 aa12.52□□□□□ -0.41
RAB40B-202ENST00000538809 HMGN1P05114 100 aa12.52□□□□□ -0.41
RAB40B-202ENST00000538809 WNT2P09544 360 aa12.52□□□□□ -0.41
RAB40B-202ENST00000538809 PRR23D2P0DMB1 279 aaPredicted RBP12.52□□□□□ -0.41
RAB40B-202ENST00000538809 IRF2P14316 349 aa12.52□□□□□ -0.41
RAB40B-202ENST00000538809 CX3CR1P49238 355 aa12.52□□□□□ -0.41
RAB40B-202ENST00000538809 RASSF2P50749 326 aa12.52□□□□□ -0.41
RAB40B-202ENST00000538809 DAPP51397 102 aa12.52□□□□□ -0.41
RAB40B-202ENST00000538809 GNB2P62879 340 aa12.52□□□□□ -0.41
RAB40B-202ENST00000538809 ACTG1P63261 375 aa12.52□□□□□ -0.41
RAB40B-202ENST00000538809 ATP6AP1Q15904 470 aa12.52□□□□□ -0.41
RAB40B-202ENST00000538809 ZNF404Q494X3 552 aa12.52□□□□□ -0.41
RAB40B-202ENST00000538809 TMEM236Q5W0B7 351 aa12.52□□□□□ -0.41
RAB40B-202ENST00000538809 PLBD1Q6P4A8 553 aa12.52□□□□□ -0.41
RAB40B-202ENST00000538809 RHOUQ7L0Q8 258 aa12.52□□□□□ -0.41
RAB40B-202ENST00000538809 PARP8Q8N3A8 854 aa12.52□□□□□ -0.41
RAB40B-202ENST00000538809 CELF2-AS1Q8N7Q2 184 aa12.52□□□□□ -0.41
RAB40B-202ENST00000538809 OR56B2PQ8NGI1 322 aa12.52□□□□□ -0.41
RAB40B-202ENST00000538809 OR11L1Q8NGX0 322 aa12.52□□□□□ -0.41
RAB40B-202ENST00000538809 SPSB4Q96A44 273 aa12.52□□□□□ -0.41
RAB40B-202ENST00000538809 ZMYND19Q96E35 227 aaPredicted RBP12.52□□□□□ -0.41
RAB40B-202ENST00000538809 NEIL1Q96FI4 390 aaPredicted RBP12.52□□□□□ -0.41
RAB40B-202ENST00000538809 SUCNR1Q9BXA5 334 aa12.52□□□□□ -0.41
RAB40B-202ENST00000538809 OR51V1Q9H2C8 321 aa12.52□□□□□ -0.41
RAB40B-202ENST00000538809 ESM1Q9NQ30 184 aa12.52□□□□□ -0.41
RAB40B-202ENST00000538809 DNAJC27Q9NZQ0 273 aa12.52□□□□□ -0.41
RAB40B-202ENST00000538809 PPIAL4AQ9Y536 164 aa12.52□□□□□ -0.41
RAB40B-202ENST00000538809 AUP1Q9Y679 476 aa12.52□□□□□ -0.41
RAB40B-202ENST00000538809 TENM1Q9UKZ4 2725 aa12.51□□□□□ -0.41
RAB40B-202ENST00000538809 FSTL3O95633 263 aa12.51□□□□□ -0.41
RAB40B-202ENST00000538809 PTBP3O95758 552 aaKnown RBP12.51□□□□□ -0.41
RAB40B-202ENST00000538809 ANXA2P07355 339 aaKnown RBP12.51□□□□□ -0.41
RAB40B-202ENST00000538809 PAICSP22234 425 aaKnown RBP12.51□□□□□ -0.41
RAB40B-202ENST00000538809 HSD11B1P28845 292 aa12.51□□□□□ -0.41
RAB40B-202ENST00000538809 CD80P33681 288 aa12.51□□□□□ -0.41
RAB40B-202ENST00000538809 OPRL1P41146 370 aa12.51□□□□□ -0.41
RAB40B-202ENST00000538809 CRISP1P54107 249 aa12.51□□□□□ -0.41
RAB40B-202ENST00000538809 GRB2P62993 217 aaKnown RBP12.51□□□□□ -0.41
RAB40B-202ENST00000538809 KLF17Q5JT82 389 aaPredicted RBP12.51□□□□□ -0.41
RAB40B-202ENST00000538809 LYPD2Q6UXB3 125 aa12.51□□□□□ -0.41
RAB40B-202ENST00000538809 USP43Q70EL4 1123 aa12.51□□□□□ -0.41
RAB40B-202ENST00000538809 SHFQ7M4L6 423 aa12.51□□□□□ -0.41
RAB40B-202ENST00000538809 CPOQ8IVL8 374 aa12.51□□□□□ -0.41
RAB40B-202ENST00000538809 BOLLQ8N9W6 283 aaKnown RBP12.51□□□□□ -0.41
RAB40B-202ENST00000538809 BBS1Q8NFJ9 593 aa12.51□□□□□ -0.41
RAB40B-202ENST00000538809 OR8B3Q8NGG8 313 aa12.51□□□□□ -0.41
RAB40B-202ENST00000538809 OR5K1Q8NHB7 308 aa12.51□□□□□ -0.41
RAB40B-202ENST00000538809 Q8TCH9 128 aa12.51□□□□□ -0.41
RAB40B-202ENST00000538809 OR8B2Q96RD0 313 aa12.51□□□□□ -0.41
RAB40B-202ENST00000538809 MRI1Q9BV20 369 aa12.51□□□□□ -0.41
RAB40B-202ENST00000538809 TOR3AQ9H497 397 aa12.51□□□□□ -0.41
RAB40B-202ENST00000538809 PAPOLBQ9NRJ5 636 aaKnown RBP12.51□□□□□ -0.41
RAB40B-202ENST00000538809 MIOXQ9UGB7 285 aa12.51□□□□□ -0.41
RAB40B-202ENST00000538809 IGHV3OR16-10A0A075B7F0 116 aa12.5□□□□□ -0.41
RAB40B-202ENST00000538809 TRIM77I1YAP6 450 aa12.5□□□□□ -0.41
RAB40B-202ENST00000538809 XRCC2O43543 280 aa12.5□□□□□ -0.41
RAB40B-202ENST00000538809 SELENOFO60613 162 aa12.5□□□□□ -0.41
RAB40B-202ENST00000538809 PITPNBP48739 271 aa12.5□□□□□ -0.41
RAB40B-202ENST00000538809 TIGD6Q17RP2 521 aa12.5□□□□□ -0.41
RAB40B-202ENST00000538809 GFOD2Q3B7J2 385 aa12.5□□□□□ -0.41
RAB40B-202ENST00000538809 SLC35D3Q5M8T2 416 aa12.5□□□□□ -0.41
RAB40B-202ENST00000538809 C12orf54Q6X4T0 127 aa12.5□□□□□ -0.41
RAB40B-202ENST00000538809 FAM57BQ71RH2 274 aa12.5□□□□□ -0.41
RAB40B-202ENST00000538809 OTOSQ8NHW6 89 aa12.5□□□□□ -0.41
RAB40B-202ENST00000538809 ZFAND2BQ8WV99 257 aa12.5□□□□□ -0.41
RAB40B-202ENST00000538809 SLC22A4Q9H015 551 aa12.5□□□□□ -0.41
RAB40B-202ENST00000538809 GABARAPL1Q9H0R8 117 aa12.5□□□□□ -0.41
RAB40B-202ENST00000538809 OPA3Q9H6K4 179 aa12.5□□□□□ -0.41
RAB40B-202ENST00000538809 FN3KRPQ9HA64 309 aa12.5□□□□□ -0.41
RAB40B-202ENST00000538809 BRD7Q9NPI1 651 aa12.5□□□□□ -0.41
RAB40B-202ENST00000538809 MRPL15Q9P015 296 aaKnown RBP12.5□□□□□ -0.41
RAB40B-202ENST00000538809 ZNF69Q9UC07 566 aa12.5□□□□□ -0.41
RAB40B-202ENST00000538809 NOP16Q9Y3C1 178 aaKnown RBP12.5□□□□□ -0.41
RAB40B-202ENST00000538809 IGHV2-70DA0A0C4DH43 119 aa12.49□□□□□ -0.41
RAB40B-202ENST00000538809 CCDC182A6NF36 153 aa12.49□□□□□ -0.41
RAB40B-202ENST00000538809 A6NLC8 198 aa12.49□□□□□ -0.41
RAB40B-202ENST00000538809 GMDSO60547 372 aa12.49□□□□□ -0.41
RAB40B-202ENST00000538809 GRPP07492 148 aa12.49□□□□□ -0.41
RAB40B-202ENST00000538809 NAA10P41227 235 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 204.3 ms