RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 MTNR1AP48039 350 aa13.51□□□□□ -0.25
CLSTN3-204ENST00000535313 GRB2P62993 217 aaKnown RBP13.51□□□□□ -0.25
CLSTN3-204ENST00000535313 MZT1Q08AG7 82 aa13.51□□□□□ -0.25
CLSTN3-204ENST00000535313 FOXL1Q12952 345 aa13.51□□□□□ -0.25
CLSTN3-204ENST00000535313 TUSC1Q2TAM9 212 aa13.51□□□□□ -0.25
CLSTN3-204ENST00000535313 AWAT1Q58HT5 328 aa13.51□□□□□ -0.25
CLSTN3-204ENST00000535313 TEX30Q5JUR7 227 aa13.51□□□□□ -0.25
CLSTN3-204ENST00000535313 BOLLQ8N9W6 283 aaKnown RBP13.51□□□□□ -0.25
CLSTN3-204ENST00000535313 SPERTQ8NA61 448 aa13.51□□□□□ -0.25
CLSTN3-204ENST00000535313 C19orf18Q8NEA5 215 aa13.51□□□□□ -0.25
CLSTN3-204ENST00000535313 OR10G2Q8NGC3 310 aa13.51□□□□□ -0.25
CLSTN3-204ENST00000535313 UPRTQ96BW1 309 aa13.51□□□□□ -0.25
CLSTN3-204ENST00000535313 DUX5Q96PT3 197 aa13.51□□□□□ -0.25
CLSTN3-204ENST00000535313 NUDT16L1Q9BRJ7 211 aaKnown RBP13.51□□□□□ -0.25
CLSTN3-204ENST00000535313 NMNAT2Q9BZQ4 307 aa13.51□□□□□ -0.25
CLSTN3-204ENST00000535313 MMADHCQ9H3L0 296 aaPredicted RBP13.51□□□□□ -0.25
CLSTN3-204ENST00000535313 VNN3Q9NY84 501 aa13.51□□□□□ -0.25
CLSTN3-204ENST00000535313 IGHV3OR16-10A0A075B7F0 116 aa13.5□□□□□ -0.25
CLSTN3-204ENST00000535313 XRCC2O43543 280 aa13.5□□□□□ -0.25
CLSTN3-204ENST00000535313 IGHV4-38-2P0DP08 117 aa13.5□□□□□ -0.25
CLSTN3-204ENST00000535313 HKR1P10072 659 aa13.5□□□□□ -0.25
CLSTN3-204ENST00000535313 RAP2AP10114 183 aa13.5□□□□□ -0.25
CLSTN3-204ENST00000535313 CLUP10909 449 aa13.5□□□□□ -0.25
CLSTN3-204ENST00000535313 SLC2A1P11166 492 aa13.5□□□□□ -0.25
CLSTN3-204ENST00000535313 NPY4RP50391 375 aa13.5□□□□□ -0.25
CLSTN3-204ENST00000535313 MS4A2Q01362 244 aa13.5□□□□□ -0.25
CLSTN3-204ENST00000535313 GK3PQ14409 553 aa13.5□□□□□ -0.25
CLSTN3-204ENST00000535313 OR8B8Q15620 311 aa13.5□□□□□ -0.25
CLSTN3-204ENST00000535313 WDR25Q64LD2 544 aaPredicted RBP13.5□□□□□ -0.25
CLSTN3-204ENST00000535313 LYPD2Q6UXB3 125 aa13.5□□□□□ -0.25
CLSTN3-204ENST00000535313 SPATC1Q76KD6 591 aa13.5□□□□□ -0.25
CLSTN3-204ENST00000535313 OR56B2PQ8NGI1 322 aa13.5□□□□□ -0.25
CLSTN3-204ENST00000535313 SGMS2Q8NHU3 365 aa13.5□□□□□ -0.25
CLSTN3-204ENST00000535313 TEX47Q8TBZ9 253 aa13.5□□□□□ -0.25
CLSTN3-204ENST00000535313 TOR3AQ9H497 397 aa13.5□□□□□ -0.25
CLSTN3-204ENST00000535313 SP140LQ9H930 580 aa13.5□□□□□ -0.25
CLSTN3-204ENST00000535313 TRIM36Q9NQ86 728 aa13.5□□□□□ -0.25
CLSTN3-204ENST00000535313 CMC2Q9NRP2 79 aa13.5□□□□□ -0.25
CLSTN3-204ENST00000535313 ERVK-18Q9QC07 812 aa13.5□□□□□ -0.25
CLSTN3-204ENST00000535313 PRPF19Q9UMS4 504 aaKnown RBP13.5□□□□□ -0.25
CLSTN3-204ENST00000535313 TRAV40A0A0B4J280 105 aa13.49□□□□□ -0.25
CLSTN3-204ENST00000535313 DHRS12A0PJE2 317 aa13.49□□□□□ -0.25
CLSTN3-204ENST00000535313 C5orf63A6NC05 138 aa13.49□□□□□ -0.25
CLSTN3-204ENST00000535313 A6NLC8 198 aa13.49□□□□□ -0.25
CLSTN3-204ENST00000535313 ANKRD30BLA7E2S9 258 aa13.49□□□□□ -0.25
CLSTN3-204ENST00000535313 H3BN98 237 aa13.49□□□□□ -0.25
CLSTN3-204ENST00000535313 LGALS8O00214 317 aa13.49□□□□□ -0.25
CLSTN3-204ENST00000535313 TBX1O43435 398 aa13.49□□□□□ -0.25
CLSTN3-204ENST00000535313 ENSAO43768 121 aaKnown RBP13.49□□□□□ -0.25
CLSTN3-204ENST00000535313 PTBP3O95758 552 aaKnown RBP13.49□□□□□ -0.25
CLSTN3-204ENST00000535313 ANXA2P07355 339 aaKnown RBP13.49□□□□□ -0.25
CLSTN3-204ENST00000535313 HSD11B1P28845 292 aa13.49□□□□□ -0.25
CLSTN3-204ENST00000535313 DDOSTP39656 456 aa13.49□□□□□ -0.25
CLSTN3-204ENST00000535313 CX3CR1P49238 355 aa13.49□□□□□ -0.25
CLSTN3-204ENST00000535313 EIF2B1Q14232 305 aaKnown RBP13.49□□□□□ -0.25
CLSTN3-204ENST00000535313 CD276Q5ZPR3 534 aa13.49□□□□□ -0.25
CLSTN3-204ENST00000535313 SFRP4Q6FHJ7 346 aaPredicted RBP13.49□□□□□ -0.25
CLSTN3-204ENST00000535313 CD300LDQ6UXZ3 194 aa13.49□□□□□ -0.25
CLSTN3-204ENST00000535313 C9orf139Q6ZV77 190 aa13.49□□□□□ -0.25
CLSTN3-204ENST00000535313 TRPM8Q7Z2W7 1104 aa13.49□□□□□ -0.25
CLSTN3-204ENST00000535313 GIPC3Q8TF64 312 aa13.49□□□□□ -0.25
CLSTN3-204ENST00000535313 SLC25A28Q96A46 364 aa13.49□□□□□ -0.25
CLSTN3-204ENST00000535313 DACT3Q96B18 629 aaPredicted RBP13.49□□□□□ -0.25
CLSTN3-204ENST00000535313 OTULINQ96BN8 352 aa13.49□□□□□ -0.25
CLSTN3-204ENST00000535313 CCDC124Q96CT7 223 aaKnown RBP13.49□□□□□ -0.25
CLSTN3-204ENST00000535313 ASB9Q96DX5 294 aa13.49□□□□□ -0.25
CLSTN3-204ENST00000535313 ZNF48Q96MX3 618 aaPredicted RBP13.49□□□□□ -0.25
CLSTN3-204ENST00000535313 TECTBQ96PL2 329 aa13.49□□□□□ -0.25
CLSTN3-204ENST00000535313 INTS14Q96SY0 518 aa13.49□□□□□ -0.25
CLSTN3-204ENST00000535313 NIPSNAP1Q9BPW8 284 aa13.49□□□□□ -0.25
CLSTN3-204ENST00000535313 C14orf119Q9NWQ9 140 aa13.49□□□□□ -0.25
CLSTN3-204ENST00000535313 C1orf123Q9NWV4 160 aa13.49□□□□□ -0.25
CLSTN3-204ENST00000535313 TRAV38-1A0A0B4J264 116 aa13.48□□□□□ -0.25
CLSTN3-204ENST00000535313 hCG_1807616A0A1W2PRN6 198 aa13.48□□□□□ -0.25
CLSTN3-204ENST00000535313 C3orf80F5H4A9 247 aa13.48□□□□□ -0.25
CLSTN3-204ENST00000535313 NDUFA2O43678 99 aa13.48□□□□□ -0.25
CLSTN3-204ENST00000535313 PLATP00750 562 aa13.48□□□□□ -0.25
CLSTN3-204ENST00000535313 APOC1P02654 83 aa13.48□□□□□ -0.25
CLSTN3-204ENST00000535313 GRPP07492 148 aa13.48□□□□□ -0.25
CLSTN3-204ENST00000535313 ANOS1P23352 680 aa13.48□□□□□ -0.25
CLSTN3-204ENST00000535313 GRK5P34947 590 aa13.48□□□□□ -0.25
CLSTN3-204ENST00000535313 PSMB10P40306 273 aa13.48□□□□□ -0.25
CLSTN3-204ENST00000535313 TIGD6Q17RP2 521 aa13.48□□□□□ -0.25
CLSTN3-204ENST00000535313 LINC01590Q5TEZ4 76 aa13.48□□□□□ -0.25
CLSTN3-204ENST00000535313 ZNF841Q6ZN19 808 aa13.48□□□□□ -0.25
CLSTN3-204ENST00000535313 ERI1Q8IV48 349 aaKnown RBP13.48□□□□□ -0.25
CLSTN3-204ENST00000535313 OR6N2Q8NGY6 317 aa13.48□□□□□ -0.25
CLSTN3-204ENST00000535313 OR8S1Q8NH09 359 aa13.48□□□□□ -0.25
CLSTN3-204ENST00000535313 SPSB4Q96A44 273 aa13.48□□□□□ -0.25
CLSTN3-204ENST00000535313 FEVQ99581 238 aa13.48□□□□□ -0.25
CLSTN3-204ENST00000535313 CHID1Q9BWS9 393 aa13.48□□□□□ -0.25
CLSTN3-204ENST00000535313 KIF17Q9P2E2 1029 aa13.48□□□□□ -0.25
CLSTN3-204ENST00000535313 OOEPA6NGQ2 149 aa13.47□□□□□ -0.25
CLSTN3-204ENST00000535313 FAM183AA6NL82 134 aa13.47□□□□□ -0.25
CLSTN3-204ENST00000535313 CLDN34H7C241 214 aa13.47□□□□□ -0.25
CLSTN3-204ENST00000535313 ADAM20O43506 726 aa13.47□□□□□ -0.25
CLSTN3-204ENST00000535313 CST1P01037 141 aa13.47□□□□□ -0.25
CLSTN3-204ENST00000535313 RNASE1P07998 156 aaKnown RBP13.47□□□□□ -0.25
CLSTN3-204ENST00000535313 PAICSP22234 425 aaKnown RBP13.47□□□□□ -0.25
CLSTN3-204ENST00000535313 CFL1P23528 166 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms