RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 NUP50Q9UKX7 468 aa19.63■□□□□ 0.73
SMPD1-209ENST00000533196 GLCEO94923 617 aa19.62■□□□□ 0.73
SMPD1-209ENST00000533196 CA6P23280 308 aa19.62■□□□□ 0.73
SMPD1-209ENST00000533196 GNB2P62879 340 aa19.62■□□□□ 0.73
SMPD1-209ENST00000533196 TUSC1Q2TAM9 212 aa19.62■□□□□ 0.73
SMPD1-209ENST00000533196 BTNL3Q6UXE8 466 aa19.62■□□□□ 0.73
SMPD1-209ENST00000533196 C12orf54Q6X4T0 127 aa19.62■□□□□ 0.73
SMPD1-209ENST00000533196 INTS14Q96SY0 518 aa19.62■□□□□ 0.73
SMPD1-209ENST00000533196 RNF7Q9UBF6 113 aa19.62■□□□□ 0.73
SMPD1-209ENST00000533196 IGHV3-64DA0A0J9YX35 117 aa19.61■□□□□ 0.73
SMPD1-209ENST00000533196 FAM20BO75063 409 aa19.61■□□□□ 0.73
SMPD1-209ENST00000533196 RGS9O75916 674 aaPredicted RBP19.61■□□□□ 0.73
SMPD1-209ENST00000533196 ZNF205O95201 554 aa19.61■□□□□ 0.73
SMPD1-209ENST00000533196 GSTT1P30711 240 aa19.61■□□□□ 0.73
SMPD1-209ENST00000533196 COMPP49747 757 aaPredicted RBP19.61■□□□□ 0.73
SMPD1-209ENST00000533196 PAX2Q02962 417 aa19.61■□□□□ 0.73
SMPD1-209ENST00000533196 EIF2B1Q14232 305 aaKnown RBP19.61■□□□□ 0.73
SMPD1-209ENST00000533196 KCNJ8Q15842 424 aa19.61■□□□□ 0.73
SMPD1-209ENST00000533196 RNF133Q8WVZ7 376 aa19.61■□□□□ 0.73
SMPD1-209ENST00000533196 RAB40AQ8WXH6 277 aa19.61■□□□□ 0.73
SMPD1-209ENST00000533196 TRIM36Q9NQ86 728 aa19.61■□□□□ 0.73
SMPD1-209ENST00000533196 PDP1Q9P0J1 537 aaPredicted RBP19.61■□□□□ 0.73
SMPD1-209ENST00000533196 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP19.6■□□□□ 0.73
SMPD1-209ENST00000533196 GYG2O15488 501 aa19.6■□□□□ 0.73
SMPD1-209ENST00000533196 HMGN1P05114 100 aa19.6■□□□□ 0.73
SMPD1-209ENST00000533196 HSD11B1P28845 292 aa19.6■□□□□ 0.73
SMPD1-209ENST00000533196 ACTG1P63261 375 aa19.6■□□□□ 0.73
SMPD1-209ENST00000533196 PRAMEF6Q5VXH4 476 aa19.6■□□□□ 0.73
SMPD1-209ENST00000533196 RBMS3Q6XE24 437 aaKnown RBP19.6■□□□□ 0.73
SMPD1-209ENST00000533196 DPY19L4Q7Z388 723 aa19.6■□□□□ 0.73
SMPD1-209ENST00000533196 ERI1Q8IV48 349 aaKnown RBP19.6■□□□□ 0.73
SMPD1-209ENST00000533196 OR6N2Q8NGY6 317 aa19.6■□□□□ 0.73
SMPD1-209ENST00000533196 DACT3Q96B18 629 aaPredicted RBP19.6■□□□□ 0.73
SMPD1-209ENST00000533196 ZNF556Q9HAH1 456 aa19.6■□□□□ 0.73
SMPD1-209ENST00000533196 C14orf119Q9NWQ9 140 aa19.6■□□□□ 0.73
SMPD1-209ENST00000533196 IGHV2-70DA0A0C4DH43 119 aa19.59■□□□□ 0.73
SMPD1-209ENST00000533196 TMEM89A2RUT3 159 aa19.59■□□□□ 0.73
SMPD1-209ENST00000533196 PHYHO14832 338 aa19.59■□□□□ 0.73
SMPD1-209ENST00000533196 E2F6O75461 281 aa19.59■□□□□ 0.73
SMPD1-209ENST00000533196 SLC2A1P11166 492 aa19.59■□□□□ 0.73
SMPD1-209ENST00000533196 OSMP13725 252 aa19.59■□□□□ 0.73
SMPD1-209ENST00000533196 ANXA8P13928 327 aa19.59■□□□□ 0.73
SMPD1-209ENST00000533196 CFL1P23528 166 aaKnown RBP19.59■□□□□ 0.73
SMPD1-209ENST00000533196 PITPNBP48739 271 aa19.59■□□□□ 0.73
SMPD1-209ENST00000533196 CX3CR1P49238 355 aa19.59■□□□□ 0.73
SMPD1-209ENST00000533196 NPY4RP50391 375 aa19.59■□□□□ 0.73
SMPD1-209ENST00000533196 FLOT2Q14254 428 aa19.59■□□□□ 0.73
SMPD1-209ENST00000533196 MPPED2Q15777 294 aa19.59■□□□□ 0.73
SMPD1-209ENST00000533196 FAM201AQ5SY85 155 aa19.59■□□□□ 0.73
SMPD1-209ENST00000533196 IQCF1Q8N6M8 205 aa19.59■□□□□ 0.73
SMPD1-209ENST00000533196 OR56B2PQ8NGI1 322 aa19.59■□□□□ 0.73
SMPD1-209ENST00000533196 OR52H1Q8NGJ2 320 aa19.59■□□□□ 0.73
SMPD1-209ENST00000533196 ABHD6Q9BV23 337 aa19.59■□□□□ 0.73
SMPD1-209ENST00000533196 UFSP2Q9NUQ7 469 aa19.59■□□□□ 0.73
SMPD1-209ENST00000533196 CLN8Q9UBY8 286 aa19.59■□□□□ 0.73
SMPD1-209ENST00000533196 FAM183AA6NL82 134 aa19.58■□□□□ 0.72
SMPD1-209ENST00000533196 ANKRD30BLA7E2S9 258 aa19.58■□□□□ 0.72
SMPD1-209ENST00000533196 PRR23D1E9PI22 279 aaPredicted RBP19.58■□□□□ 0.72
SMPD1-209ENST00000533196 PRR23D2P0DMB1 279 aaPredicted RBP19.58■□□□□ 0.72
SMPD1-209ENST00000533196 ANOS1P23352 680 aa19.58■□□□□ 0.72
SMPD1-209ENST00000533196 CD80P33681 288 aa19.58■□□□□ 0.72
SMPD1-209ENST00000533196 PSMB10P40306 273 aa19.58■□□□□ 0.72
SMPD1-209ENST00000533196 GINS1Q14691 196 aa19.58■□□□□ 0.72
SMPD1-209ENST00000533196 KLF17Q5JT82 389 aaPredicted RBP19.58■□□□□ 0.72
SMPD1-209ENST00000533196 TMEM179BQ7Z7N9 219 aa19.58■□□□□ 0.72
SMPD1-209ENST00000533196 TIGD4Q8IY51 512 aa19.58■□□□□ 0.72
SMPD1-209ENST00000533196 ZDHHC22Q8N966 263 aa19.58■□□□□ 0.72
SMPD1-209ENST00000533196 ZNF454Q8N9F8 522 aa19.58■□□□□ 0.72
SMPD1-209ENST00000533196 BCAS4Q8TDM0 211 aa19.58■□□□□ 0.72
SMPD1-209ENST00000533196 TEX12Q9BXU0 123 aa19.58■□□□□ 0.72
SMPD1-209ENST00000533196 MED20Q9H944 212 aa19.58■□□□□ 0.72
SMPD1-209ENST00000533196 ZMAT3Q9HA38 289 aaKnown RBP19.58■□□□□ 0.72
SMPD1-209ENST00000533196 DNAJB9Q9UBS3 223 aa19.58■□□□□ 0.72
SMPD1-209ENST00000533196 KIR2DS1A0A191URI9 304 aa19.57■□□□□ 0.72
SMPD1-209ENST00000533196 C5orf63A6NC05 138 aa19.57■□□□□ 0.72
SMPD1-209ENST00000533196 LGALS8O00214 317 aa19.57■□□□□ 0.72
SMPD1-209ENST00000533196 PRODHO43272 600 aa19.57■□□□□ 0.72
SMPD1-209ENST00000533196 TBX1O43435 398 aa19.57■□□□□ 0.72
SMPD1-209ENST00000533196 NDUFA2O43678 99 aa19.57■□□□□ 0.72
SMPD1-209ENST00000533196 ANXA2P07355 339 aaKnown RBP19.57■□□□□ 0.72
SMPD1-209ENST00000533196 POU1F1P28069 291 aa19.57■□□□□ 0.72
SMPD1-209ENST00000533196 SNCBQ16143 134 aa19.57■□□□□ 0.72
SMPD1-209ENST00000533196 TIGD6Q17RP2 521 aa19.57■□□□□ 0.72
SMPD1-209ENST00000533196 WDR25Q64LD2 544 aaPredicted RBP19.57■□□□□ 0.72
SMPD1-209ENST00000533196 SPATC1Q76KD6 591 aa19.57■□□□□ 0.72
SMPD1-209ENST00000533196 DOK3Q7L591 496 aa19.57■□□□□ 0.72
SMPD1-209ENST00000533196 SLC16A9Q7RTY1 509 aa19.57■□□□□ 0.72
SMPD1-209ENST00000533196 PRSS45Q7RTY3 260 aa19.57■□□□□ 0.72
SMPD1-209ENST00000533196 SPATA24Q86W54 205 aa19.57■□□□□ 0.72
SMPD1-209ENST00000533196 GCDHQ92947 438 aaPredicted RBP19.57■□□□□ 0.72
SMPD1-209ENST00000533196 OTULINQ96BN8 352 aa19.57■□□□□ 0.72
SMPD1-209ENST00000533196 UPRTQ96BW1 309 aa19.57■□□□□ 0.72
SMPD1-209ENST00000533196 OR51V1Q9H2C8 321 aa19.57■□□□□ 0.72
SMPD1-209ENST00000533196 RGCCQ9H4X1 137 aa19.57■□□□□ 0.72
SMPD1-209ENST00000533196 FAM53CQ9NYF3 392 aa19.57■□□□□ 0.72
SMPD1-209ENST00000533196 ZNF69Q9UC07 566 aa19.57■□□□□ 0.72
SMPD1-209ENST00000533196 N6AMT1Q9Y5N5 214 aa19.57■□□□□ 0.72
SMPD1-209ENST00000533196 TRAV38-1A0A0B4J264 116 aa19.56■□□□□ 0.72
SMPD1-209ENST00000533196 TCRBV3S1A0A5B6 114 aa19.56■□□□□ 0.72
SMPD1-209ENST00000533196 FKBP6O75344 327 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms