RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 LGALS8O00214 317 aa13.12□□□□□ -0.31
CPSF1-205ENST00000531042 ZNF593O00488 134 aaPredicted RBP13.12□□□□□ -0.31
CPSF1-205ENST00000531042 TNFRSF13BO14836 293 aaPredicted RBP13.12□□□□□ -0.31
CPSF1-205ENST00000531042 ENSAO43768 121 aaKnown RBP13.12□□□□□ -0.31
CPSF1-205ENST00000531042 GYPBP06028 91 aa13.12□□□□□ -0.31
CPSF1-205ENST00000531042 SPARCP09486 303 aa13.12□□□□□ -0.31
CPSF1-205ENST00000531042 SLC2A1P11166 492 aa13.12□□□□□ -0.31
CPSF1-205ENST00000531042 SLC25A1P53007 311 aa13.12□□□□□ -0.31
CPSF1-205ENST00000531042 GYS2P54840 703 aa13.12□□□□□ -0.31
CPSF1-205ENST00000531042 GNGT1P63211 74 aa13.12□□□□□ -0.31
CPSF1-205ENST00000531042 IL13RA1P78552 427 aa13.12□□□□□ -0.31
CPSF1-205ENST00000531042 CRMP1Q14194 572 aa13.12□□□□□ -0.31
CPSF1-205ENST00000531042 TAF13Q15543 124 aa13.12□□□□□ -0.31
CPSF1-205ENST00000531042 PRR31Q5SQ13 230 aa13.12□□□□□ -0.31
CPSF1-205ENST00000531042 BRD3OSQ6XYD6 125 aa13.12□□□□□ -0.31
CPSF1-205ENST00000531042 BOLLQ8N9W6 283 aaKnown RBP13.12□□□□□ -0.31
CPSF1-205ENST00000531042 SPERTQ8NA61 448 aa13.12□□□□□ -0.31
CPSF1-205ENST00000531042 OR4Q3Q8NH05 313 aa13.12□□□□□ -0.31
CPSF1-205ENST00000531042 TECTBQ96PL2 329 aa13.12□□□□□ -0.31
CPSF1-205ENST00000531042 MMADHCQ9H3L0 296 aaPredicted RBP13.12□□□□□ -0.31
CPSF1-205ENST00000531042 PRDM13Q9H4Q3 707 aa13.12□□□□□ -0.31
CPSF1-205ENST00000531042 OPA3Q9H6K4 179 aa13.12□□□□□ -0.31
CPSF1-205ENST00000531042 UNKLQ9H9P5 680 aaKnown RBP13.12□□□□□ -0.31
CPSF1-205ENST00000531042 CENPMQ9NSP4 180 aa13.12□□□□□ -0.31
CPSF1-205ENST00000531042 ERVK-18Q9QC07 812 aa13.12□□□□□ -0.31
CPSF1-205ENST00000531042 BAIAP2Q9UQB8 552 aa13.12□□□□□ -0.31
CPSF1-205ENST00000531042 TRRAPQ9Y4A5 3859 aa13.11□□□□□ -0.31
CPSF1-205ENST00000531042 ZNF878C9JN71 531 aa13.11□□□□□ -0.31
CPSF1-205ENST00000531042 C3orf80F5H4A9 247 aa13.11□□□□□ -0.31
CPSF1-205ENST00000531042 CLUP10909 449 aa13.11□□□□□ -0.31
CPSF1-205ENST00000531042 SPI1P17947 270 aa13.11□□□□□ -0.31
CPSF1-205ENST00000531042 MNAT1P51948 309 aa13.11□□□□□ -0.31
CPSF1-205ENST00000531042 BPIFB3P59826 476 aa13.11□□□□□ -0.31
CPSF1-205ENST00000531042 OR8B8Q15620 311 aa13.11□□□□□ -0.31
CPSF1-205ENST00000531042 DEFB112Q30KQ8 113 aa13.11□□□□□ -0.31
CPSF1-205ENST00000531042 CD276Q5ZPR3 534 aa13.11□□□□□ -0.31
CPSF1-205ENST00000531042 C16orf87Q6PH81 154 aa13.11□□□□□ -0.31
CPSF1-205ENST00000531042 OR2T33Q8NG76 320 aa13.11□□□□□ -0.31
CPSF1-205ENST00000531042 OR56B2PQ8NGI1 322 aa13.11□□□□□ -0.31
CPSF1-205ENST00000531042 TAF15Q92804 592 aaKnown RBP eCLIP13.11□□□□□ -0.31
CPSF1-205ENST00000531042 SPSB4Q96A44 273 aa13.11□□□□□ -0.31
CPSF1-205ENST00000531042 DGCR6LQ9BY27 220 aa13.11□□□□□ -0.31
CPSF1-205ENST00000531042 MAGIXQ9H6Y5 334 aa13.11□□□□□ -0.31
CPSF1-205ENST00000531042 ZNF696Q9H7X3 374 aa13.11□□□□□ -0.31
CPSF1-205ENST00000531042 TRIM36Q9NQ86 728 aa13.11□□□□□ -0.31
CPSF1-205ENST00000531042 C1orf123Q9NWV4 160 aa13.11□□□□□ -0.31
CPSF1-205ENST00000531042 VNN3Q9NY84 501 aa13.11□□□□□ -0.31
CPSF1-205ENST00000531042 N6AMT1Q9Y5N5 214 aa13.11□□□□□ -0.31
CPSF1-205ENST00000531042 TRAV38-1A0A0B4J264 116 aa13.1□□□□□ -0.31
CPSF1-205ENST00000531042 OOEPA6NGQ2 149 aa13.1□□□□□ -0.31
CPSF1-205ENST00000531042 POM121CA8CG34 1229 aa13.1□□□□□ -0.31
CPSF1-205ENST00000531042 HOXA3O43365 443 aaPredicted RBP13.1□□□□□ -0.31
CPSF1-205ENST00000531042 ADAM20O43506 726 aa13.1□□□□□ -0.31
CPSF1-205ENST00000531042 XRCC2O43543 280 aa13.1□□□□□ -0.31
CPSF1-205ENST00000531042 NDUFA2O43678 99 aa13.1□□□□□ -0.31
CPSF1-205ENST00000531042 SOX14O95416 240 aa13.1□□□□□ -0.31
CPSF1-205ENST00000531042 LIPFP07098 398 aa13.1□□□□□ -0.31
CPSF1-205ENST00000531042 GRPP07492 148 aa13.1□□□□□ -0.31
CPSF1-205ENST00000531042 BLVRAP53004 296 aa13.1□□□□□ -0.31
CPSF1-205ENST00000531042 MZT1Q08AG7 82 aa13.1□□□□□ -0.31
CPSF1-205ENST00000531042 MICAQ29983 383 aa13.1□□□□□ -0.31
CPSF1-205ENST00000531042 LINC01590Q5TEZ4 76 aa13.1□□□□□ -0.31
CPSF1-205ENST00000531042 GPR157Q5UAW9 335 aa13.1□□□□□ -0.31
CPSF1-205ENST00000531042 OR2T5Q6IEZ7 315 aa13.1□□□□□ -0.31
CPSF1-205ENST00000531042 ZNF826PQ6ZT77 177 aa13.1□□□□□ -0.31
CPSF1-205ENST00000531042 GCSAMQ8N6F7 178 aa13.1□□□□□ -0.31
CPSF1-205ENST00000531042 OR2T29Q8NH02 315 aa13.1□□□□□ -0.31
CPSF1-205ENST00000531042 PCGF1Q9BSM1 259 aa13.1□□□□□ -0.31
CPSF1-205ENST00000531042 ARMC1Q9NVT9 282 aa13.1□□□□□ -0.31
CPSF1-205ENST00000531042 U3KQV3 271 aa13.1□□□□□ -0.31
CPSF1-205ENST00000531042 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.09□□□□□ -0.31
CPSF1-205ENST00000531042 DHRS12A0PJE2 317 aa13.09□□□□□ -0.31
CPSF1-205ENST00000531042 B2RBV5 119 aa13.09□□□□□ -0.31
CPSF1-205ENST00000531042 ZNF879B4DU55 563 aa13.09□□□□□ -0.31
CPSF1-205ENST00000531042 WIPF1O43516 503 aa13.09□□□□□ -0.31
CPSF1-205ENST00000531042 LHBP01229 141 aa13.09□□□□□ -0.31
CPSF1-205ENST00000531042 IFNGP01579 166 aa13.09□□□□□ -0.31
CPSF1-205ENST00000531042 SFTPBP07988 381 aa13.09□□□□□ -0.31
CPSF1-205ENST00000531042 CFHR2P36980 270 aa13.09□□□□□ -0.31
CPSF1-205ENST00000531042 DDOSTP39656 456 aa13.09□□□□□ -0.31
CPSF1-205ENST00000531042 SLC15A1P46059 708 aa13.09□□□□□ -0.31
CPSF1-205ENST00000531042 GRB2P62993 217 aaKnown RBP13.09□□□□□ -0.31
CPSF1-205ENST00000531042 LCN8Q6JVE9 175 aa13.09□□□□□ -0.31
CPSF1-205ENST00000531042 SPATC1Q76KD6 591 aa13.09□□□□□ -0.31
CPSF1-205ENST00000531042 DHFR2Q86XF0 187 aa13.09□□□□□ -0.31
CPSF1-205ENST00000531042 FAM90A1Q86YD7 464 aa13.09□□□□□ -0.31
CPSF1-205ENST00000531042 ARHGAP24Q8N264 748 aa13.09□□□□□ -0.31
CPSF1-205ENST00000531042 OR6K6Q8NGW6 343 aa13.09□□□□□ -0.31
CPSF1-205ENST00000531042 ZDHHC16Q969W1 377 aa13.09□□□□□ -0.31
CPSF1-205ENST00000531042 RASSF4Q9H2L5 321 aa13.09□□□□□ -0.31
CPSF1-205ENST00000531042 MUC13Q9H3R2 512 aa13.09□□□□□ -0.31
CPSF1-205ENST00000531042 REEP1Q9H902 201 aa13.09□□□□□ -0.31
CPSF1-205ENST00000531042 SMURF1Q9HCE7 757 aa13.09□□□□□ -0.31
CPSF1-205ENST00000531042 C14orf119Q9NWQ9 140 aa13.09□□□□□ -0.31
CPSF1-205ENST00000531042 SAMHD1Q9Y3Z3 626 aaKnown RBP13.09□□□□□ -0.31
CPSF1-205ENST00000531042 A6NLC8 198 aa13.08□□□□□ -0.32
CPSF1-205ENST00000531042 RIIAD1A6NNX1 92 aa13.08□□□□□ -0.32
CPSF1-205ENST00000531042 ANKRD30BLA7E2S9 258 aa13.08□□□□□ -0.32
CPSF1-205ENST00000531042 SRRM5B3KS81 715 aa13.08□□□□□ -0.32
CPSF1-205ENST00000531042 P2RY10O00398 339 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms