RNA–Protein interactions for RNA: ENST00000528672.1

CD44-229, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-229ENST00000528672 H3BNH8 94 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 BHLHE40O14503 412 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 SOCS3O14543 225 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 CDIPTO14735 213 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 PHYHO14832 338 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 PPP1R2P9O14990 202 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 PSTPIP1O43586 416 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 CXCL13O43927 109 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 PLIN3O60664 434 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 OR2J3O76001 311 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 UTS2O95399 124 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 TTC4O95801 387 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 FAM107AO95990 144 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 IGHG4P01861 327 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 CD55P08174 381 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 IFI30P13284 250 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 NQO1P15559 274 aaKnown RBP2.62□□□□□ -1.99
CD44-229ENST00000528672 MUC1P15941 1255 aaPredicted RBP2.62□□□□□ -1.99
CD44-229ENST00000528672 PMCHP20382 165 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 IDSP22304 550 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 GABRR2P28476 465 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 FGF9P31371 208 aaPredicted RBP2.62□□□□□ -1.99
CD44-229ENST00000528672 DDOSTP39656 456 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 RPL5P46777 297 aaKnown RBP2.62□□□□□ -1.99
CD44-229ENST00000528672 HLCSP50747 726 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 DAP3P51398 398 aaKnown RBP2.62□□□□□ -1.99
CD44-229ENST00000528672 XKP51811 444 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 AKR1D1P51857 326 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 ACLYP53396 1101 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 OR4D2P58180 307 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 TAS2R39P59534 338 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 ERVPABLB-1P60509 514 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 C1QTNF8P60827 252 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 SLC7A9P82251 487 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 RPL19P84098 196 aaKnown RBP2.62□□□□□ -1.99
CD44-229ENST00000528672 SELENBP1Q13228 472 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 SLC10A1Q14973 349 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 PSG5Q15238 335 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 SF3A2Q15428 464 aaKnown RBP2.62□□□□□ -1.99
CD44-229ENST00000528672 TRAM1Q15629 374 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 MPPED2Q15777 294 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 POU2AF1Q16633 256 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 TMEM176BQ3YBM2 270 aaPredicted RBP2.62□□□□□ -1.99
CD44-229ENST00000528672 RNF212Q495C1 297 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 ZBED5Q49AG3 693 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 LIN52Q52LA3 116 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 ACSBG2Q5FVE4 666 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 ZNF506Q5JVG8 444 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 FAM182AQ5T1J6 154 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 IDNKQ5T6J7 187 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 ZNF774Q6NX45 483 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 REG3GQ6UW15 175 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 ENPP6Q6UWR7 440 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 TMPRSS11AQ6ZMR5 421 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 MBOAT1Q6ZNC8 495 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 AHSA2Q719I0 299 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 ABHD13Q7L211 337 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 GRINAQ7Z429 371 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 FAM220AQ7Z4H9 259 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 LGI3Q8N145 548 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 STPG2Q8N412 459 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 SVOPLQ8N434 492 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 WDSUB1Q8N9V3 476 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 TMEM161BQ8NDZ6 487 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 OR11H1Q8NG94 326 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 OR4K2Q8NGD2 314 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 OR13D1Q8NGV5 346 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 OR10K1Q8NGX5 313 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 OR10X1Q8NGY0 326 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 OR11H2Q8NH07 326 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 CD200R1Q8TD46 325 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 TMEM234Q8WY98 164 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 CREB3L1Q96BA8 519 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 C8orf44Q96CB5 159 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 NUS1Q96E22 293 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 ZBED6CLQ96FA7 236 aaPredicted RBP2.62□□□□□ -1.99
CD44-229ENST00000528672 SFRP2Q96HF1 295 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 MS4A14Q96JA4 679 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 C12orf42Q96LP6 360 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 ZNF75AQ96N20 296 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 ZNF641Q96N77 438 aaPredicted RBP2.62□□□□□ -1.99
CD44-229ENST00000528672 ZFP3Q96NJ6 502 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 IL4I1Q96RQ9 567 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 SERPINI1Q99574 410 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 ECSITQ9BQ95 431 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 AIF1LQ9BQI0 150 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 MED18Q9BUE0 208 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 MND1Q9BWT6 205 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 TM2D1Q9BX74 207 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 BEX2Q9BXY8 128 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 NEUROG2Q9H2A3 272 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 ANKRD19PQ9H560 264 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 ZNF385DQ9H6B1 395 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 TPT1P8Q9HAU6 139 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 WFDC1Q9HC57 220 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 SLC2A9Q9NRM0 540 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 GSKIPQ9P0R6 139 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 CTSZQ9UBR2 303 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 CLN8Q9UBY8 286 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 MUTYHQ9UIF7 546 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms