RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 LYVE1Q9Y5Y7 322 aa12.88□□□□□ -0.35
CLNS1A-210ENST00000528364 IGHV3OR15-7A0A075B7D8 119 aa12.87□□□□□ -0.35
CLNS1A-210ENST00000528364 CENPVL3A0A0U1RRI6 287 aa12.87□□□□□ -0.35
CLNS1A-210ENST00000528364 ZNF879B4DU55 563 aa12.87□□□□□ -0.35
CLNS1A-210ENST00000528364 TNFRSF11BO00300 401 aa12.87□□□□□ -0.35
CLNS1A-210ENST00000528364 ENSAO43768 121 aaKnown RBP12.87□□□□□ -0.35
CLNS1A-210ENST00000528364 GMDSO60547 372 aa12.87□□□□□ -0.35
CLNS1A-210ENST00000528364 PTBP3O95758 552 aaKnown RBP12.87□□□□□ -0.35
CLNS1A-210ENST00000528364 SPARCP09486 303 aa12.87□□□□□ -0.35
CLNS1A-210ENST00000528364 CLUP10909 449 aa12.87□□□□□ -0.35
CLNS1A-210ENST00000528364 MMP9P14780 707 aa12.87□□□□□ -0.35
CLNS1A-210ENST00000528364 TAF13Q15543 124 aa12.87□□□□□ -0.35
CLNS1A-210ENST00000528364 GPR157Q5UAW9 335 aa12.87□□□□□ -0.35
CLNS1A-210ENST00000528364 ZNF770Q6IQ21 691 aaPredicted RBP12.87□□□□□ -0.35
CLNS1A-210ENST00000528364 FIP1L1Q6UN15 594 aaKnown RBP12.87□□□□□ -0.35
CLNS1A-210ENST00000528364 DRAM2Q6UX65 266 aa12.87□□□□□ -0.35
CLNS1A-210ENST00000528364 TREML4Q6UXN2 200 aa12.87□□□□□ -0.35
CLNS1A-210ENST00000528364 Q6YL49 198 aa12.87□□□□□ -0.35
CLNS1A-210ENST00000528364 C11orf53Q8IXP5 236 aa12.87□□□□□ -0.35
CLNS1A-210ENST00000528364 DEFB107AQ8IZN7 70 aa12.87□□□□□ -0.35
CLNS1A-210ENST00000528364 KIR3DL3Q8N743 410 aa12.87□□□□□ -0.35
CLNS1A-210ENST00000528364 OR52L1Q8NGH7 329 aa12.87□□□□□ -0.35
CLNS1A-210ENST00000528364 OR56B2PQ8NGI1 322 aa12.87□□□□□ -0.35
CLNS1A-210ENST00000528364 OR4C15Q8NGM1 316 aa12.87□□□□□ -0.35
CLNS1A-210ENST00000528364 OR2T4Q8NH00 348 aa12.87□□□□□ -0.35
CLNS1A-210ENST00000528364 OR4Q3Q8NH05 313 aa12.87□□□□□ -0.35
CLNS1A-210ENST00000528364 SLAMF6Q96DU3 332 aa12.87□□□□□ -0.35
CLNS1A-210ENST00000528364 COPS4Q9BT78 406 aa12.87□□□□□ -0.35
CLNS1A-210ENST00000528364 TSSK6Q9BXA6 273 aa12.87□□□□□ -0.35
CLNS1A-210ENST00000528364 SLC22A4Q9H015 551 aa12.87□□□□□ -0.35
CLNS1A-210ENST00000528364 PPP1R3EQ9H7J1 279 aa12.87□□□□□ -0.35
CLNS1A-210ENST00000528364 VNN3Q9NY84 501 aa12.87□□□□□ -0.35
CLNS1A-210ENST00000528364 IL20Q9NYY1 176 aa12.87□□□□□ -0.35
CLNS1A-210ENST00000528364 TAGLN3Q9UI15 199 aa12.87□□□□□ -0.35
CLNS1A-210ENST00000528364 COMMD3-BMI1R4GMX3 469 aa12.87□□□□□ -0.35
CLNS1A-210ENST00000528364 A6NLC8 198 aa12.86□□□□□ -0.35
CLNS1A-210ENST00000528364 SRRM5B3KS81 715 aa12.86□□□□□ -0.35
CLNS1A-210ENST00000528364 KRT36O76013 467 aa12.86□□□□□ -0.35
CLNS1A-210ENST00000528364 TOX4O94842 621 aa12.86□□□□□ -0.35
CLNS1A-210ENST00000528364 ATP6V1B2P21281 511 aa12.86□□□□□ -0.35
CLNS1A-210ENST00000528364 ARF6P62330 175 aa12.86□□□□□ -0.35
CLNS1A-210ENST00000528364 RELBQ01201 579 aa12.86□□□□□ -0.35
CLNS1A-210ENST00000528364 CRMP1Q14194 572 aa12.86□□□□□ -0.35
CLNS1A-210ENST00000528364 RASSF6Q6ZTQ3 369 aa12.86□□□□□ -0.35
CLNS1A-210ENST00000528364 CPLX4Q7Z7G2 160 aa12.86□□□□□ -0.35
CLNS1A-210ENST00000528364 FAM90A1Q86YD7 464 aa12.86□□□□□ -0.35
CLNS1A-210ENST00000528364 GCSAMQ8N6F7 178 aa12.86□□□□□ -0.35
CLNS1A-210ENST00000528364 KCNJ15Q99712 375 aa12.86□□□□□ -0.35
CLNS1A-210ENST00000528364 CHIAQ9BZP6 476 aa12.86□□□□□ -0.35
CLNS1A-210ENST00000528364 MRPL15Q9P015 296 aaKnown RBP12.86□□□□□ -0.35
CLNS1A-210ENST00000528364 TRAV38-1A0A0B4J264 116 aa12.85□□□□□ -0.35
CLNS1A-210ENST00000528364 A0A1B0GW55 424 aa12.85□□□□□ -0.35
CLNS1A-210ENST00000528364 OOEPA6NGQ2 149 aa12.85□□□□□ -0.35
CLNS1A-210ENST00000528364 P2RY10O00398 339 aa12.85□□□□□ -0.35
CLNS1A-210ENST00000528364 TBX1O43435 398 aa12.85□□□□□ -0.35
CLNS1A-210ENST00000528364 CCNB2O95067 398 aa12.85□□□□□ -0.35
CLNS1A-210ENST00000528364 LHBP01229 141 aa12.85□□□□□ -0.35
CLNS1A-210ENST00000528364 MELTFP08582 738 aa12.85□□□□□ -0.35
CLNS1A-210ENST00000528364 DUX4L2P0CJ85 424 aa12.85□□□□□ -0.35
CLNS1A-210ENST00000528364 DUX4L3P0CJ86 424 aa12.85□□□□□ -0.35
CLNS1A-210ENST00000528364 DUX4L4P0CJ87 422 aa12.85□□□□□ -0.35
CLNS1A-210ENST00000528364 DUX4L5P0CJ88 424 aa12.85□□□□□ -0.35
CLNS1A-210ENST00000528364 DUX4L6P0CJ89 424 aa12.85□□□□□ -0.35
CLNS1A-210ENST00000528364 DUX4L7P0CJ90 424 aa12.85□□□□□ -0.35
CLNS1A-210ENST00000528364 FMO3P31513 532 aa12.85□□□□□ -0.35
CLNS1A-210ENST00000528364 ENTPD1P49961 510 aa12.85□□□□□ -0.35
CLNS1A-210ENST00000528364 NPY4RP50391 375 aa12.85□□□□□ -0.35
CLNS1A-210ENST00000528364 GYS2P54840 703 aa12.85□□□□□ -0.35
CLNS1A-210ENST00000528364 PCK2Q16822 640 aa12.85□□□□□ -0.35
CLNS1A-210ENST00000528364 CD276Q5ZPR3 534 aa12.85□□□□□ -0.35
CLNS1A-210ENST00000528364 DUX4L9Q6RFH8 374 aaPredicted RBP12.85□□□□□ -0.35
CLNS1A-210ENST00000528364 WDR86Q86TI4 376 aa12.85□□□□□ -0.35
CLNS1A-210ENST00000528364 PDZD9Q8IXQ8 264 aa12.85□□□□□ -0.35
CLNS1A-210ENST00000528364 SGK3Q96BR1 496 aa12.85□□□□□ -0.35
CLNS1A-210ENST00000528364 SEH1LQ96EE3 360 aa12.85□□□□□ -0.35
CLNS1A-210ENST00000528364 WDFY2Q96P53 400 aa12.85□□□□□ -0.35
CLNS1A-210ENST00000528364 NMNAT2Q9BZQ4 307 aa12.85□□□□□ -0.35
CLNS1A-210ENST00000528364 TRIM15Q9C019 465 aa12.85□□□□□ -0.35
CLNS1A-210ENST00000528364 SIRPDQ9H106 197 aa12.85□□□□□ -0.35
CLNS1A-210ENST00000528364 SLITRK2Q9H156 845 aa12.85□□□□□ -0.35
CLNS1A-210ENST00000528364 MED20Q9H944 212 aa12.85□□□□□ -0.35
CLNS1A-210ENST00000528364 TBC1D23Q9NUY8 699 aa12.85□□□□□ -0.35
CLNS1A-210ENST00000528364 ARMC1Q9NVT9 282 aa12.85□□□□□ -0.35
CLNS1A-210ENST00000528364 C1RLQ9NZP8 487 aa12.85□□□□□ -0.35
CLNS1A-210ENST00000528364 DUX4Q9UBX2 424 aa12.85□□□□□ -0.35
CLNS1A-210ENST00000528364 MMP24Q9Y5R2 645 aa12.85□□□□□ -0.35
CLNS1A-210ENST00000528364 hCG_1807616A0A1W2PRN6 198 aa12.84□□□□□ -0.35
CLNS1A-210ENST00000528364 DHRS12A0PJE2 317 aa12.84□□□□□ -0.35
CLNS1A-210ENST00000528364 DVL1O14640 695 aa12.84□□□□□ -0.35
CLNS1A-210ENST00000528364 SOX14O95416 240 aa12.84□□□□□ -0.35
CLNS1A-210ENST00000528364 SPI1P17947 270 aa12.84□□□□□ -0.35
CLNS1A-210ENST00000528364 PRB3Q04118 309 aaPredicted RBP12.84□□□□□ -0.35
CLNS1A-210ENST00000528364 RPL13AP3Q6NVV1 102 aa12.84□□□□□ -0.35
CLNS1A-210ENST00000528364 BTN2A1Q7KYR7 527 aa12.84□□□□□ -0.35
CLNS1A-210ENST00000528364 AQP11Q8NBQ7 271 aa12.84□□□□□ -0.35
CLNS1A-210ENST00000528364 PLPP7Q8NBV4 271 aa12.84□□□□□ -0.35
CLNS1A-210ENST00000528364 LHX4Q969G2 390 aa12.84□□□□□ -0.35
CLNS1A-210ENST00000528364 CCL13Q99616 98 aa12.84□□□□□ -0.35
CLNS1A-210ENST00000528364 NOX4Q9NPH5 578 aa12.84□□□□□ -0.35
CLNS1A-210ENST00000528364 PDP1Q9P0J1 537 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms