RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 DHRS2Q13268 280 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 PMS2P11Q13670 270 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 NSDHLQ15738 373 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 PRSS8Q16651 343 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 ACOT6Q3I5F7 207 aaPredicted RBP5.2□□□□□ -1.58
CD44-225ENST00000527326 TMEM176BQ3YBM2 270 aaPredicted RBP5.2□□□□□ -1.58
CD44-225ENST00000527326 FAM27D1Q5T7N8 215 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 CPTPQ5TA50 214 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 AADACL3Q5VUY0 350 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 SAMD13Q5VXD3 122 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 PRR27Q6MZM9 219 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 PWWP2BQ6NUJ5 590 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 NOXRED1Q6NXP6 359 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 DNM1P34Q6PK57 102 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 TMEM205Q6UW68 189 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 MPZL3Q6UWV2 235 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 TEX43Q6ZNM6 134 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 FCRLAQ7L513 359 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 SLC25A42Q86VD7 318 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 ZNF101Q8IZC7 436 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 SELENOHQ8IZQ5 122 aaKnown RBP5.2□□□□□ -1.58
CD44-225ENST00000527326 CLECL1Q8IZS7 167 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 CELF5Q8N6W0 485 aaKnown RBP5.2□□□□□ -1.58
CD44-225ENST00000527326 ZDHHC22Q8N966 263 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 ZSCAN4Q8NAM6 433 aaPredicted RBP5.2□□□□□ -1.58
CD44-225ENST00000527326 TMEM229BQ8NBD8 167 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 SIDT2Q8NBJ9 832 aaKnown RBP5.2□□□□□ -1.58
CD44-225ENST00000527326 OR4X1Q8NH49 305 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 OR4S2Q8NH73 311 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 MFSD8Q8NHS3 518 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 BAHD1Q8TBE0 780 aaPredicted RBP5.2□□□□□ -1.58
CD44-225ENST00000527326 CLEC4CQ8WTT0 213 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 APOBEC4Q8WW27 367 aaKnown RBP5.2□□□□□ -1.58
CD44-225ENST00000527326 C11orf40Q8WZ69 217 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 ESAMQ96AP7 390 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 ARRDC3Q96B67 414 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 RSPRY1Q96DX4 576 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 ZNF479Q96JC4 524 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 PGLYRP3Q96LB9 341 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 JSRP1Q96MG2 331 aaPredicted RBP5.2□□□□□ -1.58
CD44-225ENST00000527326 CIB3Q96Q77 187 aaPredicted RBP5.2□□□□□ -1.58
CD44-225ENST00000527326 IMMP2LQ96T52 175 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 PRRX2Q99811 253 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 ORAI3Q9BRQ5 295 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 GINS3Q9BRX5 216 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 FOXQ1Q9C009 403 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 CTDSP1Q9GZU7 261 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 SLCO5A1Q9H2Y9 848 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 OR51I1Q9H343 314 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 FZD8Q9H461 694 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 ISG20L2Q9H9L3 353 aaKnown RBP5.2□□□□□ -1.58
CD44-225ENST00000527326 KLHL28Q9NXS3 571 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 RNF150Q9ULK6 438 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 FAM50BQ9Y247 325 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 ENTPD2Q9Y5L3 495 aa5.2□□□□□ -1.58
CD44-225ENST00000527326 TNRC18O15417 2968 aaPredicted RBP5.2□□□□□ -1.58
CD44-225ENST00000527326 YDJCA8MPS7 323 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 F5H5T6 163 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 FAM72CH0Y354 149 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 M0QZ24 198 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 HBP1O60381 514 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 MSCO60682 206 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 RAMP1O60894 148 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 RAMP3O60896 148 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 SCGB1D2O95969 90 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 PDYNP01213 254 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 C1QCP02747 245 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 CSTBP04080 98 aaKnown RBP5.19□□□□□ -1.58
CD44-225ENST00000527326 CHRM2P08172 466 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 SEC11BP0C7V7 166 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 DANCRP0C864 163 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 OR13C7P0DN81 318 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 GZMHP20718 246 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 ANOS1P23352 680 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 TACR1P25103 407 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 LMO1P25800 156 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 CD1BP29016 333 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 OPRD1P41143 372 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 TFPI2P48307 235 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 CAMLGP49069 296 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 TAS2R31P59538 309 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 ST3GAL3Q11203 375 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 LASP1Q14847 261 aaKnown RBP5.19□□□□□ -1.58
CD44-225ENST00000527326 DUSP5Q16690 384 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 C5orf64Q2M2E5 130 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 TCTN1Q2MV58 587 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 PGGHGQ32M88 737 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 LDLRAD2Q5SZI1 272 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 LCE1DQ5T752 114 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 FAM72AQ5TYM5 149 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 FAM72DQ6L9T8 149 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 REEP3Q6NUK4 255 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 RPUSD3Q6P087 351 aaKnown RBP5.19□□□□□ -1.58
CD44-225ENST00000527326 ZNF343Q6P1L6 599 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 NIPAL3Q6P499 406 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 LEG1Q6P5S2 330 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 MED25Q71SY5 747 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 AMIGO3Q86WK7 504 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 FAM72BQ86X60 149 aa5.19□□□□□ -1.58
CD44-225ENST00000527326 KDM8Q8N371 416 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms