RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 TRBV4-1A0A0J9YWV2 114 aa13.27□□□□□ -0.29
PTPRU-210ENST00000527027 C5orf63A6NC05 138 aa13.27□□□□□ -0.29
PTPRU-210ENST00000527027 GGT3PA6NGU5 568 aa13.27□□□□□ -0.29
PTPRU-210ENST00000527027 M0R135 149 aa13.27□□□□□ -0.29
PTPRU-210ENST00000527027 ARPC3O15145 178 aa13.27□□□□□ -0.29
PTPRU-210ENST00000527027 SLC22A2O15244 555 aa13.27□□□□□ -0.29
PTPRU-210ENST00000527027 DCTN3O75935 186 aa13.27□□□□□ -0.29
PTPRU-210ENST00000527027 TSPAN9O75954 239 aa13.27□□□□□ -0.29
PTPRU-210ENST00000527027 LHBP01229 141 aa13.27□□□□□ -0.29
PTPRU-210ENST00000527027 HLA-DQA2P01906 255 aa13.27□□□□□ -0.29
PTPRU-210ENST00000527027 GRPP07492 148 aa13.27□□□□□ -0.29
PTPRU-210ENST00000527027 RHCEP18577 417 aa13.27□□□□□ -0.29
PTPRU-210ENST00000527027 ZNF92Q03936 586 aa13.27□□□□□ -0.29
PTPRU-210ENST00000527027 DBPQ10586 325 aaPredicted RBP13.27□□□□□ -0.29
PTPRU-210ENST00000527027 SEC23BQ15437 767 aa13.27□□□□□ -0.29
PTPRU-210ENST00000527027 RFX4Q33E94 735 aa13.27□□□□□ -0.29
PTPRU-210ENST00000527027 FBLN7Q53RD9 439 aa13.27□□□□□ -0.29
PTPRU-210ENST00000527027 TEX36Q5VZQ5 186 aa13.27□□□□□ -0.29
PTPRU-210ENST00000527027 ZNF826PQ6ZT77 177 aa13.27□□□□□ -0.29
PTPRU-210ENST00000527027 FAM90A1Q86YD7 464 aa13.27□□□□□ -0.29
PTPRU-210ENST00000527027 CCDC197Q8NCU1 140 aa13.27□□□□□ -0.29
PTPRU-210ENST00000527027 SPTSSAQ969W0 71 aa13.27□□□□□ -0.29
PTPRU-210ENST00000527027 ZNF799Q96GE5 643 aa13.27□□□□□ -0.29
PTPRU-210ENST00000527027 KRCC1Q9NPI7 259 aaPredicted RBP13.27□□□□□ -0.29
PTPRU-210ENST00000527027 RPRD1BQ9NQG5 326 aaKnown RBP13.27□□□□□ -0.29
PTPRU-210ENST00000527027 MRPL15Q9P015 296 aaKnown RBP13.27□□□□□ -0.29
PTPRU-210ENST00000527027 NDUFAF4Q9P032 175 aa13.27□□□□□ -0.29
PTPRU-210ENST00000527027 CAB39Q9Y376 341 aaPredicted RBP13.27□□□□□ -0.29
PTPRU-210ENST00000527027 CAPN7Q9Y6W3 813 aa13.27□□□□□ -0.29
PTPRU-210ENST00000527027 A0A1B0GVI7 797 aa13.26□□□□□ -0.29
PTPRU-210ENST00000527027 NME4O00746 187 aa13.26□□□□□ -0.29
PTPRU-210ENST00000527027 FBP1P09467 338 aa13.26□□□□□ -0.29
PTPRU-210ENST00000527027 HIST1H1CP16403 213 aaKnown RBP13.26□□□□□ -0.29
PTPRU-210ENST00000527027 MZT1Q08AG7 82 aa13.26□□□□□ -0.29
PTPRU-210ENST00000527027 POU4F2Q12837 409 aa13.26□□□□□ -0.29
PTPRU-210ENST00000527027 SF3A3Q12874 501 aaKnown RBP eCLIP13.26□□□□□ -0.29
PTPRU-210ENST00000527027 SNAI3Q3KNW1 292 aa13.26□□□□□ -0.29
PTPRU-210ENST00000527027 DHRS7BQ6IAN0 325 aaPredicted RBP13.26□□□□□ -0.29
PTPRU-210ENST00000527027 VMO1Q7Z5L0 202 aa13.26□□□□□ -0.29
PTPRU-210ENST00000527027 OR4K13Q8NH42 304 aa13.26□□□□□ -0.29
PTPRU-210ENST00000527027 NPRL2Q8WTW4 380 aa13.26□□□□□ -0.29
PTPRU-210ENST00000527027 ST8SIA4Q92187 359 aa13.26□□□□□ -0.29
PTPRU-210ENST00000527027 MAP6Q96JE9 813 aa13.26□□□□□ -0.29
PTPRU-210ENST00000527027 HOPXQ9BPY8 73 aaPredicted RBP13.26□□□□□ -0.29
PTPRU-210ENST00000527027 KCNG2Q9UJ96 466 aa13.26□□□□□ -0.29
PTPRU-210ENST00000527027 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.25□□□□□ -0.29
PTPRU-210ENST00000527027 ZNF816-ZNF321PA0A0X1KG74 233 aa13.25□□□□□ -0.29
PTPRU-210ENST00000527027 hCG_1807616A0A1W2PRN6 198 aa13.25□□□□□ -0.29
PTPRU-210ENST00000527027 OR6C68A6NDL8 312 aa13.25□□□□□ -0.29
PTPRU-210ENST00000527027 BTBD17A6NE02 478 aa13.25□□□□□ -0.29
PTPRU-210ENST00000527027 A6NLC8 198 aa13.25□□□□□ -0.29
PTPRU-210ENST00000527027 CSF1P09603 554 aa13.25□□□□□ -0.29
PTPRU-210ENST00000527027 SLC6A6P31641 620 aa13.25□□□□□ -0.29
PTPRU-210ENST00000527027 TGFBR2P37173 567 aa13.25□□□□□ -0.29
PTPRU-210ENST00000527027 GSK3BP49841 420 aa13.25□□□□□ -0.29
PTPRU-210ENST00000527027 SLC7A2P52569 658 aa13.25□□□□□ -0.29
PTPRU-210ENST00000527027 METAP1DQ6UB28 335 aaPredicted RBP13.25□□□□□ -0.29
PTPRU-210ENST00000527027 LY6G5BQ8NDX9 201 aa13.25□□□□□ -0.29
PTPRU-210ENST00000527027 OR52J3Q8NH60 311 aa13.25□□□□□ -0.29
PTPRU-210ENST00000527027 OR2AE1Q8NHA4 323 aa13.25□□□□□ -0.29
PTPRU-210ENST00000527027 RP9Q8TA86 221 aaKnown RBP13.25□□□□□ -0.29
PTPRU-210ENST00000527027 FAM162AQ96A26 154 aa13.25□□□□□ -0.29
PTPRU-210ENST00000527027 C7orf34Q96L11 122 aa13.25□□□□□ -0.29
PTPRU-210ENST00000527027 DMRTB1Q96MA1 342 aa13.25□□□□□ -0.29
PTPRU-210ENST00000527027 FUZQ9BT04 418 aa13.25□□□□□ -0.29
PTPRU-210ENST00000527027 OR52D1Q9H346 318 aa13.25□□□□□ -0.29
PTPRU-210ENST00000527027 C14orf119Q9NWQ9 140 aa13.25□□□□□ -0.29
PTPRU-210ENST00000527027 MRPL22Q9NWU5 206 aaKnown RBP13.25□□□□□ -0.29
PTPRU-210ENST00000527027 ZNRD1Q9P1U0 126 aa13.25□□□□□ -0.29
PTPRU-210ENST00000527027 VPREB3Q9UKI3 123 aa13.25□□□□□ -0.29
PTPRU-210ENST00000527027 IGHV3OR15-7A0A075B7D8 119 aa13.24□□□□□ -0.29
PTPRU-210ENST00000527027 BHLHE40O14503 412 aa13.24□□□□□ -0.29
PTPRU-210ENST00000527027 ZNF823P16415 610 aa13.24□□□□□ -0.29
PTPRU-210ENST00000527027 NOS3P29474 1203 aa13.24□□□□□ -0.29
PTPRU-210ENST00000527027 OTX1P32242 354 aaPredicted RBP13.24□□□□□ -0.29
PTPRU-210ENST00000527027 GLYATL3Q5SZD4 288 aa13.24□□□□□ -0.29
PTPRU-210ENST00000527027 DRAM2Q6UX65 266 aa13.24□□□□□ -0.29
PTPRU-210ENST00000527027 FANK1Q8TC84 345 aa13.24□□□□□ -0.29
PTPRU-210ENST00000527027 DHRS1Q96LJ7 313 aa13.24□□□□□ -0.29
PTPRU-210ENST00000527027 CCL13Q99616 98 aa13.24□□□□□ -0.29
PTPRU-210ENST00000527027 IFT27Q9BW83 186 aa13.24□□□□□ -0.29
PTPRU-210ENST00000527027 SEMA6AQ9H2E6 1030 aa13.24□□□□□ -0.29
PTPRU-210ENST00000527027 ONECUT1Q9UBC0 465 aa13.24□□□□□ -0.29
PTPRU-210ENST00000527027 IDH3BO43837 385 aa13.23□□□□□ -0.29
PTPRU-210ENST00000527027 DIRAS1O95057 198 aa13.23□□□□□ -0.29
PTPRU-210ENST00000527027 MUC1P15941 1255 aaPredicted RBP13.23□□□□□ -0.29
PTPRU-210ENST00000527027 NCK1P16333 377 aa13.23□□□□□ -0.29
PTPRU-210ENST00000527027 EEF1B2P24534 225 aaKnown RBP13.23□□□□□ -0.29
PTPRU-210ENST00000527027 GRK5P34947 590 aa13.23□□□□□ -0.29
PTPRU-210ENST00000527027 GUCA2AQ02747 115 aa13.23□□□□□ -0.29
PTPRU-210ENST00000527027 EGR3Q06889 387 aa13.23□□□□□ -0.29
PTPRU-210ENST00000527027 KRT72Q14CN4 511 aa13.23□□□□□ -0.29
PTPRU-210ENST00000527027 MICBQ29980 383 aa13.23□□□□□ -0.29
PTPRU-210ENST00000527027 CMTM4Q8IZR5 234 aa13.23□□□□□ -0.29
PTPRU-210ENST00000527027 FGFRL1Q8N441 504 aa13.23□□□□□ -0.29
PTPRU-210ENST00000527027 GALNT4Q8N4A0 578 aa13.23□□□□□ -0.29
PTPRU-210ENST00000527027 SDR9C7Q8NEX9 313 aa13.23□□□□□ -0.29
PTPRU-210ENST00000527027 FN3KQ9H479 309 aa13.23□□□□□ -0.29
PTPRU-210ENST00000527027 RNPEPL1Q9HAU8 725 aa13.23□□□□□ -0.29
PTPRU-210ENST00000527027 G3V4G9 280 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms