RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 Q6ZSV7 163 aa11.78□□□□□ -0.52
CPSF1-201ENST00000526271 ZNF826PQ6ZT77 177 aa11.78□□□□□ -0.52
CPSF1-201ENST00000526271 SPATA24Q86W54 205 aa11.78□□□□□ -0.52
CPSF1-201ENST00000526271 SLC26A10Q8NG04 563 aa11.78□□□□□ -0.52
CPSF1-201ENST00000526271 CANT1Q8WVQ1 401 aa11.78□□□□□ -0.52
CPSF1-201ENST00000526271 ZNRF4Q8WWF5 429 aa11.78□□□□□ -0.52
CPSF1-201ENST00000526271 PLEKHA8Q96JA3 519 aa11.78□□□□□ -0.52
CPSF1-201ENST00000526271 WDFY2Q96P53 400 aa11.78□□□□□ -0.52
CPSF1-201ENST00000526271 TMEM100Q9NV29 134 aa11.78□□□□□ -0.52
CPSF1-201ENST00000526271 MRPL22Q9NWU5 206 aaKnown RBP11.78□□□□□ -0.52
CPSF1-201ENST00000526271 NDUFAF4Q9P032 175 aa11.78□□□□□ -0.52
CPSF1-201ENST00000526271 B9D1Q9UPM9 204 aa11.78□□□□□ -0.52
CPSF1-201ENST00000526271 RNF114Q9Y508 228 aa11.78□□□□□ -0.52
CPSF1-201ENST00000526271 RYR3Q15413 4870 aa11.77□□□□□ -0.52
CPSF1-201ENST00000526271 DHRS12A0PJE2 317 aa11.77□□□□□ -0.53
CPSF1-201ENST00000526271 ANKRD65E5RJM6 399 aa11.77□□□□□ -0.53
CPSF1-201ENST00000526271 XKRYO14609 159 aa11.77□□□□□ -0.53
CPSF1-201ENST00000526271 ENSAO43768 121 aaKnown RBP11.77□□□□□ -0.53
CPSF1-201ENST00000526271 NDUFB2O95178 105 aa11.77□□□□□ -0.53
CPSF1-201ENST00000526271 AMY2BP19961 511 aa11.77□□□□□ -0.53
CPSF1-201ENST00000526271 IER3P46695 156 aa11.77□□□□□ -0.53
CPSF1-201ENST00000526271 POU4F2Q12837 409 aa11.77□□□□□ -0.53
CPSF1-201ENST00000526271 SNAI3Q3KNW1 292 aa11.77□□□□□ -0.53
CPSF1-201ENST00000526271 FAM98BQ52LJ0 330 aaKnown RBP11.77□□□□□ -0.53
CPSF1-201ENST00000526271 WDR86Q86TI4 376 aa11.77□□□□□ -0.53
CPSF1-201ENST00000526271 LDLRAD3Q86YD5 345 aa11.77□□□□□ -0.53
CPSF1-201ENST00000526271 PDZD9Q8IXQ8 264 aa11.77□□□□□ -0.53
CPSF1-201ENST00000526271 CELF2-AS1Q8N7Q2 184 aa11.77□□□□□ -0.53
CPSF1-201ENST00000526271 PAPD5Q8NDF8 572 aaKnown RBP11.77□□□□□ -0.53
CPSF1-201ENST00000526271 SLCO4A1Q96BD0 722 aa11.77□□□□□ -0.53
CPSF1-201ENST00000526271 MAP6Q96JE9 813 aa11.77□□□□□ -0.53
CPSF1-201ENST00000526271 COG8Q96MW5 612 aa11.77□□□□□ -0.53
CPSF1-201ENST00000526271 FN3KQ9H479 309 aa11.77□□□□□ -0.53
CPSF1-201ENST00000526271 ENPP4Q9Y6X5 453 aa11.77□□□□□ -0.53
CPSF1-201ENST00000526271 V9GYQ6 96 aa11.77□□□□□ -0.53
CPSF1-201ENST00000526271 IGHV1-69DA0A0B4J2H0 117 aa11.76□□□□□ -0.53
CPSF1-201ENST00000526271 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.76□□□□□ -0.53
CPSF1-201ENST00000526271 TOX4O94842 621 aa11.76□□□□□ -0.53
CPSF1-201ENST00000526271 DIRAS1O95057 198 aa11.76□□□□□ -0.53
CPSF1-201ENST00000526271 IGHV1-69P01742 117 aa11.76□□□□□ -0.53
CPSF1-201ENST00000526271 RAP2AP10114 183 aa11.76□□□□□ -0.53
CPSF1-201ENST00000526271 RHCEP18577 417 aa11.76□□□□□ -0.53
CPSF1-201ENST00000526271 RPS27P42677 84 aaKnown RBP11.76□□□□□ -0.53
CPSF1-201ENST00000526271 KPNB1Q14974 876 aaKnown RBP11.76□□□□□ -0.53
CPSF1-201ENST00000526271 GPR139Q6DWJ6 353 aa11.76□□□□□ -0.53
CPSF1-201ENST00000526271 ZNF620Q6ZNG0 422 aa11.76□□□□□ -0.53
CPSF1-201ENST00000526271 NLRC3Q7RTR2 1065 aa11.76□□□□□ -0.53
CPSF1-201ENST00000526271 FAM90A1Q86YD7 464 aa11.76□□□□□ -0.53
CPSF1-201ENST00000526271 C11orf53Q8IXP5 236 aa11.76□□□□□ -0.53
CPSF1-201ENST00000526271 GCSAMQ8N6F7 178 aa11.76□□□□□ -0.53
CPSF1-201ENST00000526271 ZSCAN4Q8NAM6 433 aaPredicted RBP11.76□□□□□ -0.53
CPSF1-201ENST00000526271 GJC3Q8NFK1 279 aa11.76□□□□□ -0.53
CPSF1-201ENST00000526271 RSRC1Q96IZ7 334 aaKnown RBP11.76□□□□□ -0.53
CPSF1-201ENST00000526271 FAM71F1Q96KD3 344 aaPredicted RBP11.76□□□□□ -0.53
CPSF1-201ENST00000526271 CHID1Q9BWS9 393 aa11.76□□□□□ -0.53
CPSF1-201ENST00000526271 HDHD2Q9H0R4 259 aa11.76□□□□□ -0.53
CPSF1-201ENST00000526271 PPP1R3EQ9H7J1 279 aa11.76□□□□□ -0.53
CPSF1-201ENST00000526271 ACOXLQ9NUZ1 547 aa11.76□□□□□ -0.53
CPSF1-201ENST00000526271 POMT1Q9Y6A1 747 aa11.76□□□□□ -0.53
CPSF1-201ENST00000526271 TET2Q6N021 2002 aaPredicted RBP11.76□□□□□ -0.53
CPSF1-201ENST00000526271 SLC22A31A6NKX4 558 aa11.75□□□□□ -0.53
CPSF1-201ENST00000526271 LGALS8O00214 317 aa11.75□□□□□ -0.53
CPSF1-201ENST00000526271 P2RY10O00398 339 aa11.75□□□□□ -0.53
CPSF1-201ENST00000526271 OR10H3O60404 316 aa11.75□□□□□ -0.53
CPSF1-201ENST00000526271 FABP3P05413 133 aa11.75□□□□□ -0.53
CPSF1-201ENST00000526271 CA6P23280 308 aa11.75□□□□□ -0.53
CPSF1-201ENST00000526271 BPIFB3P59826 476 aa11.75□□□□□ -0.53
CPSF1-201ENST00000526271 ARF6P62330 175 aa11.75□□□□□ -0.53
CPSF1-201ENST00000526271 ZNF92Q03936 586 aa11.75□□□□□ -0.53
CPSF1-201ENST00000526271 LYPD4Q6UWN0 246 aa11.75□□□□□ -0.53
CPSF1-201ENST00000526271 ZDHHC21Q8IVQ6 265 aa11.75□□□□□ -0.53
CPSF1-201ENST00000526271 OR5L1Q8NGL2 311 aa11.75□□□□□ -0.53
CPSF1-201ENST00000526271 OR2AE1Q8NHA4 323 aa11.75□□□□□ -0.53
CPSF1-201ENST00000526271 DYRK2Q92630 601 aa11.75□□□□□ -0.53
CPSF1-201ENST00000526271 LHX4Q969G2 390 aa11.75□□□□□ -0.53
CPSF1-201ENST00000526271 SEH1LQ96EE3 360 aa11.75□□□□□ -0.53
CPSF1-201ENST00000526271 DHRS1Q96LJ7 313 aa11.75□□□□□ -0.53
CPSF1-201ENST00000526271 TECTBQ96PL2 329 aa11.75□□□□□ -0.53
CPSF1-201ENST00000526271 NMNAT3Q96T66 252 aa11.75□□□□□ -0.53
CPSF1-201ENST00000526271 DDOQ99489 341 aa11.75□□□□□ -0.53
CPSF1-201ENST00000526271 ARMC1Q9NVT9 282 aa11.75□□□□□ -0.53
CPSF1-201ENST00000526271 CYB5R1Q9UHQ9 305 aa11.75□□□□□ -0.53
CPSF1-201ENST00000526271 AURKCQ9UQB9 309 aa11.75□□□□□ -0.53
CPSF1-201ENST00000526271 DNAH9Q9NYC9 4486 aa11.74□□□□□ -0.53
CPSF1-201ENST00000526271 IGHV3OR15-7A0A075B7D8 119 aa11.74□□□□□ -0.53
CPSF1-201ENST00000526271 A0A1W2PRQ8 180 aa11.74□□□□□ -0.53
CPSF1-201ENST00000526271 OR6C68A6NDL8 312 aa11.74□□□□□ -0.53
CPSF1-201ENST00000526271 LRRC30A6NM36 301 aa11.74□□□□□ -0.53
CPSF1-201ENST00000526271 CD300LBA8K4G0 201 aa11.74□□□□□ -0.53
CPSF1-201ENST00000526271 F5H5K5 113 aa11.74□□□□□ -0.53
CPSF1-201ENST00000526271 ADAM20O43506 726 aa11.74□□□□□ -0.53
CPSF1-201ENST00000526271 LHBP01229 141 aa11.74□□□□□ -0.53
CPSF1-201ENST00000526271 GYPAP02724 150 aa11.74□□□□□ -0.53
CPSF1-201ENST00000526271 DGCR6Q14129 220 aa11.74□□□□□ -0.53
CPSF1-201ENST00000526271 DPY19L2P2Q6ZN68 376 aa11.74□□□□□ -0.53
CPSF1-201ENST00000526271 ADCK1Q86TW2 530 aa11.74□□□□□ -0.53
CPSF1-201ENST00000526271 ZBTB46Q86UZ6 589 aa11.74□□□□□ -0.53
CPSF1-201ENST00000526271 CYP4Z1Q86W10 505 aa11.74□□□□□ -0.53
CPSF1-201ENST00000526271 C10orf67Q8IYJ2 551 aa11.74□□□□□ -0.53
CPSF1-201ENST00000526271 C1orf87Q8N0U7 546 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms