RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 LHFPL3Q86UP9 236 aa17.72■□□□□ 0.43
CD44-222ENST00000526025 OR2AE1Q8NHA4 323 aa17.72■□□□□ 0.43
CD44-222ENST00000526025 NEU4Q8WWR8 484 aaPredicted RBP17.72■□□□□ 0.43
CD44-222ENST00000526025 RORBQ92753 470 aa17.72■□□□□ 0.43
CD44-222ENST00000526025 REEP6Q96HR9 211 aa17.72■□□□□ 0.43
CD44-222ENST00000526025 SIGLEC11Q96RL6 698 aa17.72■□□□□ 0.43
CD44-222ENST00000526025 DIRC2Q96SL1 478 aa17.72■□□□□ 0.43
CD44-222ENST00000526025 BRD7Q9NPI1 651 aa17.72■□□□□ 0.43
CD44-222ENST00000526025 ACOXLQ9NUZ1 547 aa17.72■□□□□ 0.43
CD44-222ENST00000526025 SCN3BQ9NY72 215 aa17.72■□□□□ 0.43
CD44-222ENST00000526025 ZDHHC8Q9ULC8 765 aa17.72■□□□□ 0.43
CD44-222ENST00000526025 hCG_38984A0A1B0GV85 526 aa17.71■□□□□ 0.43
CD44-222ENST00000526025 ATP6V1B1P15313 513 aa17.71■□□□□ 0.43
CD44-222ENST00000526025 EFNA4P52798 201 aa17.71■□□□□ 0.43
CD44-222ENST00000526025 ATP5J2P56134 94 aa17.71■□□□□ 0.43
CD44-222ENST00000526025 OR12D2P58182 307 aa17.71■□□□□ 0.43
CD44-222ENST00000526025 MFGE8Q08431 387 aaPredicted RBP17.71■□□□□ 0.43
CD44-222ENST00000526025 FAM209AQ5JX71 171 aa17.71■□□□□ 0.43
CD44-222ENST00000526025 BCL2L15Q5TBC7 163 aa17.71■□□□□ 0.43
CD44-222ENST00000526025 OR2T2Q6IF00 324 aa17.71■□□□□ 0.43
CD44-222ENST00000526025 PRSS57Q6UWY2 283 aa17.71■□□□□ 0.43
CD44-222ENST00000526025 CATSPERDQ86XM0 798 aa17.71■□□□□ 0.43
CD44-222ENST00000526025 ELMOD2Q8IZ81 293 aa17.71■□□□□ 0.43
CD44-222ENST00000526025 OR8G5Q8NG78 346 aa17.71■□□□□ 0.43
CD44-222ENST00000526025 CNBD2Q96M20 576 aa17.71■□□□□ 0.43
CD44-222ENST00000526025 RHNO1Q9BSD3 238 aa17.71■□□□□ 0.43
CD44-222ENST00000526025 CHCHD3Q9NX63 227 aaKnown RBP17.71■□□□□ 0.43
CD44-222ENST00000526025 OR52A1Q9UKL2 312 aa17.71■□□□□ 0.43
CD44-222ENST00000526025 CAB39Q9Y376 341 aaPredicted RBP17.71■□□□□ 0.43
CD44-222ENST00000526025 TPRKBQ9Y3C4 175 aa17.71■□□□□ 0.43
CD44-222ENST00000526025 N6AMT1Q9Y5N5 214 aa17.71■□□□□ 0.43
CD44-222ENST00000526025 LOC390937A0A1W2PQ73 354 aa17.7■□□□□ 0.42
CD44-222ENST00000526025 CD300LBA8K4G0 201 aa17.7■□□□□ 0.42
CD44-222ENST00000526025 ZNF81P51508 661 aa17.7■□□□□ 0.42
CD44-222ENST00000526025 FAM3AP98173 230 aa17.7■□□□□ 0.42
CD44-222ENST00000526025 OR8B8Q15620 311 aa17.7■□□□□ 0.42
CD44-222ENST00000526025 ALKBH6Q3KRA9 238 aa17.7■□□□□ 0.42
CD44-222ENST00000526025 RBM48Q5RL73 367 aaKnown RBP17.7■□□□□ 0.42
CD44-222ENST00000526025 TMPRSS11AQ6ZMR5 421 aa17.7■□□□□ 0.42
CD44-222ENST00000526025 AHSA2Q719I0 299 aa17.7■□□□□ 0.42
CD44-222ENST00000526025 ZNF540Q8NDQ6 660 aa17.7■□□□□ 0.42
CD44-222ENST00000526025 OR52N1Q8NH53 320 aa17.7■□□□□ 0.42
CD44-222ENST00000526025 MYDGFQ969H8 173 aa17.7■□□□□ 0.42
CD44-222ENST00000526025 RNF166Q96A37 237 aaPredicted RBP17.7■□□□□ 0.42
CD44-222ENST00000526025 PELI1Q96FA3 418 aa17.7■□□□□ 0.42
CD44-222ENST00000526025 C4orf36Q96KX1 117 aa17.7■□□□□ 0.42
CD44-222ENST00000526025 SORCS2Q96PQ0 1159 aa17.7■□□□□ 0.42
CD44-222ENST00000526025 VRK1Q99986 396 aaPredicted RBP17.7■□□□□ 0.42
CD44-222ENST00000526025 SLC30A2Q9BRI3 323 aa17.7■□□□□ 0.42
CD44-222ENST00000526025 SLC22A4Q9H015 551 aa17.7■□□□□ 0.42
CD44-222ENST00000526025 MRPL15Q9P015 296 aaKnown RBP17.7■□□□□ 0.42
CD44-222ENST00000526025 NOP16Q9Y3C1 178 aaKnown RBP17.7■□□□□ 0.42
CD44-222ENST00000526025 MAST4O15021 2626 aa17.69■□□□□ 0.42
CD44-222ENST00000526025 GGT3PA6NGU5 568 aa17.69■□□□□ 0.42
CD44-222ENST00000526025 RPP14O95059 124 aaKnown RBP17.69■□□□□ 0.42
CD44-222ENST00000526025 F12P00748 615 aaPredicted RBP17.69■□□□□ 0.42
CD44-222ENST00000526025 IGHV4-39P01824 125 aa17.69■□□□□ 0.42
CD44-222ENST00000526025 TTRP02766 147 aa17.69■□□□□ 0.42
CD44-222ENST00000526025 CD55P08174 381 aa17.69■□□□□ 0.42
CD44-222ENST00000526025 NAT2P11245 290 aa17.69■□□□□ 0.42
CD44-222ENST00000526025 ETV1P50549 477 aa17.69■□□□□ 0.42
CD44-222ENST00000526025 CCR9P51686 369 aa17.69■□□□□ 0.42
CD44-222ENST00000526025 SLC35A2P78381 396 aa17.69■□□□□ 0.42
CD44-222ENST00000526025 Q6ZSR3 168 aa17.69■□□□□ 0.42
CD44-222ENST00000526025 KRT74Q7RTS7 529 aa17.69■□□□□ 0.42
CD44-222ENST00000526025 STX19Q8N4C7 294 aa17.69■□□□□ 0.42
CD44-222ENST00000526025 KLHL36Q8N4N3 616 aa17.69■□□□□ 0.42
CD44-222ENST00000526025 CSNK2A3Q8NEV1 391 aa17.69■□□□□ 0.42
CD44-222ENST00000526025 OR13G1Q8NGZ3 307 aa17.69■□□□□ 0.42
CD44-222ENST00000526025 SPRYD4Q8WW59 207 aaPredicted RBP17.69■□□□□ 0.42
CD44-222ENST00000526025 PERPQ96FX8 193 aa17.69■□□□□ 0.42
CD44-222ENST00000526025 DUSP21Q9H596 190 aa17.69■□□□□ 0.42
CD44-222ENST00000526025 MYOZ1Q9NP98 299 aaPredicted RBP17.69■□□□□ 0.42
CD44-222ENST00000526025 BLOC1S6Q9UL45 172 aa17.69■□□□□ 0.42
CD44-222ENST00000526025 ZSCAN5BA6NJL1 495 aa17.68■□□□□ 0.42
CD44-222ENST00000526025 J3QLW9 94 aa17.68■□□□□ 0.42
CD44-222ENST00000526025 CDK1P06493 297 aa17.68■□□□□ 0.42
CD44-222ENST00000526025 RPSAP08865 295 aaKnown RBP17.68■□□□□ 0.42
CD44-222ENST00000526025 ZNF19P17023 458 aa17.68■□□□□ 0.42
CD44-222ENST00000526025 CCL1P22362 96 aa17.68■□□□□ 0.42
CD44-222ENST00000526025 CRHBPP24387 322 aa17.68■□□□□ 0.42
CD44-222ENST00000526025 TGM4P49221 684 aa17.68■□□□□ 0.42
CD44-222ENST00000526025 GSK3AP49840 483 aa17.68■□□□□ 0.42
CD44-222ENST00000526025 MRPS11P82912 194 aaKnown RBP17.68■□□□□ 0.42
CD44-222ENST00000526025 SHEQ5VZ18 495 aa17.68■□□□□ 0.42
CD44-222ENST00000526025 KLBQ86Z14 1044 aa17.68■□□□□ 0.42
CD44-222ENST00000526025 FTMTQ8N4E7 242 aa17.68■□□□□ 0.42
CD44-222ENST00000526025 PLPP7Q8NBV4 271 aa17.68■□□□□ 0.42
CD44-222ENST00000526025 CCDC54Q8NEL0 328 aa17.68■□□□□ 0.42
CD44-222ENST00000526025 OR2G2Q8NGZ5 317 aa17.68■□□□□ 0.42
CD44-222ENST00000526025 TANC2Q9HCD6 1990 aa17.68■□□□□ 0.42
CD44-222ENST00000526025 DHRS7CA6NNS2 312 aa17.67■□□□□ 0.42
CD44-222ENST00000526025 IGHV1-46P01743 117 aa17.67■□□□□ 0.42
CD44-222ENST00000526025 HTR1AP08908 422 aa17.67■□□□□ 0.42
CD44-222ENST00000526025 UBCP0CG48 685 aaKnown RBP17.67■□□□□ 0.42
CD44-222ENST00000526025 ART1P52961 327 aa17.67■□□□□ 0.42
CD44-222ENST00000526025 CCDC58Q4VC31 144 aa17.67■□□□□ 0.42
CD44-222ENST00000526025 ZBTB37Q5TC79 503 aa17.67■□□□□ 0.42
CD44-222ENST00000526025 Q6ZR03 302 aa17.67■□□□□ 0.42
CD44-222ENST00000526025 PRSS35Q8N3Z0 413 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms