RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 HCAR3P49019 387 aa3.04□□□□□ -1.92
CSDE1-211ENST00000525970 SYNJ2BPP57105 145 aa3.04□□□□□ -1.92
CSDE1-211ENST00000525970 CACNG7P62955 275 aa3.04□□□□□ -1.92
CSDE1-211ENST00000525970 DYNC1I2Q13409 638 aaKnown RBP3.04□□□□□ -1.92
CSDE1-211ENST00000525970 ZNF79Q15937 498 aa3.04□□□□□ -1.92
CSDE1-211ENST00000525970 PIGGQ5H8A4 983 aa3.04□□□□□ -1.92
CSDE1-211ENST00000525970 AVPI1Q5T686 147 aa3.04□□□□□ -1.92
CSDE1-211ENST00000525970 METTL21CQ5VZV1 264 aa3.04□□□□□ -1.92
CSDE1-211ENST00000525970 PDPK2PQ6A1A2 396 aa3.04□□□□□ -1.92
CSDE1-211ENST00000525970 CEMP1Q6PRD7 247 aaPredicted RBP3.04□□□□□ -1.92
CSDE1-211ENST00000525970 C15orf56Q8N910 161 aa3.04□□□□□ -1.92
CSDE1-211ENST00000525970 CDRT4Q8N9R6 151 aa3.04□□□□□ -1.92
CSDE1-211ENST00000525970 OR11H7Q8NGC8 314 aa3.04□□□□□ -1.92
CSDE1-211ENST00000525970 OR10Z1Q8NGY1 313 aa3.04□□□□□ -1.92
CSDE1-211ENST00000525970 BLOC1S5Q8TDH9 187 aa3.04□□□□□ -1.92
CSDE1-211ENST00000525970 DCPSQ96C86 337 aaKnown RBP3.04□□□□□ -1.92
CSDE1-211ENST00000525970 TEAD3Q99594 435 aa3.04□□□□□ -1.92
CSDE1-211ENST00000525970 TSNAXQ99598 290 aaKnown RBP3.04□□□□□ -1.92
CSDE1-211ENST00000525970 NAPGQ99747 312 aaPredicted RBP3.04□□□□□ -1.92
CSDE1-211ENST00000525970 GABRG3Q99928 467 aa3.04□□□□□ -1.92
CSDE1-211ENST00000525970 SAMD10Q9BYL1 202 aa3.04□□□□□ -1.92
CSDE1-211ENST00000525970 GOLPH3Q9H4A6 298 aa3.04□□□□□ -1.92
CSDE1-211ENST00000525970 NANOGQ9H9S0 305 aa3.04□□□□□ -1.92
CSDE1-211ENST00000525970 ACOT9Q9Y305 439 aa3.04□□□□□ -1.92
CSDE1-211ENST00000525970 NOSIPQ9Y314 301 aaKnown RBP3.04□□□□□ -1.92
CSDE1-211ENST00000525970 IGHV2OR16-5A0A0B4J2B6 119 aa3.03□□□□□ -1.92
CSDE1-211ENST00000525970 IGHV3-66A0A0C4DH42 116 aa3.03□□□□□ -1.92
CSDE1-211ENST00000525970 A0A1B0GW15 77 aa3.03□□□□□ -1.92
CSDE1-211ENST00000525970 MGAT4DA6NG13 374 aa3.03□□□□□ -1.92
CSDE1-211ENST00000525970 H0Y9J4 135 aa3.03□□□□□ -1.92
CSDE1-211ENST00000525970 RNASEK-C17orf49H0YIS7 233 aa3.03□□□□□ -1.92
CSDE1-211ENST00000525970 NQO2P16083 231 aa3.03□□□□□ -1.92
CSDE1-211ENST00000525970 ZNF19P17023 458 aa3.03□□□□□ -1.92
CSDE1-211ENST00000525970 ARL2P36404 184 aa3.03□□□□□ -1.92
CSDE1-211ENST00000525970 NDUFA8P51970 172 aa3.03□□□□□ -1.92
CSDE1-211ENST00000525970 C2orf80Q0P641 193 aa3.03□□□□□ -1.92
CSDE1-211ENST00000525970 ST3GAL4Q11206 333 aa3.03□□□□□ -1.92
CSDE1-211ENST00000525970 OR2T5Q6IEZ7 315 aa3.03□□□□□ -1.92
CSDE1-211ENST00000525970 EPGNQ6UW88 154 aa3.03□□□□□ -1.92
CSDE1-211ENST00000525970 NCCRP1Q6ZVX7 275 aaPredicted RBP3.03□□□□□ -1.92
CSDE1-211ENST00000525970 FAM19A1Q7Z5A9 133 aa3.03□□□□□ -1.92
CSDE1-211ENST00000525970 ERO1BQ86YB8 467 aa3.03□□□□□ -1.92
CSDE1-211ENST00000525970 C17orf78Q8N4C9 275 aa3.03□□□□□ -1.92
CSDE1-211ENST00000525970 LINC00469Q8N7U9 141 aa3.03□□□□□ -1.92
CSDE1-211ENST00000525970 OR6K2Q8NGY2 324 aa3.03□□□□□ -1.92
CSDE1-211ENST00000525970 OR2T29Q8NH02 315 aa3.03□□□□□ -1.92
CSDE1-211ENST00000525970 TMEM239Q8WW34 195 aa3.03□□□□□ -1.92
CSDE1-211ENST00000525970 TMEM158Q8WZ71 300 aa3.03□□□□□ -1.92
CSDE1-211ENST00000525970 CCDC124Q96CT7 223 aaKnown RBP3.03□□□□□ -1.92
CSDE1-211ENST00000525970 ZNF414Q96IQ9 312 aa3.03□□□□□ -1.92
CSDE1-211ENST00000525970 FAM210BQ96KR6 192 aa3.03□□□□□ -1.92
CSDE1-211ENST00000525970 SPNS1Q9H2V7 528 aa3.03□□□□□ -1.92
CSDE1-211ENST00000525970 C1orf198Q9H425 327 aa3.03□□□□□ -1.92
CSDE1-211ENST00000525970 EDA2RQ9HAV5 297 aa3.03□□□□□ -1.92
CSDE1-211ENST00000525970 VCX3AQ9NNX9 186 aa3.03□□□□□ -1.92
CSDE1-211ENST00000525970 RRAGDQ9NQL2 400 aaPredicted RBP3.03□□□□□ -1.92
CSDE1-211ENST00000525970 FAM49BQ9NUQ9 324 aa3.03□□□□□ -1.92
CSDE1-211ENST00000525970 VAPAQ9P0L0 249 aa3.03□□□□□ -1.92
CSDE1-211ENST00000525970 CD300AQ9UGN4 299 aa3.03□□□□□ -1.92
CSDE1-211ENST00000525970 SIGLEC9Q9Y336 463 aa3.03□□□□□ -1.92
CSDE1-211ENST00000525970 HYOU1Q9Y4L1 999 aa3.03□□□□□ -1.92
CSDE1-211ENST00000525970 C2orf16Q68DN1 1984 aa3.03□□□□□ -1.92
CSDE1-211ENST00000525970 CCDC180Q9P1Z9 1646 aa3.02□□□□□ -1.93
CSDE1-211ENST00000525970 IGLV11-55A0A075B6I3 123 aa3.02□□□□□ -1.93
CSDE1-211ENST00000525970 TRAV8-7A0A075B6U6 113 aa3.02□□□□□ -1.93
CSDE1-211ENST00000525970 SEC14L6B5MCN3 397 aa3.02□□□□□ -1.93
CSDE1-211ENST00000525970 F8VP50 259 aa3.02□□□□□ -1.93
CSDE1-211ENST00000525970 DNASE2O00115 360 aaPredicted RBP3.02□□□□□ -1.93
CSDE1-211ENST00000525970 HAT1O14929 419 aa3.02□□□□□ -1.93
CSDE1-211ENST00000525970 B4GALT5O43286 388 aa3.02□□□□□ -1.93
CSDE1-211ENST00000525970 RAD1O60671 282 aa3.02□□□□□ -1.93
CSDE1-211ENST00000525970 FADS2O95864 444 aaKnown RBP3.02□□□□□ -1.93
CSDE1-211ENST00000525970 HLA-DPB1P04440 258 aa3.02□□□□□ -1.93
CSDE1-211ENST00000525970 KRTAP1-4P0C5Y4 121 aa3.02□□□□□ -1.93
CSDE1-211ENST00000525970 TCN2P20062 427 aa3.02□□□□□ -1.93
CSDE1-211ENST00000525970 MYL9P24844 172 aa3.02□□□□□ -1.93
CSDE1-211ENST00000525970 HTR1DP28221 377 aa3.02□□□□□ -1.93
CSDE1-211ENST00000525970 P2RY2P41231 377 aa3.02□□□□□ -1.93
CSDE1-211ENST00000525970 RBM34P42696 430 aaKnown RBP3.02□□□□□ -1.93
CSDE1-211ENST00000525970 DNASE1L1P49184 302 aa3.02□□□□□ -1.93
CSDE1-211ENST00000525970 WNT4P56705 351 aa3.02□□□□□ -1.93
CSDE1-211ENST00000525970 UBE2NP61088 152 aaKnown RBP3.02□□□□□ -1.93
CSDE1-211ENST00000525970 LRRC63Q05C16 580 aa3.02□□□□□ -1.93
CSDE1-211ENST00000525970 IFFO1Q0D2I5 559 aa3.02□□□□□ -1.93
CSDE1-211ENST00000525970 OR1Q1Q15612 314 aa3.02□□□□□ -1.93
CSDE1-211ENST00000525970 ZBTB6Q15916 424 aa3.02□□□□□ -1.93
CSDE1-211ENST00000525970 ACTL10Q5JWF8 245 aa3.02□□□□□ -1.93
CSDE1-211ENST00000525970 ZNF470Q6ECI4 717 aa3.02□□□□□ -1.93
CSDE1-211ENST00000525970 ZNF429Q86V71 674 aa3.02□□□□□ -1.93
CSDE1-211ENST00000525970 METTL13Q8N6R0 699 aa3.02□□□□□ -1.93
CSDE1-211ENST00000525970 GPR26Q8NDV2 337 aa3.02□□□□□ -1.93
CSDE1-211ENST00000525970 OR2Y1Q8NGV0 311 aa3.02□□□□□ -1.93
CSDE1-211ENST00000525970 ABHD3Q8WU67 409 aa3.02□□□□□ -1.93
CSDE1-211ENST00000525970 HAUS1Q96CS2 278 aa3.02□□□□□ -1.93
CSDE1-211ENST00000525970 PHYHIPLQ96FC7 376 aa3.02□□□□□ -1.93
CSDE1-211ENST00000525970 TAAR1Q96RJ0 339 aa3.02□□□□□ -1.93
CSDE1-211ENST00000525970 RPP21Q9H633 154 aaKnown RBP3.02□□□□□ -1.93
CSDE1-211ENST00000525970 SLC40A1Q9NP59 571 aa3.02□□□□□ -1.93
CSDE1-211ENST00000525970 OR2S2Q9NQN1 319 aa3.02□□□□□ -1.93
CSDE1-211ENST00000525970 ZNHIT6Q9NWK9 470 aaKnown RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms