RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 KIR3DL2P43630 455 aa10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 RAB1AP62820 205 aa10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 PLAURQ03405 335 aa10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 SMAD4Q13485 552 aaKnown RBP10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 ARHGAP11BQ3KRB8 267 aa10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 ZNF619Q8N2I2 560 aa10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 HSD17B11Q8NBQ5 300 aa10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 RPS4Y2Q8TD47 263 aa10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 LCN9Q8WX39 176 aa10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 ZNF681Q96N22 645 aa10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 LRFN5Q96NI6 719 aa10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 YPEL4Q96NS1 127 aa10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 OR2M4Q96R27 311 aa10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 CDC6Q99741 560 aa10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 PLA2G2FQ9BZM2 168 aa10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 PRDM7Q9NQW5 492 aa10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 SPHK2Q9NRA0 654 aa10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 ADAM29Q9UKF5 820 aa10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 CES1P1Q9UKY3 287 aa10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 RAB22AQ9UL26 194 aa10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 LSM5Q9Y4Y9 91 aaKnown RBP10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 MTCL1Q9Y4B5 1905 aaKnown RBP10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 H3BQ15 152 aa10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 RAB27BO00194 218 aa10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 TMEM127O75204 238 aa10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 FGF7P21781 194 aa10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 CLDN6P56747 220 aa10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 PPA1Q15181 289 aa10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 ZNF77Q15935 545 aa10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 ABHD17CQ6PCB6 329 aa10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 MDGA2Q7Z553 956 aa10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 CACUL1Q86Y37 369 aa10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 ZNF101Q8IZC7 436 aa10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 ZDHHC22Q8N966 263 aa10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 LINC01555Q8NAE3 123 aa10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 OR2I1PQ8NGU4 316 aa10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 FIBINQ8TAL6 211 aa10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 ZCCHC10Q8TBK6 192 aa10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 RAB24Q969Q5 203 aa10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 TMEM208Q9BTX3 173 aa10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 SCRT1Q9BWW7 348 aa10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 SH3BGRL3Q9H299 93 aa10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 KCNK6Q9Y257 313 aa10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 ENTPD2Q9Y5L3 495 aa10.06□□□□□ -0.8
CLNS1A-204ENST00000525428 TMEM212A6NML5 194 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 MKRN2OSH3BPM6 223 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 HSD11B2P80365 405 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 SLC10A1Q14973 349 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 TMEM268Q5VZI3 342 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 C17orf78Q8N4C9 275 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 OR2L2Q8NH16 312 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 ERGIC1Q969X5 290 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 NUDT9Q9BW91 350 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 ADAM19Q9H013 955 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 SLCO5A1Q9H2Y9 848 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 PELI2Q9HAT8 420 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 CACNA1IQ9P0X4 2223 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 CLEC1BQ9P126 229 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 HS3ST2Q9Y278 367 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 A0A0B4J2E0 115 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 A0A1B0GX12 115 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 WIPF3A6NGB9 483 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 C9J4A7 227 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 ABHD16AO95870 558 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 KNG1P01042 644 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 GABRA4P48169 554 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 ASCL1P50553 236 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 TRA2BP62995 288 aaKnown RBP10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 SPEM2Q0P670 501 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 EXOSC7Q15024 291 aaKnown RBP10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 TCEA2Q15560 299 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 ZNF658BQ4V348 819 aaPredicted RBP10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 TMEM128Q5BJH2 165 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 TMEM225Q6GV28 225 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 SLC16A9Q7RTY1 509 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 GPR137CQ8N3F9 429 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 FAM213BQ8TBF2 198 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 CXorf40AQ8TE69 158 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 OR11A1Q9GZK7 315 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 SLC25A31Q9H0C2 315 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 DPEP2Q9H4A9 486 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 DHDHQ9UQ10 334 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 HEATR5AQ86XA9 2040 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 A0A1W2PPV9 198 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 JTBO76095 146 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 PGA3P0DJD8 388 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 ATXN8OSP0DMR3 200 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 SLC2A1P11166 492 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 GABRA3P34903 492 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 EMDP50402 254 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 SCAND1P57086 179 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 DMRTA1Q5VZB9 504 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 PARM1Q6UWI2 310 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 ZNF595Q8IYB9 648 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 TMEFF1Q8IYR6 380 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 LRRC25Q8N386 305 aaPredicted RBP10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 FGF14Q92915 247 aa10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 SLC25A44Q96H78 314 aaPredicted RBP10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 CDCA3Q99618 268 aaPredicted RBP10.05□□□□□ -0.8
CLNS1A-204ENST00000525428 FAM83CQ9BQN1 747 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms