RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 TAF13Q15543 124 aa10.33□□□□□ -0.76
VEGFA-223ENST00000523125 ZNF841Q6ZN19 808 aa10.33□□□□□ -0.76
VEGFA-223ENST00000523125 ERI1Q8IV48 349 aaKnown RBP10.33□□□□□ -0.76
VEGFA-223ENST00000523125 C1orf87Q8N0U7 546 aa10.33□□□□□ -0.76
VEGFA-223ENST00000523125 BPIFB2Q8N4F0 458 aa10.33□□□□□ -0.76
VEGFA-223ENST00000523125 PAPD5Q8NDF8 572 aaKnown RBP10.33□□□□□ -0.76
VEGFA-223ENST00000523125 C19orf18Q8NEA5 215 aa10.33□□□□□ -0.76
VEGFA-223ENST00000523125 OR56B2PQ8NGI1 322 aa10.33□□□□□ -0.76
VEGFA-223ENST00000523125 RNF133Q8WVZ7 376 aa10.33□□□□□ -0.76
VEGFA-223ENST00000523125 SGK3Q96BR1 496 aa10.33□□□□□ -0.76
VEGFA-223ENST00000523125 NEIL1Q96FI4 390 aaPredicted RBP10.33□□□□□ -0.76
VEGFA-223ENST00000523125 INTS14Q96SY0 518 aa10.33□□□□□ -0.76
VEGFA-223ENST00000523125 ADAT1Q9BUB4 502 aaKnown RBP10.33□□□□□ -0.76
VEGFA-223ENST00000523125 SLC22A4Q9H015 551 aa10.33□□□□□ -0.76
VEGFA-223ENST00000523125 MRPL15Q9P015 296 aaKnown RBP10.33□□□□□ -0.76
VEGFA-223ENST00000523125 ZNF319Q9P2F9 582 aa10.33□□□□□ -0.76
VEGFA-223ENST00000523125 ZNF69Q9UC07 566 aa10.33□□□□□ -0.76
VEGFA-223ENST00000523125 OR5V1Q9UGF6 321 aa10.33□□□□□ -0.76
VEGFA-223ENST00000523125 NUP50Q9UKX7 468 aa10.33□□□□□ -0.76
VEGFA-223ENST00000523125 N6AMT1Q9Y5N5 214 aa10.33□□□□□ -0.76
VEGFA-223ENST00000523125 TRIM77I1YAP6 450 aa10.32□□□□□ -0.76
VEGFA-223ENST00000523125 GNGT2O14610 69 aa10.32□□□□□ -0.76
VEGFA-223ENST00000523125 TNFRSF13BO14836 293 aaPredicted RBP10.32□□□□□ -0.76
VEGFA-223ENST00000523125 GYG2O15488 501 aa10.32□□□□□ -0.76
VEGFA-223ENST00000523125 XRCC2O43543 280 aa10.32□□□□□ -0.76
VEGFA-223ENST00000523125 FPR2P25090 351 aa10.32□□□□□ -0.76
VEGFA-223ENST00000523125 PSMB10P40306 273 aa10.32□□□□□ -0.76
VEGFA-223ENST00000523125 SLC15A1P46059 708 aa10.32□□□□□ -0.76
VEGFA-223ENST00000523125 CX3CR1P49238 355 aa10.32□□□□□ -0.76
VEGFA-223ENST00000523125 GNB2P62879 340 aa10.32□□□□□ -0.76
VEGFA-223ENST00000523125 GRB2P62993 217 aaKnown RBP10.32□□□□□ -0.76
VEGFA-223ENST00000523125 FAM3AP98173 230 aa10.32□□□□□ -0.76
VEGFA-223ENST00000523125 KLHL12Q53G59 568 aa10.32□□□□□ -0.76
VEGFA-223ENST00000523125 ARMCX4Q5H9R4 360 aa10.32□□□□□ -0.76
VEGFA-223ENST00000523125 DCDC5Q6ZRR9 648 aa10.32□□□□□ -0.76
VEGFA-223ENST00000523125 RHOUQ7L0Q8 258 aa10.32□□□□□ -0.76
VEGFA-223ENST00000523125 SLC16A9Q7RTY1 509 aa10.32□□□□□ -0.76
VEGFA-223ENST00000523125 BCL6BQ8N143 479 aaPredicted RBP10.32□□□□□ -0.76
VEGFA-223ENST00000523125 PLPP7Q8NBV4 271 aa10.32□□□□□ -0.76
VEGFA-223ENST00000523125 OR11L1Q8NGX0 322 aa10.32□□□□□ -0.76
VEGFA-223ENST00000523125 OR6N2Q8NGY6 317 aa10.32□□□□□ -0.76
VEGFA-223ENST00000523125 BCAS4Q8TDM0 211 aa10.32□□□□□ -0.76
VEGFA-223ENST00000523125 RAB40AQ8WXH6 277 aa10.32□□□□□ -0.76
VEGFA-223ENST00000523125 OTULINQ96BN8 352 aa10.32□□□□□ -0.76
VEGFA-223ENST00000523125 ZMYND19Q96E35 227 aaPredicted RBP10.32□□□□□ -0.76
VEGFA-223ENST00000523125 MRI1Q9BV20 369 aa10.32□□□□□ -0.76
VEGFA-223ENST00000523125 OR51V1Q9H2C8 321 aa10.32□□□□□ -0.76
VEGFA-223ENST00000523125 TOR3AQ9H497 397 aa10.32□□□□□ -0.76
VEGFA-223ENST00000523125 NTN4Q9HB63 628 aa10.32□□□□□ -0.76
VEGFA-223ENST00000523125 RNF7Q9UBF6 113 aa10.32□□□□□ -0.76
VEGFA-223ENST00000523125 POMPQ9Y244 141 aa10.32□□□□□ -0.76
VEGFA-223ENST00000523125 NOP16Q9Y3C1 178 aaKnown RBP10.32□□□□□ -0.76
VEGFA-223ENST00000523125 IGHV2-70DA0A0C4DH43 119 aa10.31□□□□□ -0.76
VEGFA-223ENST00000523125 KIR2DS1A0A191URI9 304 aa10.31□□□□□ -0.76
VEGFA-223ENST00000523125 TMEM89A2RUT3 159 aa10.31□□□□□ -0.76
VEGFA-223ENST00000523125 SELENOFO60613 162 aa10.31□□□□□ -0.76
VEGFA-223ENST00000523125 FKBP6O75344 327 aa10.31□□□□□ -0.76
VEGFA-223ENST00000523125 PPIAL4GP0DN37 164 aa10.31□□□□□ -0.76
VEGFA-223ENST00000523125 OSMP13725 252 aa10.31□□□□□ -0.76
VEGFA-223ENST00000523125 IRF2P14316 349 aa10.31□□□□□ -0.76
VEGFA-223ENST00000523125 HOXB6P17509 224 aaKnown RBP10.31□□□□□ -0.76
VEGFA-223ENST00000523125 POU1F1P28069 291 aa10.31□□□□□ -0.76
VEGFA-223ENST00000523125 OPRL1P41146 370 aa10.31□□□□□ -0.76
VEGFA-223ENST00000523125 PITPNBP48739 271 aa10.31□□□□□ -0.76
VEGFA-223ENST00000523125 COMPP49747 757 aaPredicted RBP10.31□□□□□ -0.76
VEGFA-223ENST00000523125 ZNF121P58317 390 aaPredicted RBP10.31□□□□□ -0.76
VEGFA-223ENST00000523125 CBX1P83916 185 aa10.31□□□□□ -0.76
VEGFA-223ENST00000523125 FLOT2Q14254 428 aa10.31□□□□□ -0.76
VEGFA-223ENST00000523125 DNAL1Q4LDG9 190 aa10.31□□□□□ -0.76
VEGFA-223ENST00000523125 WDR25Q64LD2 544 aaPredicted RBP10.31□□□□□ -0.76
VEGFA-223ENST00000523125 PLBD1Q6P4A8 553 aa10.31□□□□□ -0.76
VEGFA-223ENST00000523125 ZNF826PQ6ZT77 177 aa10.31□□□□□ -0.76
VEGFA-223ENST00000523125 DOK3Q7L591 496 aa10.31□□□□□ -0.76
VEGFA-223ENST00000523125 WDR86Q86TI4 376 aa10.31□□□□□ -0.76
VEGFA-223ENST00000523125 SPATA24Q86W54 205 aa10.31□□□□□ -0.76
VEGFA-223ENST00000523125 C11orf53Q8IXP5 236 aa10.31□□□□□ -0.76
VEGFA-223ENST00000523125 SIGLECL1Q8N7X8 197 aa10.31□□□□□ -0.76
VEGFA-223ENST00000523125 OR8B3Q8NGG8 313 aa10.31□□□□□ -0.76
VEGFA-223ENST00000523125 PLEKHA8Q96JA3 519 aa10.31□□□□□ -0.76
VEGFA-223ENST00000523125 ZNF48Q96MX3 618 aaPredicted RBP10.31□□□□□ -0.76
VEGFA-223ENST00000523125 OR8B2Q96RD0 313 aa10.31□□□□□ -0.76
VEGFA-223ENST00000523125 JMJD8Q96S16 334 aa10.31□□□□□ -0.76
VEGFA-223ENST00000523125 OPA3Q9H6K4 179 aa10.31□□□□□ -0.76
VEGFA-223ENST00000523125 PPP1R3EQ9H7J1 279 aa10.31□□□□□ -0.76
VEGFA-223ENST00000523125 FN3KRPQ9HA64 309 aa10.31□□□□□ -0.76
VEGFA-223ENST00000523125 CTSZQ9UBR2 303 aa10.31□□□□□ -0.76
VEGFA-223ENST00000523125 DNAJB9Q9UBS3 223 aa10.31□□□□□ -0.76
VEGFA-223ENST00000523125 KLHDC2Q9Y2U9 406 aa10.31□□□□□ -0.76
VEGFA-223ENST00000523125 hCG_38984A0A1B0GV85 526 aa10.3□□□□□ -0.76
VEGFA-223ENST00000523125 PRR23D1E9PI22 279 aaPredicted RBP10.3□□□□□ -0.76
VEGFA-223ENST00000523125 PRODHO43272 600 aa10.3□□□□□ -0.76
VEGFA-223ENST00000523125 TBX1O43435 398 aa10.3□□□□□ -0.76
VEGFA-223ENST00000523125 E2F6O75461 281 aa10.3□□□□□ -0.76
VEGFA-223ENST00000523125 FCN3O75636 299 aa10.3□□□□□ -0.76
VEGFA-223ENST00000523125 DNAJC8O75937 253 aaPredicted RBP10.3□□□□□ -0.76
VEGFA-223ENST00000523125 LHBP01229 141 aa10.3□□□□□ -0.76
VEGFA-223ENST00000523125 HMGN1P05114 100 aa10.3□□□□□ -0.76
VEGFA-223ENST00000523125 ANXA2P07355 339 aaKnown RBP10.3□□□□□ -0.76
VEGFA-223ENST00000523125 GRPP07492 148 aa10.3□□□□□ -0.76
VEGFA-223ENST00000523125 PRR23D2P0DMB1 279 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms