RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 SPAG4Q9NPE6 437 aa12.78□□□□□ -0.36
MRPS28-209ENST00000522987 CENPMQ9NSP4 180 aa12.78□□□□□ -0.36
MRPS28-209ENST00000522987 DUX4Q9UBX2 424 aa12.78□□□□□ -0.36
MRPS28-209ENST00000522987 VWFP04275 2813 aa12.77□□□□□ -0.36
MRPS28-209ENST00000522987 P2RY10O00398 339 aa12.77□□□□□ -0.37
MRPS28-209ENST00000522987 NDUFAB1O14561 156 aa12.77□□□□□ -0.37
MRPS28-209ENST00000522987 TBX1O43435 398 aa12.77□□□□□ -0.37
MRPS28-209ENST00000522987 IGHV4-59P01825 116 aa12.77□□□□□ -0.37
MRPS28-209ENST00000522987 SEMG1P04279 462 aa12.77□□□□□ -0.37
MRPS28-209ENST00000522987 MMP9P14780 707 aa12.77□□□□□ -0.37
MRPS28-209ENST00000522987 CPT2P23786 658 aa12.77□□□□□ -0.37
MRPS28-209ENST00000522987 GSSP48637 474 aa12.77□□□□□ -0.37
MRPS28-209ENST00000522987 DLX1P56177 255 aa12.77□□□□□ -0.37
MRPS28-209ENST00000522987 SMIM11AP58511 58 aa12.77□□□□□ -0.37
MRPS28-209ENST00000522987 GMFBP60983 142 aa12.77□□□□□ -0.37
MRPS28-209ENST00000522987 METTL11BQ5VVY1 283 aa12.77□□□□□ -0.37
MRPS28-209ENST00000522987 OLFML2AQ68BL7 652 aa12.77□□□□□ -0.37
MRPS28-209ENST00000522987 PGBD2Q6P3X8 592 aa12.77□□□□□ -0.37
MRPS28-209ENST00000522987 ZNF620Q6ZNG0 422 aa12.77□□□□□ -0.37
MRPS28-209ENST00000522987 FAM90A1Q86YD7 464 aa12.77□□□□□ -0.37
MRPS28-209ENST00000522987 CELF2-AS1Q8N7Q2 184 aa12.77□□□□□ -0.37
MRPS28-209ENST00000522987 ZNF511Q8NB15 262 aa12.77□□□□□ -0.37
MRPS28-209ENST00000522987 SCCPDHQ8NBX0 429 aa12.77□□□□□ -0.37
MRPS28-209ENST00000522987 OR4F5Q8NH21 305 aa12.77□□□□□ -0.37
MRPS28-209ENST00000522987 GNPDA2Q8TDQ7 276 aa12.77□□□□□ -0.37
MRPS28-209ENST00000522987 ST8SIA4Q92187 359 aa12.77□□□□□ -0.37
MRPS28-209ENST00000522987 SEH1LQ96EE3 360 aa12.77□□□□□ -0.37
MRPS28-209ENST00000522987 PPP1R3EQ9H7J1 279 aa12.77□□□□□ -0.37
MRPS28-209ENST00000522987 KIF17Q9P2E2 1029 aa12.77□□□□□ -0.37
MRPS28-209ENST00000522987 A0A0U1RQK1 487 aa12.76□□□□□ -0.37
MRPS28-209ENST00000522987 A0A1W2PRD5 423 aa12.76□□□□□ -0.37
MRPS28-209ENST00000522987 A0A1W2PRF3 423 aa12.76□□□□□ -0.37
MRPS28-209ENST00000522987 A0A1W2PRM7 423 aa12.76□□□□□ -0.37
MRPS28-209ENST00000522987 OOEPA6NGQ2 149 aa12.76□□□□□ -0.37
MRPS28-209ENST00000522987 DVL1O14640 695 aa12.76□□□□□ -0.37
MRPS28-209ENST00000522987 FABP3P05413 133 aa12.76□□□□□ -0.37
MRPS28-209ENST00000522987 TAF13Q15543 124 aa12.76□□□□□ -0.37
MRPS28-209ENST00000522987 CD276Q5ZPR3 534 aa12.76□□□□□ -0.37
MRPS28-209ENST00000522987 BTN2A1Q7KYR7 527 aa12.76□□□□□ -0.37
MRPS28-209ENST00000522987 GCSAMQ8N6F7 178 aa12.76□□□□□ -0.37
MRPS28-209ENST00000522987 OR8D4Q8NGM9 314 aa12.76□□□□□ -0.37
MRPS28-209ENST00000522987 GATAD2BQ8WXI9 593 aa12.76□□□□□ -0.37
MRPS28-209ENST00000522987 ERGIC1Q969X5 290 aa12.76□□□□□ -0.37
MRPS28-209ENST00000522987 MCUR1Q96AQ8 359 aa12.76□□□□□ -0.37
MRPS28-209ENST00000522987 CMTM5Q96DZ9 223 aa12.76□□□□□ -0.37
MRPS28-209ENST00000522987 SIRPDQ9H106 197 aa12.76□□□□□ -0.37
MRPS28-209ENST00000522987 MYLK2Q9H1R3 596 aa12.76□□□□□ -0.37
MRPS28-209ENST00000522987 PRDM13Q9H4Q3 707 aa12.76□□□□□ -0.37
MRPS28-209ENST00000522987 NOX4Q9NPH5 578 aa12.76□□□□□ -0.37
MRPS28-209ENST00000522987 ACOXLQ9NUZ1 547 aa12.76□□□□□ -0.37
MRPS28-209ENST00000522987 MMP24Q9Y5R2 645 aa12.76□□□□□ -0.37
MRPS28-209ENST00000522987 COMMD3-BMI1R4GMX3 469 aa12.76□□□□□ -0.37
MRPS28-209ENST00000522987 TRAV38-1A0A0B4J264 116 aa12.75□□□□□ -0.37
MRPS28-209ENST00000522987 IGHV1-69DA0A0B4J2H0 117 aa12.75□□□□□ -0.37
MRPS28-209ENST00000522987 TNFRSF13BO14836 293 aaPredicted RBP12.75□□□□□ -0.37
MRPS28-209ENST00000522987 ARPC2O15144 300 aa12.75□□□□□ -0.37
MRPS28-209ENST00000522987 GPR137BO60478 399 aa12.75□□□□□ -0.37
MRPS28-209ENST00000522987 GMDSO60547 372 aa12.75□□□□□ -0.37
MRPS28-209ENST00000522987 FSTL3O95633 263 aa12.75□□□□□ -0.37
MRPS28-209ENST00000522987 IGHV1-69P01742 117 aa12.75□□□□□ -0.37
MRPS28-209ENST00000522987 TFF1P04155 84 aa12.75□□□□□ -0.37
MRPS28-209ENST00000522987 CLUP10909 449 aa12.75□□□□□ -0.37
MRPS28-209ENST00000522987 NPY4RP50391 375 aa12.75□□□□□ -0.37
MRPS28-209ENST00000522987 CSNK2BP67870 215 aa12.75□□□□□ -0.37
MRPS28-209ENST00000522987 TSPAN31Q12999 210 aa12.75□□□□□ -0.37
MRPS28-209ENST00000522987 GFOD2Q3B7J2 385 aa12.75□□□□□ -0.37
MRPS28-209ENST00000522987 WDR86Q86TI4 376 aa12.75□□□□□ -0.37
MRPS28-209ENST00000522987 ZDHHC21Q8IVQ6 265 aa12.75□□□□□ -0.37
MRPS28-209ENST00000522987 SLC37A3Q8NCC5 494 aa12.75□□□□□ -0.37
MRPS28-209ENST00000522987 OR52L1Q8NGH7 329 aa12.75□□□□□ -0.37
MRPS28-209ENST00000522987 SLAMF6Q96DU3 332 aa12.75□□□□□ -0.37
MRPS28-209ENST00000522987 NSMCE2Q96MF7 247 aa12.75□□□□□ -0.37
MRPS28-209ENST00000522987 CCL13Q99616 98 aa12.75□□□□□ -0.37
MRPS28-209ENST00000522987 GORASP2Q9H8Y8 452 aa12.75□□□□□ -0.37
MRPS28-209ENST00000522987 TBC1D23Q9NUY8 699 aa12.75□□□□□ -0.37
MRPS28-209ENST00000522987 ONECUT1Q9UBC0 465 aa12.75□□□□□ -0.37
MRPS28-209ENST00000522987 NOTCH1P46531 2555 aa12.75□□□□□ -0.37
MRPS28-209ENST00000522987 CLPSL1A2RUU4 121 aa12.74□□□□□ -0.37
MRPS28-209ENST00000522987 BHLHE40O14503 412 aa12.74□□□□□ -0.37
MRPS28-209ENST00000522987 IDH3BO43837 385 aa12.74□□□□□ -0.37
MRPS28-209ENST00000522987 SOX14O95416 240 aa12.74□□□□□ -0.37
MRPS28-209ENST00000522987 IFNGR2P38484 337 aa12.74□□□□□ -0.37
MRPS28-209ENST00000522987 CRMP1Q14194 572 aa12.74□□□□□ -0.37
MRPS28-209ENST00000522987 KCNJ8Q15842 424 aa12.74□□□□□ -0.37
MRPS28-209ENST00000522987 DRAM2Q6UX65 266 aa12.74□□□□□ -0.37
MRPS28-209ENST00000522987 RHOUQ7L0Q8 258 aa12.74□□□□□ -0.37
MRPS28-209ENST00000522987 VMO1Q7Z5L0 202 aa12.74□□□□□ -0.37
MRPS28-209ENST00000522987 C1QL4Q86Z23 238 aa12.74□□□□□ -0.37
MRPS28-209ENST00000522987 PNLDC1Q8NA58 520 aaKnown RBP12.74□□□□□ -0.37
MRPS28-209ENST00000522987 OR5T2Q8NGG2 359 aa12.74□□□□□ -0.37
MRPS28-209ENST00000522987 OR6K6Q8NGW6 343 aa12.74□□□□□ -0.37
MRPS28-209ENST00000522987 OR2T4Q8NH00 348 aa12.74□□□□□ -0.37
MRPS28-209ENST00000522987 OR8S1Q8NH09 359 aa12.74□□□□□ -0.37
MRPS28-209ENST00000522987 LRRC29Q8WV35 223 aa12.74□□□□□ -0.37
MRPS28-209ENST00000522987 FAM71F1Q96KD3 344 aaPredicted RBP12.74□□□□□ -0.37
MRPS28-209ENST00000522987 BTBD10Q9BSF8 475 aa12.74□□□□□ -0.37
MRPS28-209ENST00000522987 SLC22A4Q9H015 551 aa12.74□□□□□ -0.37
MRPS28-209ENST00000522987 BRD7Q9NPI1 651 aa12.74□□□□□ -0.37
MRPS28-209ENST00000522987 SIRT7Q9NRC8 400 aa12.74□□□□□ -0.37
MRPS28-209ENST00000522987 DNAJC27Q9NZQ0 273 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms