RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 REEP6Q96HR9 211 aa15.05■□□□□ -0
CLK4-211ENST00000522556 LYZL4Q96KX0 146 aa15.05■□□□□ -0
CLK4-211ENST00000522556 PRRG3Q9BZD7 231 aa15.05■□□□□ -0
CLK4-211ENST00000522556 YIPF3Q9GZM5 350 aa15.05■□□□□ -0
CLK4-211ENST00000522556 TOR3AQ9H497 397 aa15.05■□□□□ -0
CLK4-211ENST00000522556 TMEM100Q9NV29 134 aa15.05■□□□□ -0
CLK4-211ENST00000522556 PPP1R3CQ9UQK1 317 aa15.05■□□□□ -0
CLK4-211ENST00000522556 CYB5R3P00387 301 aaPredicted RBP15.04■□□□□ -0
CLK4-211ENST00000522556 IGHV2-70P01814 119 aa15.04■□□□□ -0
CLK4-211ENST00000522556 IGHV2-5P01817 119 aa15.04■□□□□ -0
CLK4-211ENST00000522556 ALDH3A2P51648 485 aa15.04■□□□□ -0
CLK4-211ENST00000522556 PSMA6P60900 246 aaKnown RBP15.04■□□□□ -0
CLK4-211ENST00000522556 MFGE8Q08431 387 aaPredicted RBP15.04■□□□□ -0
CLK4-211ENST00000522556 ZMYND11Q15326 602 aa15.04■□□□□ -0
CLK4-211ENST00000522556 MPPED2Q15777 294 aa15.04■□□□□ -0
CLK4-211ENST00000522556 TIGD6Q17RP2 521 aa15.04■□□□□ -0
CLK4-211ENST00000522556 PLEKHG7Q6ZR37 379 aa15.04■□□□□ -0
CLK4-211ENST00000522556 KRT77Q7Z794 578 aa15.04■□□□□ -0
CLK4-211ENST00000522556 LINC01356Q8N9X3 169 aa15.04■□□□□ -0
CLK4-211ENST00000522556 FAM81AQ8TBF8 368 aa15.04■□□□□ -0
CLK4-211ENST00000522556 PPP1R14AQ96A00 147 aa15.04■□□□□ -0
CLK4-211ENST00000522556 PGAM5Q96HS1 289 aa15.04■□□□□ -0
CLK4-211ENST00000522556 TBX5Q99593 518 aa15.04■□□□□ -0
CLK4-211ENST00000522556 ADAT1Q9BUB4 502 aaKnown RBP15.04■□□□□ -0
CLK4-211ENST00000522556 ZNF665Q9H7R5 613 aa15.04■□□□□ -0
CLK4-211ENST00000522556 ENOPH1Q9UHY7 261 aa15.04■□□□□ -0
CLK4-211ENST00000522556 KCNS2Q9ULS6 477 aa15.04■□□□□ -0
CLK4-211ENST00000522556 NPTNQ9Y639 398 aa15.04■□□□□ -0
CLK4-211ENST00000522556 XRCC2O43543 280 aa15.03■□□□□ -0
CLK4-211ENST00000522556 TNFRSF1AP19438 455 aa15.03■□□□□ -0
CLK4-211ENST00000522556 RAD23AP54725 363 aa15.03■□□□□ -0
CLK4-211ENST00000522556 CXCR4P61073 352 aa15.03■□□□□ -0
CLK4-211ENST00000522556 SLC35F2Q8IXU6 374 aa15.03■□□□□ -0
CLK4-211ENST00000522556 C19orf18Q8NEA5 215 aa15.03■□□□□ -0
CLK4-211ENST00000522556 OR51G2Q8NGK0 314 aa15.03■□□□□ -0
CLK4-211ENST00000522556 EME1Q96AY2 570 aa15.03■□□□□ -0
CLK4-211ENST00000522556 OR8B4Q96RC9 309 aa15.03■□□□□ -0
CLK4-211ENST00000522556 GAL3ST1Q99999 423 aa15.03■□□□□ -0
CLK4-211ENST00000522556 APOL4Q9BPW4 351 aa15.03■□□□□ -0
CLK4-211ENST00000522556 UFSP2Q9NUQ7 469 aa15.03■□□□□ -0
CLK4-211ENST00000522556 FAM206AQ9NX38 181 aa15.03■□□□□ -0
CLK4-211ENST00000522556 UBAP1Q9NZ09 502 aa15.03■□□□□ -0
CLK4-211ENST00000522556 SLC22A31A6NKX4 558 aa15.02■□□□□ -0
CLK4-211ENST00000522556 KIAA1324LA8MWY0 1029 aaPredicted RBP15.02■□□□□ -0
CLK4-211ENST00000522556 TMEM178BH3BS89 294 aa15.02■□□□□ -0
CLK4-211ENST00000522556 BAG2O95816 211 aa15.02■□□□□ -0
CLK4-211ENST00000522556 PNPP00491 289 aa15.02■□□□□ -0
CLK4-211ENST00000522556 SBK2P0C263 348 aa15.02■□□□□ -0
CLK4-211ENST00000522556 ACKR3P25106 362 aa15.02■□□□□ -0
CLK4-211ENST00000522556 GSK3AP49840 483 aa15.02■□□□□ -0
CLK4-211ENST00000522556 SEC61A1P61619 476 aaKnown RBP15.02■□□□□ -0
CLK4-211ENST00000522556 OR8G1Q15617 311 aa15.02■□□□□ -0
CLK4-211ENST00000522556 CR1LQ2VPA4 569 aa15.02■□□□□ -0
CLK4-211ENST00000522556 RHOUQ7L0Q8 258 aa15.02■□□□□ -0
CLK4-211ENST00000522556 WDR86Q86TI4 376 aa15.02■□□□□ -0
CLK4-211ENST00000522556 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.02■□□□□ -0
CLK4-211ENST00000522556 GID4Q8IVV7 300 aa15.02■□□□□ -0
CLK4-211ENST00000522556 RAB1CQ92928 201 aa15.02■□□□□ -0
CLK4-211ENST00000522556 TIMD4Q96H15 378 aa15.02■□□□□ -0
CLK4-211ENST00000522556 HRASLS5Q96KN8 279 aa15.02■□□□□ -0
CLK4-211ENST00000522556 OR10A2Q9H208 303 aa15.02■□□□□ -0
CLK4-211ENST00000522556 FAM20BO75063 409 aa15.01□□□□□ -0.01
CLK4-211ENST00000522556 SRSF10O75494 262 aaKnown RBP15.01□□□□□ -0.01
CLK4-211ENST00000522556 CD200P41217 278 aa15.01□□□□□ -0.01
CLK4-211ENST00000522556 SRP9P49458 86 aaKnown RBP15.01□□□□□ -0.01
CLK4-211ENST00000522556 BTG1P62324 171 aa15.01□□□□□ -0.01
CLK4-211ENST00000522556 ROM1Q03395 351 aa15.01□□□□□ -0.01
CLK4-211ENST00000522556 FAM120AOSQ5T036 256 aa15.01□□□□□ -0.01
CLK4-211ENST00000522556 OR8J1Q8NGP2 316 aa15.01□□□□□ -0.01
CLK4-211ENST00000522556 FGF23Q9GZV9 251 aaPredicted RBP15.01□□□□□ -0.01
CLK4-211ENST00000522556 H2AFY2Q9P0M6 372 aaPredicted RBP15.01□□□□□ -0.01
CLK4-211ENST00000522556 IKZF2Q9UKS7 526 aa15.01□□□□□ -0.01
CLK4-211ENST00000522556 RHBDD3Q9Y3P4 386 aa15.01□□□□□ -0.01
CLK4-211ENST00000522556 CUBNO60494 3623 aa15.01□□□□□ -0.01
CLK4-211ENST00000522556 C3orf80F5H4A9 247 aa15□□□□□ -0.01
CLK4-211ENST00000522556 MSMBP08118 114 aa15□□□□□ -0.01
CLK4-211ENST00000522556 HTR1FP30939 366 aa15□□□□□ -0.01
CLK4-211ENST00000522556 GATA4P43694 442 aa15□□□□□ -0.01
CLK4-211ENST00000522556 SLC3A1Q07837 685 aa15□□□□□ -0.01
CLK4-211ENST00000522556 CHRFAM7AQ494W8 412 aa15□□□□□ -0.01
CLK4-211ENST00000522556 ZNF322Q6U7Q0 402 aaPredicted RBP15□□□□□ -0.01
CLK4-211ENST00000522556 ZNF826PQ6ZT77 177 aa15□□□□□ -0.01
CLK4-211ENST00000522556 ZNF679Q8IYX0 411 aa15□□□□□ -0.01
CLK4-211ENST00000522556 OR52H1Q8NGJ2 320 aa15□□□□□ -0.01
CLK4-211ENST00000522556 C9orf16Q9BUW7 83 aa15□□□□□ -0.01
CLK4-211ENST00000522556 CLN6Q9NWW5 311 aa15□□□□□ -0.01
CLK4-211ENST00000522556 HAO2Q9NYQ3 351 aa15□□□□□ -0.01
CLK4-211ENST00000522556 MRPL15Q9P015 296 aaKnown RBP15□□□□□ -0.01
CLK4-211ENST00000522556 MRM2Q9UI43 246 aaKnown RBP15□□□□□ -0.01
CLK4-211ENST00000522556 JMJD1CQ15652 2540 aa15□□□□□ -0.01
CLK4-211ENST00000522556 B4DSR2 109 aa14.99□□□□□ -0.01
CLK4-211ENST00000522556 DLGAP1O14490 977 aa14.99□□□□□ -0.01
CLK4-211ENST00000522556 PLPP2O43688 288 aa14.99□□□□□ -0.01
CLK4-211ENST00000522556 ENTPD6O75354 484 aa14.99□□□□□ -0.01
CLK4-211ENST00000522556 APOC1P02654 83 aa14.99□□□□□ -0.01
CLK4-211ENST00000522556 DVL1P1P54792 670 aaPredicted RBP14.99□□□□□ -0.01
CLK4-211ENST00000522556 CDC42P60953 191 aa14.99□□□□□ -0.01
CLK4-211ENST00000522556 OR8B8Q15620 311 aa14.99□□□□□ -0.01
CLK4-211ENST00000522556 DMRTC1Q5HYR2 192 aa14.99□□□□□ -0.01
CLK4-211ENST00000522556 ZBTB49Q6ZSB9 765 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms