RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 SF3B6Q9Y3B4 125 aaKnown RBP12.45□□□□□ -0.42
SYNPO-205ENST00000522122 LRP5LA4QPB2 252 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 AQP8O94778 261 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 NTN1O95631 604 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 RPA2P15927 270 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 RPL12P30050 165 aaKnown RBP12.44□□□□□ -0.42
SYNPO-205ENST00000522122 MAGEB1P43366 347 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 FLI1Q01543 452 aaPredicted RBP12.44□□□□□ -0.42
SYNPO-205ENST00000522122 FAM74A1Q5RGS3 127 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 SYT13Q7L8C5 426 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 VN1R4Q7Z5H5 301 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 DTWD2Q8NBA8 298 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 GPR160Q9UJ42 338 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 SLCO1B1Q9Y6L6 691 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 A0A1W2PPV9 198 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 OR6C68A6NDL8 312 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 HSD17B6O14756 317 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 OGG1O15527 345 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 LANCL1O43813 399 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 OR5H8P0DN80 308 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 ADRA2CP18825 462 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 RNF4P78317 190 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 LSM11P83369 360 aaKnown RBP eCLIP12.44□□□□□ -0.42
SYNPO-205ENST00000522122 KLF9Q13886 244 aaPredicted RBP12.44□□□□□ -0.42
SYNPO-205ENST00000522122 TESK1Q15569 626 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 ZNF626Q68DY1 528 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 FER1L6-AS2Q96M78 137 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 FBXO34Q9NWN3 711 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 DNAJB12Q9NXW2 375 aaKnown RBP12.44□□□□□ -0.42
SYNPO-205ENST00000522122 CPN1P15169 458 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 GLB1P16278 677 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 SELENOPP49908 381 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 ARHGEF39Q8N4T4 335 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 GPR119Q8TDV5 335 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 C2orf50Q96LR7 162 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 PLEKHA2Q9HB19 425 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 GFOD1Q9NXC2 390 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 B3GAT1Q9P2W7 334 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 GHRLQ9UBU3 117 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 ANKRD20A5PA0PJZ0 165 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 KLRC4-KLRK1H3BQV0 150 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 LGALS8O00214 317 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 OR2J2O76002 312 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 ZGLP1P0C6A0 271 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 HOXB3P14651 431 aaPredicted RBP12.44□□□□□ -0.42
SYNPO-205ENST00000522122 SUMO3P55854 103 aaPredicted RBP12.44□□□□□ -0.42
SYNPO-205ENST00000522122 KMT5CQ86Y97 462 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 BATF2Q8N1L9 274 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 OR10J5Q8NHC4 309 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 C20orf24Q9BUV8 137 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 NUDT9Q9BW91 350 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 TUBG2Q9NRH3 451 aa12.44□□□□□ -0.42
SYNPO-205ENST00000522122 NXPH3O95157 252 aa12.43□□□□□ -0.42
SYNPO-205ENST00000522122 PRICKLE4Q2TBC4 344 aa12.43□□□□□ -0.42
SYNPO-205ENST00000522122 Q6ZRG5 221 aa12.43□□□□□ -0.42
SYNPO-205ENST00000522122 PRSS41Q7RTY9 318 aa12.43□□□□□ -0.42
SYNPO-205ENST00000522122 MTFP1Q9UDX5 166 aa12.43□□□□□ -0.42
SYNPO-205ENST00000522122 LRP12Q9Y561 859 aa12.43□□□□□ -0.42
SYNPO-205ENST00000522122 LMO7DNF2Z398 122 aa12.43□□□□□ -0.42
SYNPO-205ENST00000522122 DEGS1O15121 323 aa12.43□□□□□ -0.42
SYNPO-205ENST00000522122 NME2P1O60361 137 aa12.43□□□□□ -0.42
SYNPO-205ENST00000522122 RRASP10301 218 aa12.43□□□□□ -0.42
SYNPO-205ENST00000522122 CXCL3P19876 107 aa12.43□□□□□ -0.42
SYNPO-205ENST00000522122 SCAND1P57086 179 aa12.43□□□□□ -0.42
SYNPO-205ENST00000522122 BORCS7Q96B45 105 aa12.43□□□□□ -0.42
SYNPO-205ENST00000522122 C4orf45Q96LM5 186 aa12.43□□□□□ -0.42
SYNPO-205ENST00000522122 UHRF2Q96PU4 802 aa12.43□□□□□ -0.42
SYNPO-205ENST00000522122 PHF7Q9BWX1 381 aaPredicted RBP12.43□□□□□ -0.42
SYNPO-205ENST00000522122 SCN10AQ9Y5Y9 1956 aa12.43□□□□□ -0.42
SYNPO-205ENST00000522122 ZFP92A6NM28 416 aa12.43□□□□□ -0.42
SYNPO-205ENST00000522122 NRASP01111 189 aa12.43□□□□□ -0.42
SYNPO-205ENST00000522122 EDN3P14138 238 aa12.43□□□□□ -0.42
SYNPO-205ENST00000522122 DEFA6Q01524 100 aa12.43□□□□□ -0.42
SYNPO-205ENST00000522122 FOXF1Q12946 379 aa12.43□□□□□ -0.42
SYNPO-205ENST00000522122 HLXQ14774 488 aaPredicted RBP12.43□□□□□ -0.42
SYNPO-205ENST00000522122 WDR38Q5JTN6 314 aa12.43□□□□□ -0.42
SYNPO-205ENST00000522122 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.43□□□□□ -0.42
SYNPO-205ENST00000522122 ABI3BPQ7Z7G0 1075 aa12.43□□□□□ -0.42
SYNPO-205ENST00000522122 LSMEM1Q8N8F7 131 aa12.43□□□□□ -0.42
SYNPO-205ENST00000522122 BTF3L4Q96K17 158 aa12.43□□□□□ -0.42
SYNPO-205ENST00000522122 TINAGL1Q9GZM7 467 aaPredicted RBP12.43□□□□□ -0.42
SYNPO-205ENST00000522122 PLK3Q9H4B4 646 aa12.43□□□□□ -0.42
SYNPO-205ENST00000522122 TMEM231Q9H6L2 316 aa12.43□□□□□ -0.42
SYNPO-205ENST00000522122 ZNF275Q9NSD4 429 aaPredicted RBP12.43□□□□□ -0.42
SYNPO-205ENST00000522122 DHHO43323 396 aa12.43□□□□□ -0.42
SYNPO-205ENST00000522122 GABRG2P18507 467 aa12.43□□□□□ -0.42
SYNPO-205ENST00000522122 ZNF121P58317 390 aaPredicted RBP12.43□□□□□ -0.42
SYNPO-205ENST00000522122 ARSJQ5FYB0 599 aaPredicted RBP12.43□□□□□ -0.42
SYNPO-205ENST00000522122 ZNF687Q8N1G0 1237 aa12.43□□□□□ -0.42
SYNPO-205ENST00000522122 OR4A16Q8NH70 328 aa12.43□□□□□ -0.42
SYNPO-205ENST00000522122 LIN37Q96GY3 246 aaPredicted RBP12.43□□□□□ -0.42
SYNPO-205ENST00000522122 HDGFL3Q9Y3E1 203 aa12.43□□□□□ -0.42
SYNPO-205ENST00000522122 MYLKQ15746 1914 aa12.43□□□□□ -0.42
SYNPO-205ENST00000522122 RFPL4AA6NLU0 287 aa12.42□□□□□ -0.42
SYNPO-205ENST00000522122 ZNF724A8MTY0 619 aa12.42□□□□□ -0.42
SYNPO-205ENST00000522122 E5RGE8 158 aa12.42□□□□□ -0.42
SYNPO-205ENST00000522122 RFPL4AL1F8VTS6 287 aa12.42□□□□□ -0.42
SYNPO-205ENST00000522122 PPP1R2P9O14990 202 aa12.42□□□□□ -0.42
SYNPO-205ENST00000522122 EFSO43281 561 aa12.42□□□□□ -0.42
SYNPO-205ENST00000522122 DRD3P35462 400 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms