RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 MRPL15Q9P015 296 aaKnown RBP17.41■□□□□ 0.38
TRIM35-203ENST00000521253 COPS3Q9UNS2 423 aa17.41■□□□□ 0.38
TRIM35-203ENST00000521253 LRP12Q9Y561 859 aa17.41■□□□□ 0.38
TRIM35-203ENST00000521253 IGHV2-70P01814 119 aa17.4■□□□□ 0.38
TRIM35-203ENST00000521253 IGHV2-5P01817 119 aa17.4■□□□□ 0.38
TRIM35-203ENST00000521253 ALDH3A2P51648 485 aa17.4■□□□□ 0.38
TRIM35-203ENST00000521253 PSMA6P60900 246 aaKnown RBP17.4■□□□□ 0.38
TRIM35-203ENST00000521253 FAM3AP98173 230 aa17.4■□□□□ 0.38
TRIM35-203ENST00000521253 MAB21L1Q13394 359 aa17.4■□□□□ 0.38
TRIM35-203ENST00000521253 OR8G1Q15617 311 aa17.4■□□□□ 0.38
TRIM35-203ENST00000521253 GFOD2Q3B7J2 385 aa17.4■□□□□ 0.38
TRIM35-203ENST00000521253 FAM120AOSQ5T036 256 aa17.4■□□□□ 0.38
TRIM35-203ENST00000521253 ZNF771Q7L3S4 317 aaPredicted RBP17.4■□□□□ 0.38
TRIM35-203ENST00000521253 KRT77Q7Z794 578 aa17.4■□□□□ 0.38
TRIM35-203ENST00000521253 MOGAT3Q86VF5 341 aa17.4■□□□□ 0.38
TRIM35-203ENST00000521253 GID4Q8IVV7 300 aa17.4■□□□□ 0.38
TRIM35-203ENST00000521253 CBR4Q8N4T8 237 aa17.4■□□□□ 0.38
TRIM35-203ENST00000521253 RAB39BQ96DA2 213 aa17.4■□□□□ 0.38
TRIM35-203ENST00000521253 PGAM5Q96HS1 289 aa17.4■□□□□ 0.38
TRIM35-203ENST00000521253 ADAT1Q9BUB4 502 aaKnown RBP17.4■□□□□ 0.38
TRIM35-203ENST00000521253 BEX2Q9BXY8 128 aa17.4■□□□□ 0.38
TRIM35-203ENST00000521253 SHARPINQ9H0F6 387 aa17.4■□□□□ 0.38
TRIM35-203ENST00000521253 ADGRL4Q9HBW9 690 aa17.4■□□□□ 0.38
TRIM35-203ENST00000521253 TANC2Q9HCD6 1990 aa17.4■□□□□ 0.38
TRIM35-203ENST00000521253 PRR32B1ATL7 298 aa17.39■□□□□ 0.37
TRIM35-203ENST00000521253 TMEM178BH3BS89 294 aa17.39■□□□□ 0.37
TRIM35-203ENST00000521253 PSMD9O00233 223 aa17.39■□□□□ 0.37
TRIM35-203ENST00000521253 MSMBP08118 114 aa17.39■□□□□ 0.37
TRIM35-203ENST00000521253 SBK2P0C263 348 aa17.39■□□□□ 0.37
TRIM35-203ENST00000521253 CD200P41217 278 aa17.39■□□□□ 0.37
TRIM35-203ENST00000521253 GATA4P43694 442 aa17.39■□□□□ 0.37
TRIM35-203ENST00000521253 RAD23AP54725 363 aa17.39■□□□□ 0.37
TRIM35-203ENST00000521253 DVL1P1P54792 670 aaPredicted RBP17.39■□□□□ 0.37
TRIM35-203ENST00000521253 BTG1P62324 171 aa17.39■□□□□ 0.37
TRIM35-203ENST00000521253 CR1LQ2VPA4 569 aa17.39■□□□□ 0.37
TRIM35-203ENST00000521253 KCTD18Q6PI47 426 aaPredicted RBP17.39■□□□□ 0.37
TRIM35-203ENST00000521253 IL17RELQ6ZVW7 336 aa17.39■□□□□ 0.37
TRIM35-203ENST00000521253 OR8J1Q8NGP2 316 aa17.39■□□□□ 0.37
TRIM35-203ENST00000521253 DVL3Q92997 716 aaPredicted RBP17.39■□□□□ 0.37
TRIM35-203ENST00000521253 TTTY10Q9BZA0 68 aa17.39■□□□□ 0.37
TRIM35-203ENST00000521253 NIPAL2Q9H841 368 aa17.39■□□□□ 0.37
TRIM35-203ENST00000521253 UBAP1Q9NZ09 502 aa17.39■□□□□ 0.37
TRIM35-203ENST00000521253 LPAR3Q9UBY5 353 aa17.39■□□□□ 0.37
TRIM35-203ENST00000521253 NOP16Q9Y3C1 178 aaKnown RBP17.39■□□□□ 0.37
TRIM35-203ENST00000521253 ORC6Q9Y5N6 252 aa17.39■□□□□ 0.37
TRIM35-203ENST00000521253 TMEM14AQ9Y6G1 99 aa17.39■□□□□ 0.37
TRIM35-203ENST00000521253 hCG_38984A0A1B0GV85 526 aa17.38■□□□□ 0.37
TRIM35-203ENST00000521253 IFNL4K9M1U5 179 aa17.38■□□□□ 0.37
TRIM35-203ENST00000521253 GMDSO60547 372 aa17.38■□□□□ 0.37
TRIM35-203ENST00000521253 DDOSTP39656 456 aa17.38■□□□□ 0.37
TRIM35-203ENST00000521253 PMELP40967 661 aa17.38■□□□□ 0.37
TRIM35-203ENST00000521253 ROM1Q03395 351 aa17.38■□□□□ 0.37
TRIM35-203ENST00000521253 ZMYND11Q15326 602 aa17.38■□□□□ 0.37
TRIM35-203ENST00000521253 DEGS2Q6QHC5 323 aa17.38■□□□□ 0.37
TRIM35-203ENST00000521253 GLCCI1Q86VQ1 547 aa17.38■□□□□ 0.37
TRIM35-203ENST00000521253 SLC35F2Q8IXU6 374 aa17.38■□□□□ 0.37
TRIM35-203ENST00000521253 RFLNBQ8N5W9 214 aa17.38■□□□□ 0.37
TRIM35-203ENST00000521253 CELF2-AS1Q8N7Q2 184 aa17.38■□□□□ 0.37
TRIM35-203ENST00000521253 OR51F2Q8NH61 342 aa17.38■□□□□ 0.37
TRIM35-203ENST00000521253 ASB17Q8WXJ9 295 aa17.38■□□□□ 0.37
TRIM35-203ENST00000521253 TMEM186Q96B77 213 aa17.38■□□□□ 0.37
TRIM35-203ENST00000521253 OR8B4Q96RC9 309 aa17.38■□□□□ 0.37
TRIM35-203ENST00000521253 MROQ9BYG7 248 aa17.38■□□□□ 0.37
TRIM35-203ENST00000521253 HIF1ANQ9NWT6 349 aa17.38■□□□□ 0.37
TRIM35-203ENST00000521253 HAO2Q9NYQ3 351 aa17.38■□□□□ 0.37
TRIM35-203ENST00000521253 DYSFO75923 2080 aa17.38■□□□□ 0.37
TRIM35-203ENST00000521253 MXRA5Q9NR99 2828 aa17.38■□□□□ 0.37
TRIM35-203ENST00000521253 CUBNO60494 3623 aa17.38■□□□□ 0.37
TRIM35-203ENST00000521253 CYB5R3P00387 301 aaPredicted RBP17.37■□□□□ 0.37
TRIM35-203ENST00000521253 CFL1P23528 166 aaKnown RBP17.37■□□□□ 0.37
TRIM35-203ENST00000521253 GSK3AP49840 483 aa17.37■□□□□ 0.37
TRIM35-203ENST00000521253 CDC42P60953 191 aa17.37■□□□□ 0.37
TRIM35-203ENST00000521253 ZIK1Q3SY52 487 aaPredicted RBP17.37■□□□□ 0.37
TRIM35-203ENST00000521253 PRAMEF6Q5VXH4 476 aa17.37■□□□□ 0.37
TRIM35-203ENST00000521253 LRRC28Q86X40 367 aaPredicted RBP17.37■□□□□ 0.37
TRIM35-203ENST00000521253 PQLC1Q8N2U9 271 aa17.37■□□□□ 0.37
TRIM35-203ENST00000521253 OR8B12Q8NGG6 310 aa17.37■□□□□ 0.37
TRIM35-203ENST00000521253 FAM81AQ8TBF8 368 aa17.37■□□□□ 0.37
TRIM35-203ENST00000521253 RGCCQ9H4X1 137 aa17.37■□□□□ 0.37
TRIM35-203ENST00000521253 WARS2Q9UGM6 360 aaKnown RBP17.37■□□□□ 0.37
TRIM35-203ENST00000521253 ANKRD30BLA7E2S9 258 aa17.36■□□□□ 0.37
TRIM35-203ENST00000521253 ZNF254O75437 659 aa17.36■□□□□ 0.37
TRIM35-203ENST00000521253 ZNF205O95201 554 aa17.36■□□□□ 0.37
TRIM35-203ENST00000521253 FAM157CP0CG43 387 aa17.36■□□□□ 0.37
TRIM35-203ENST00000521253 ANPEPP15144 967 aa17.36■□□□□ 0.37
TRIM35-203ENST00000521253 HTR1FP30939 366 aa17.36■□□□□ 0.37
TRIM35-203ENST00000521253 CXCR4P61073 352 aa17.36■□□□□ 0.37
TRIM35-203ENST00000521253 MPPED2Q15777 294 aa17.36■□□□□ 0.37
TRIM35-203ENST00000521253 ZNF181Q2M3W8 571 aa17.36■□□□□ 0.37
TRIM35-203ENST00000521253 TMEM155Q4W5P6 130 aa17.36■□□□□ 0.37
TRIM35-203ENST00000521253 ZNF322Q6U7Q0 402 aaPredicted RBP17.36■□□□□ 0.37
TRIM35-203ENST00000521253 ZNF679Q8IYX0 411 aa17.36■□□□□ 0.37
TRIM35-203ENST00000521253 SPICQ8N5J4 248 aa17.36■□□□□ 0.37
TRIM35-203ENST00000521253 OR51G2Q8NGK0 314 aa17.36■□□□□ 0.37
TRIM35-203ENST00000521253 Q8TCH9 128 aa17.36■□□□□ 0.37
TRIM35-203ENST00000521253 UBE2FQ969M7 185 aa17.36■□□□□ 0.37
TRIM35-203ENST00000521253 HRASLS5Q96KN8 279 aa17.36■□□□□ 0.37
TRIM35-203ENST00000521253 MNTQ99583 582 aa17.36■□□□□ 0.37
TRIM35-203ENST00000521253 C9orf16Q9BUW7 83 aa17.36■□□□□ 0.37
TRIM35-203ENST00000521253 UFSP2Q9NUQ7 469 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms