RNA–Protein interactions for RNA: ENST00000518689.5

VEGFA-218, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 630 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-218ENST00000518689 TAF13Q15543 124 aa10.33□□□□□ -0.76
VEGFA-218ENST00000518689 ZNF841Q6ZN19 808 aa10.33□□□□□ -0.76
VEGFA-218ENST00000518689 ERI1Q8IV48 349 aaKnown RBP10.33□□□□□ -0.76
VEGFA-218ENST00000518689 C1orf87Q8N0U7 546 aa10.33□□□□□ -0.76
VEGFA-218ENST00000518689 BPIFB2Q8N4F0 458 aa10.33□□□□□ -0.76
VEGFA-218ENST00000518689 PAPD5Q8NDF8 572 aaKnown RBP10.33□□□□□ -0.76
VEGFA-218ENST00000518689 C19orf18Q8NEA5 215 aa10.33□□□□□ -0.76
VEGFA-218ENST00000518689 OR56B2PQ8NGI1 322 aa10.33□□□□□ -0.76
VEGFA-218ENST00000518689 RNF133Q8WVZ7 376 aa10.33□□□□□ -0.76
VEGFA-218ENST00000518689 SGK3Q96BR1 496 aa10.33□□□□□ -0.76
VEGFA-218ENST00000518689 NEIL1Q96FI4 390 aaPredicted RBP10.33□□□□□ -0.76
VEGFA-218ENST00000518689 INTS14Q96SY0 518 aa10.33□□□□□ -0.76
VEGFA-218ENST00000518689 ADAT1Q9BUB4 502 aaKnown RBP10.33□□□□□ -0.76
VEGFA-218ENST00000518689 SLC22A4Q9H015 551 aa10.33□□□□□ -0.76
VEGFA-218ENST00000518689 MRPL15Q9P015 296 aaKnown RBP10.33□□□□□ -0.76
VEGFA-218ENST00000518689 ZNF319Q9P2F9 582 aa10.33□□□□□ -0.76
VEGFA-218ENST00000518689 ZNF69Q9UC07 566 aa10.33□□□□□ -0.76
VEGFA-218ENST00000518689 OR5V1Q9UGF6 321 aa10.33□□□□□ -0.76
VEGFA-218ENST00000518689 NUP50Q9UKX7 468 aa10.33□□□□□ -0.76
VEGFA-218ENST00000518689 N6AMT1Q9Y5N5 214 aa10.33□□□□□ -0.76
VEGFA-218ENST00000518689 TRIM77I1YAP6 450 aa10.32□□□□□ -0.76
VEGFA-218ENST00000518689 GNGT2O14610 69 aa10.32□□□□□ -0.76
VEGFA-218ENST00000518689 TNFRSF13BO14836 293 aaPredicted RBP10.32□□□□□ -0.76
VEGFA-218ENST00000518689 GYG2O15488 501 aa10.32□□□□□ -0.76
VEGFA-218ENST00000518689 XRCC2O43543 280 aa10.32□□□□□ -0.76
VEGFA-218ENST00000518689 FPR2P25090 351 aa10.32□□□□□ -0.76
VEGFA-218ENST00000518689 PSMB10P40306 273 aa10.32□□□□□ -0.76
VEGFA-218ENST00000518689 SLC15A1P46059 708 aa10.32□□□□□ -0.76
VEGFA-218ENST00000518689 CX3CR1P49238 355 aa10.32□□□□□ -0.76
VEGFA-218ENST00000518689 GNB2P62879 340 aa10.32□□□□□ -0.76
VEGFA-218ENST00000518689 GRB2P62993 217 aaKnown RBP10.32□□□□□ -0.76
VEGFA-218ENST00000518689 FAM3AP98173 230 aa10.32□□□□□ -0.76
VEGFA-218ENST00000518689 KLHL12Q53G59 568 aa10.32□□□□□ -0.76
VEGFA-218ENST00000518689 ARMCX4Q5H9R4 360 aa10.32□□□□□ -0.76
VEGFA-218ENST00000518689 DCDC5Q6ZRR9 648 aa10.32□□□□□ -0.76
VEGFA-218ENST00000518689 RHOUQ7L0Q8 258 aa10.32□□□□□ -0.76
VEGFA-218ENST00000518689 SLC16A9Q7RTY1 509 aa10.32□□□□□ -0.76
VEGFA-218ENST00000518689 BCL6BQ8N143 479 aaPredicted RBP10.32□□□□□ -0.76
VEGFA-218ENST00000518689 PLPP7Q8NBV4 271 aa10.32□□□□□ -0.76
VEGFA-218ENST00000518689 OR11L1Q8NGX0 322 aa10.32□□□□□ -0.76
VEGFA-218ENST00000518689 OR6N2Q8NGY6 317 aa10.32□□□□□ -0.76
VEGFA-218ENST00000518689 BCAS4Q8TDM0 211 aa10.32□□□□□ -0.76
VEGFA-218ENST00000518689 RAB40AQ8WXH6 277 aa10.32□□□□□ -0.76
VEGFA-218ENST00000518689 OTULINQ96BN8 352 aa10.32□□□□□ -0.76
VEGFA-218ENST00000518689 ZMYND19Q96E35 227 aaPredicted RBP10.32□□□□□ -0.76
VEGFA-218ENST00000518689 MRI1Q9BV20 369 aa10.32□□□□□ -0.76
VEGFA-218ENST00000518689 OR51V1Q9H2C8 321 aa10.32□□□□□ -0.76
VEGFA-218ENST00000518689 TOR3AQ9H497 397 aa10.32□□□□□ -0.76
VEGFA-218ENST00000518689 NTN4Q9HB63 628 aa10.32□□□□□ -0.76
VEGFA-218ENST00000518689 RNF7Q9UBF6 113 aa10.32□□□□□ -0.76
VEGFA-218ENST00000518689 POMPQ9Y244 141 aa10.32□□□□□ -0.76
VEGFA-218ENST00000518689 NOP16Q9Y3C1 178 aaKnown RBP10.32□□□□□ -0.76
VEGFA-218ENST00000518689 IGHV2-70DA0A0C4DH43 119 aa10.31□□□□□ -0.76
VEGFA-218ENST00000518689 KIR2DS1A0A191URI9 304 aa10.31□□□□□ -0.76
VEGFA-218ENST00000518689 TMEM89A2RUT3 159 aa10.31□□□□□ -0.76
VEGFA-218ENST00000518689 SELENOFO60613 162 aa10.31□□□□□ -0.76
VEGFA-218ENST00000518689 FKBP6O75344 327 aa10.31□□□□□ -0.76
VEGFA-218ENST00000518689 PPIAL4GP0DN37 164 aa10.31□□□□□ -0.76
VEGFA-218ENST00000518689 OSMP13725 252 aa10.31□□□□□ -0.76
VEGFA-218ENST00000518689 IRF2P14316 349 aa10.31□□□□□ -0.76
VEGFA-218ENST00000518689 HOXB6P17509 224 aaKnown RBP10.31□□□□□ -0.76
VEGFA-218ENST00000518689 POU1F1P28069 291 aa10.31□□□□□ -0.76
VEGFA-218ENST00000518689 OPRL1P41146 370 aa10.31□□□□□ -0.76
VEGFA-218ENST00000518689 PITPNBP48739 271 aa10.31□□□□□ -0.76
VEGFA-218ENST00000518689 COMPP49747 757 aaPredicted RBP10.31□□□□□ -0.76
VEGFA-218ENST00000518689 ZNF121P58317 390 aaPredicted RBP10.31□□□□□ -0.76
VEGFA-218ENST00000518689 CBX1P83916 185 aa10.31□□□□□ -0.76
VEGFA-218ENST00000518689 FLOT2Q14254 428 aa10.31□□□□□ -0.76
VEGFA-218ENST00000518689 DNAL1Q4LDG9 190 aa10.31□□□□□ -0.76
VEGFA-218ENST00000518689 WDR25Q64LD2 544 aaPredicted RBP10.31□□□□□ -0.76
VEGFA-218ENST00000518689 PLBD1Q6P4A8 553 aa10.31□□□□□ -0.76
VEGFA-218ENST00000518689 ZNF826PQ6ZT77 177 aa10.31□□□□□ -0.76
VEGFA-218ENST00000518689 DOK3Q7L591 496 aa10.31□□□□□ -0.76
VEGFA-218ENST00000518689 WDR86Q86TI4 376 aa10.31□□□□□ -0.76
VEGFA-218ENST00000518689 SPATA24Q86W54 205 aa10.31□□□□□ -0.76
VEGFA-218ENST00000518689 C11orf53Q8IXP5 236 aa10.31□□□□□ -0.76
VEGFA-218ENST00000518689 SIGLECL1Q8N7X8 197 aa10.31□□□□□ -0.76
VEGFA-218ENST00000518689 OR8B3Q8NGG8 313 aa10.31□□□□□ -0.76
VEGFA-218ENST00000518689 PLEKHA8Q96JA3 519 aa10.31□□□□□ -0.76
VEGFA-218ENST00000518689 ZNF48Q96MX3 618 aaPredicted RBP10.31□□□□□ -0.76
VEGFA-218ENST00000518689 OR8B2Q96RD0 313 aa10.31□□□□□ -0.76
VEGFA-218ENST00000518689 JMJD8Q96S16 334 aa10.31□□□□□ -0.76
VEGFA-218ENST00000518689 OPA3Q9H6K4 179 aa10.31□□□□□ -0.76
VEGFA-218ENST00000518689 PPP1R3EQ9H7J1 279 aa10.31□□□□□ -0.76
VEGFA-218ENST00000518689 FN3KRPQ9HA64 309 aa10.31□□□□□ -0.76
VEGFA-218ENST00000518689 CTSZQ9UBR2 303 aa10.31□□□□□ -0.76
VEGFA-218ENST00000518689 DNAJB9Q9UBS3 223 aa10.31□□□□□ -0.76
VEGFA-218ENST00000518689 KLHDC2Q9Y2U9 406 aa10.31□□□□□ -0.76
VEGFA-218ENST00000518689 hCG_38984A0A1B0GV85 526 aa10.3□□□□□ -0.76
VEGFA-218ENST00000518689 PRR23D1E9PI22 279 aaPredicted RBP10.3□□□□□ -0.76
VEGFA-218ENST00000518689 PRODHO43272 600 aa10.3□□□□□ -0.76
VEGFA-218ENST00000518689 TBX1O43435 398 aa10.3□□□□□ -0.76
VEGFA-218ENST00000518689 E2F6O75461 281 aa10.3□□□□□ -0.76
VEGFA-218ENST00000518689 FCN3O75636 299 aa10.3□□□□□ -0.76
VEGFA-218ENST00000518689 DNAJC8O75937 253 aaPredicted RBP10.3□□□□□ -0.76
VEGFA-218ENST00000518689 LHBP01229 141 aa10.3□□□□□ -0.76
VEGFA-218ENST00000518689 HMGN1P05114 100 aa10.3□□□□□ -0.76
VEGFA-218ENST00000518689 ANXA2P07355 339 aaKnown RBP10.3□□□□□ -0.76
VEGFA-218ENST00000518689 GRPP07492 148 aa10.3□□□□□ -0.76
VEGFA-218ENST00000518689 PRR23D2P0DMB1 279 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms