RNA–Protein interactions for RNA: ENST00000515588.1

SERF1B-208, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 2 BASIC

Gene SERF1B, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-208ENST00000515588 TMEM163Q8TC26 289 aa13.25□□□□□ -0.29
SERF1B-208ENST00000515588 BRD7Q9NPI1 651 aa13.25□□□□□ -0.29
SERF1B-208ENST00000515588 UBAP1Q9NZ09 502 aa13.25□□□□□ -0.29
SERF1B-208ENST00000515588 XRCC2O43543 280 aa13.24□□□□□ -0.29
SERF1B-208ENST00000515588 ZNF205O95201 554 aa13.24□□□□□ -0.29
SERF1B-208ENST00000515588 CYB5R3P00387 301 aaPredicted RBP13.24□□□□□ -0.29
SERF1B-208ENST00000515588 CD200P41217 278 aa13.24□□□□□ -0.29
SERF1B-208ENST00000515588 GATA4P43694 442 aa13.24□□□□□ -0.29
SERF1B-208ENST00000515588 RAD23AP54725 363 aa13.24□□□□□ -0.29
SERF1B-208ENST00000515588 BTG1P62324 171 aa13.24□□□□□ -0.29
SERF1B-208ENST00000515588 FAM3AP98173 230 aa13.24□□□□□ -0.29
SERF1B-208ENST00000515588 MEPCEQ7L2J0 689 aaKnown RBP13.24□□□□□ -0.29
SERF1B-208ENST00000515588 LRRC28Q86X40 367 aaPredicted RBP13.24□□□□□ -0.29
SERF1B-208ENST00000515588 OR51F2Q8NH61 342 aa13.24□□□□□ -0.29
SERF1B-208ENST00000515588 DVL3Q92997 716 aaPredicted RBP13.24□□□□□ -0.29
SERF1B-208ENST00000515588 RAB39BQ96DA2 213 aa13.24□□□□□ -0.29
SERF1B-208ENST00000515588 REEP6Q96HR9 211 aa13.24□□□□□ -0.29
SERF1B-208ENST00000515588 IL4I1Q96RQ9 567 aa13.24□□□□□ -0.29
SERF1B-208ENST00000515588 GABARAPL3Q9BY60 117 aa13.24□□□□□ -0.29
SERF1B-208ENST00000515588 PRRG3Q9BZD7 231 aa13.24□□□□□ -0.29
SERF1B-208ENST00000515588 YIPF3Q9GZM5 350 aa13.24□□□□□ -0.29
SERF1B-208ENST00000515588 MRPL15Q9P015 296 aaKnown RBP13.24□□□□□ -0.29
SERF1B-208ENST00000515588 COPS3Q9UNS2 423 aa13.24□□□□□ -0.29
SERF1B-208ENST00000515588 ARHGAP32A7KAX9 2087 aa13.24□□□□□ -0.29
SERF1B-208ENST00000515588 hCG_38984A0A1B0GV85 526 aa13.23□□□□□ -0.29
SERF1B-208ENST00000515588 PSMD9O00233 223 aa13.23□□□□□ -0.29
SERF1B-208ENST00000515588 APOC1P02654 83 aa13.23□□□□□ -0.29
SERF1B-208ENST00000515588 SRD5A1P18405 259 aa13.23□□□□□ -0.29
SERF1B-208ENST00000515588 HOXA4Q00056 320 aaPredicted RBP13.23□□□□□ -0.29
SERF1B-208ENST00000515588 OR8G1Q15617 311 aa13.23□□□□□ -0.29
SERF1B-208ENST00000515588 MPPED2Q15777 294 aa13.23□□□□□ -0.29
SERF1B-208ENST00000515588 TIGD6Q17RP2 521 aa13.23□□□□□ -0.29
SERF1B-208ENST00000515588 FAM201AQ5SY85 155 aa13.23□□□□□ -0.29
SERF1B-208ENST00000515588 LCN1P1Q5VSP4 162 aa13.23□□□□□ -0.29
SERF1B-208ENST00000515588 PRAMEF6Q5VXH4 476 aa13.23□□□□□ -0.29
SERF1B-208ENST00000515588 NXNL2Q5VZ03 156 aa13.23□□□□□ -0.29
SERF1B-208ENST00000515588 ZFP1Q6P2D0 407 aa13.23□□□□□ -0.29
SERF1B-208ENST00000515588 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.23□□□□□ -0.29
SERF1B-208ENST00000515588 CELF2-AS1Q8N7Q2 184 aa13.23□□□□□ -0.29
SERF1B-208ENST00000515588 OR52H1Q8NGJ2 320 aa13.23□□□□□ -0.29
SERF1B-208ENST00000515588 MDFIQ99750 246 aa13.23□□□□□ -0.29
SERF1B-208ENST00000515588 RBM4BQ9BQ04 359 aaKnown RBP13.23□□□□□ -0.29
SERF1B-208ENST00000515588 ADAT1Q9BUB4 502 aaKnown RBP13.23□□□□□ -0.29
SERF1B-208ENST00000515588 SLC22A4Q9H015 551 aa13.23□□□□□ -0.29
SERF1B-208ENST00000515588 OR10A2Q9H208 303 aa13.23□□□□□ -0.29
SERF1B-208ENST00000515588 RIBC2Q9H4K1 309 aa13.23□□□□□ -0.29
SERF1B-208ENST00000515588 OPA3Q9H6K4 179 aa13.23□□□□□ -0.29
SERF1B-208ENST00000515588 PPP1R3EQ9H7J1 279 aa13.23□□□□□ -0.29
SERF1B-208ENST00000515588 G6PC2Q9NQR9 355 aa13.23□□□□□ -0.29
SERF1B-208ENST00000515588 ENOPH1Q9UHY7 261 aa13.23□□□□□ -0.29
SERF1B-208ENST00000515588 LAMP5Q9UJQ1 280 aa13.23□□□□□ -0.29
SERF1B-208ENST00000515588 LRP12Q9Y561 859 aa13.23□□□□□ -0.29
SERF1B-208ENST00000515588 WNK2Q9Y3S1 2297 aa13.23□□□□□ -0.29
SERF1B-208ENST00000515588 TRAV20A0A0B4J274 112 aa13.22□□□□□ -0.29
SERF1B-208ENST00000515588 IFNL4K9M1U5 179 aa13.22□□□□□ -0.29
SERF1B-208ENST00000515588 PTBP3O95758 552 aaKnown RBP13.22□□□□□ -0.29
SERF1B-208ENST00000515588 ALPLP05186 524 aa13.22□□□□□ -0.29
SERF1B-208ENST00000515588 ANPEPP15144 967 aa13.22□□□□□ -0.29
SERF1B-208ENST00000515588 HNF1AP20823 631 aa13.22□□□□□ -0.29
SERF1B-208ENST00000515588 ZFP36P26651 326 aaKnown RBP13.22□□□□□ -0.29
SERF1B-208ENST00000515588 SEC61A1P61619 476 aaKnown RBP13.22□□□□□ -0.29
SERF1B-208ENST00000515588 ZNF181Q2M3W8 571 aa13.22□□□□□ -0.29
SERF1B-208ENST00000515588 GFOD2Q3B7J2 385 aa13.22□□□□□ -0.29
SERF1B-208ENST00000515588 TMEM155Q4W5P6 130 aa13.22□□□□□ -0.29
SERF1B-208ENST00000515588 RFLNBQ8N5W9 214 aa13.22□□□□□ -0.29
SERF1B-208ENST00000515588 Q8TCH9 128 aa13.22□□□□□ -0.29
SERF1B-208ENST00000515588 PGAM5Q96HS1 289 aa13.22□□□□□ -0.29
SERF1B-208ENST00000515588 LYZL4Q96KX0 146 aa13.22□□□□□ -0.29
SERF1B-208ENST00000515588 CNN2Q99439 309 aaKnown RBP13.22□□□□□ -0.29
SERF1B-208ENST00000515588 SP140LQ9H930 580 aa13.22□□□□□ -0.29
SERF1B-208ENST00000515588 ADGRL4Q9HBW9 690 aa13.22□□□□□ -0.29
SERF1B-208ENST00000515588 TMEM165Q9HC07 324 aa13.22□□□□□ -0.29
SERF1B-208ENST00000515588 UFSP2Q9NUQ7 469 aa13.22□□□□□ -0.29
SERF1B-208ENST00000515588 F5H0A9 414 aaPredicted RBP13.21□□□□□ -0.29
SERF1B-208ENST00000515588 EI24O14681 340 aa13.21□□□□□ -0.29
SERF1B-208ENST00000515588 GMDSO60547 372 aa13.21□□□□□ -0.29
SERF1B-208ENST00000515588 FAM20BO75063 409 aa13.21□□□□□ -0.29
SERF1B-208ENST00000515588 AVPP01185 164 aa13.21□□□□□ -0.29
SERF1B-208ENST00000515588 DDOSTP39656 456 aa13.21□□□□□ -0.29
SERF1B-208ENST00000515588 MDH2P40926 338 aaKnown RBP13.21□□□□□ -0.29
SERF1B-208ENST00000515588 GSK3AP49840 483 aa13.21□□□□□ -0.29
SERF1B-208ENST00000515588 PSMA6P60900 246 aaKnown RBP13.21□□□□□ -0.29
SERF1B-208ENST00000515588 ROM1Q03395 351 aa13.21□□□□□ -0.29
SERF1B-208ENST00000515588 C1orf229Q6ZS94 237 aaPredicted RBP13.21□□□□□ -0.29
SERF1B-208ENST00000515588 KRT77Q7Z794 578 aa13.21□□□□□ -0.29
SERF1B-208ENST00000515588 SPICQ8N5J4 248 aa13.21□□□□□ -0.29
SERF1B-208ENST00000515588 OR8B12Q8NGG6 310 aa13.21□□□□□ -0.29
SERF1B-208ENST00000515588 TTTY10Q9BZA0 68 aa13.21□□□□□ -0.29
SERF1B-208ENST00000515588 PATZ1Q9HBE1 687 aaKnown RBP13.21□□□□□ -0.29
SERF1B-208ENST00000515588 FAM206AQ9NX38 181 aa13.21□□□□□ -0.29
SERF1B-208ENST00000515588 HAO2Q9NYQ3 351 aa13.21□□□□□ -0.29
SERF1B-208ENST00000515588 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.21□□□□□ -0.29
SERF1B-208ENST00000515588 H2AFY2Q9P0M6 372 aaPredicted RBP13.21□□□□□ -0.29
SERF1B-208ENST00000515588 SLC22A31A6NKX4 558 aa13.2□□□□□ -0.3
SERF1B-208ENST00000515588 CEACAM18A8MTB9 384 aa13.2□□□□□ -0.3
SERF1B-208ENST00000515588 E9PQ18 207 aa13.2□□□□□ -0.3
SERF1B-208ENST00000515588 MAGEB4O15481 346 aaPredicted RBP13.2□□□□□ -0.3
SERF1B-208ENST00000515588 IFNA2P01563 188 aa13.2□□□□□ -0.3
SERF1B-208ENST00000515588 PCMT1P22061 227 aa13.2□□□□□ -0.3
SERF1B-208ENST00000515588 ACKR3P25106 362 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms