RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 HYAL4Q2M3T9 481 aa11.44□□□□□ -0.58
SMAD1-215ENST00000515385 ANKRD55Q3KP44 614 aa11.44□□□□□ -0.58
SMAD1-215ENST00000515385 CST9Q5W186 159 aa11.44□□□□□ -0.58
SMAD1-215ENST00000515385 GGNBP1Q5YKI7 109 aa11.44□□□□□ -0.58
SMAD1-215ENST00000515385 OR2T2Q6IF00 324 aa11.44□□□□□ -0.58
SMAD1-215ENST00000515385 SLC18B1Q6NT16 456 aa11.44□□□□□ -0.58
SMAD1-215ENST00000515385 KCTD18Q6PI47 426 aaPredicted RBP11.44□□□□□ -0.58
SMAD1-215ENST00000515385 TTLL10Q6ZVT0 673 aa11.44□□□□□ -0.58
SMAD1-215ENST00000515385 ZNF101Q8IZC7 436 aa11.44□□□□□ -0.58
SMAD1-215ENST00000515385 OR8G5Q8NG78 346 aa11.44□□□□□ -0.58
SMAD1-215ENST00000515385 OR13C3Q8NGS6 347 aa11.44□□□□□ -0.58
SMAD1-215ENST00000515385 Q8WTZ3 238 aa11.44□□□□□ -0.58
SMAD1-215ENST00000515385 CYB5D2Q8WUJ1 264 aa11.44□□□□□ -0.58
SMAD1-215ENST00000515385 HOXB13Q92826 284 aaPredicted RBP11.44□□□□□ -0.58
SMAD1-215ENST00000515385 WDR92Q96MX6 357 aa11.44□□□□□ -0.58
SMAD1-215ENST00000515385 PRRX2Q99811 253 aa11.44□□□□□ -0.58
SMAD1-215ENST00000515385 ACTR3CQ9C0K3 210 aaPredicted RBP11.44□□□□□ -0.58
SMAD1-215ENST00000515385 GSKIPQ9P0R6 139 aa11.44□□□□□ -0.58
SMAD1-215ENST00000515385 CXXC1Q9P0U4 656 aaPredicted RBP11.44□□□□□ -0.58
SMAD1-215ENST00000515385 THSD7BQ9C0I4 1608 aa11.44□□□□□ -0.58
SMAD1-215ENST00000515385 TCF20Q9UGU0 1960 aaKnown RBP11.44□□□□□ -0.58
SMAD1-215ENST00000515385 DCDC2BA2VCK2 349 aa11.44□□□□□ -0.58
SMAD1-215ENST00000515385 CTSVO60911 334 aa11.44□□□□□ -0.58
SMAD1-215ENST00000515385 DEDDO75618 318 aa11.44□□□□□ -0.58
SMAD1-215ENST00000515385 NSA2O95478 260 aaKnown RBP11.44□□□□□ -0.58
SMAD1-215ENST00000515385 SFTPBP07988 381 aa11.44□□□□□ -0.58
SMAD1-215ENST00000515385 OR13C7P0DN81 318 aa11.44□□□□□ -0.58
SMAD1-215ENST00000515385 TAGLN2P37802 199 aaKnown RBP11.44□□□□□ -0.58
SMAD1-215ENST00000515385 ZNF141Q15928 474 aa11.44□□□□□ -0.58
SMAD1-215ENST00000515385 MEP1BQ16820 701 aa11.44□□□□□ -0.58
SMAD1-215ENST00000515385 TMEM52BQ4KMG9 183 aa11.44□□□□□ -0.58
SMAD1-215ENST00000515385 TMEM215Q68D42 235 aa11.44□□□□□ -0.58
SMAD1-215ENST00000515385 ERN2Q76MJ5 926 aaKnown RBP11.44□□□□□ -0.58
SMAD1-215ENST00000515385 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.44□□□□□ -0.58
SMAD1-215ENST00000515385 RABEPKQ7Z6M1 372 aa11.44□□□□□ -0.58
SMAD1-215ENST00000515385 CATSPERDQ86XM0 798 aa11.44□□□□□ -0.58
SMAD1-215ENST00000515385 LYPD6Q86Y78 171 aa11.44□□□□□ -0.58
SMAD1-215ENST00000515385 OR52E1Q8NGJ3 308 aa11.44□□□□□ -0.58
SMAD1-215ENST00000515385 MFSD8Q8NHS3 518 aa11.44□□□□□ -0.58
SMAD1-215ENST00000515385 RHBDD1Q8TEB9 315 aa11.44□□□□□ -0.58
SMAD1-215ENST00000515385 ZNF385AQ96PM9 386 aaKnown RBP11.44□□□□□ -0.58
SMAD1-215ENST00000515385 INSM2Q96T92 566 aaPredicted RBP11.44□□□□□ -0.58
SMAD1-215ENST00000515385 OR11A1Q9GZK7 315 aa11.44□□□□□ -0.58
SMAD1-215ENST00000515385 FBLN5Q9UBX5 448 aa11.44□□□□□ -0.58
SMAD1-215ENST00000515385 PITPNC1Q9UKF7 332 aa11.44□□□□□ -0.58
SMAD1-215ENST00000515385 ZNF346Q9UL40 294 aaKnown RBP11.44□□□□□ -0.58
SMAD1-215ENST00000515385 HHLA2Q9UM44 414 aa11.44□□□□□ -0.58
SMAD1-215ENST00000515385 SLC22A13Q9Y226 551 aa11.44□□□□□ -0.58
SMAD1-215ENST00000515385 WIPF3A6NGB9 483 aa11.43□□□□□ -0.58
SMAD1-215ENST00000515385 ITGB1BP1O14713 200 aa11.43□□□□□ -0.58
SMAD1-215ENST00000515385 DLEU1O43261 78 aa11.43□□□□□ -0.58
SMAD1-215ENST00000515385 B3GALT2O43825 422 aa11.43□□□□□ -0.58
SMAD1-215ENST00000515385 CIDEAO60543 219 aa11.43□□□□□ -0.58
SMAD1-215ENST00000515385 CHRM2P08172 466 aa11.43□□□□□ -0.58
SMAD1-215ENST00000515385 ZNF888P0CJ79 500 aaPredicted RBP11.43□□□□□ -0.58
SMAD1-215ENST00000515385 ZNF10P21506 573 aaPredicted RBP11.43□□□□□ -0.58
SMAD1-215ENST00000515385 GPR3P46089 330 aa11.43□□□□□ -0.58
SMAD1-215ENST00000515385 DHPSP49366 369 aaPredicted RBP11.43□□□□□ -0.58
SMAD1-215ENST00000515385 UBE2KP61086 200 aa11.43□□□□□ -0.58
SMAD1-215ENST00000515385 RPS15AP62244 130 aaKnown RBP11.43□□□□□ -0.58
SMAD1-215ENST00000515385 SUPT4H1P63272 117 aaKnown RBP11.43□□□□□ -0.58
SMAD1-215ENST00000515385 BTG2P78543 158 aa11.43□□□□□ -0.58
SMAD1-215ENST00000515385 TMEM184AQ6ZMB5 413 aa11.43□□□□□ -0.58
SMAD1-215ENST00000515385 OR4N5Q8IXE1 308 aa11.43□□□□□ -0.58
SMAD1-215ENST00000515385 ZNF440Q8IYI8 595 aa11.43□□□□□ -0.58
SMAD1-215ENST00000515385 HSD17B11Q8NBQ5 300 aa11.43□□□□□ -0.58
SMAD1-215ENST00000515385 IRF7Q92985 503 aa11.43□□□□□ -0.58
SMAD1-215ENST00000515385 BSCL2Q96G97 398 aaPredicted RBP11.43□□□□□ -0.58
SMAD1-215ENST00000515385 RCC1LQ96I51 464 aaKnown RBP11.43□□□□□ -0.58
SMAD1-215ENST00000515385 SUCNR1Q9BXA5 334 aa11.43□□□□□ -0.58
SMAD1-215ENST00000515385 VN1R3Q9BXE9 311 aa11.43□□□□□ -0.58
SMAD1-215ENST00000515385 SLC25A31Q9H0C2 315 aa11.43□□□□□ -0.58
SMAD1-215ENST00000515385 GLRX2Q9NS18 164 aa11.43□□□□□ -0.58
SMAD1-215ENST00000515385 C1orf123Q9NWV4 160 aa11.43□□□□□ -0.58
SMAD1-215ENST00000515385 TUBD1Q9UJT1 453 aa11.43□□□□□ -0.58
SMAD1-215ENST00000515385 FBXO7Q9Y3I1 522 aa11.43□□□□□ -0.58
SMAD1-215ENST00000515385 B4DEV8 164 aa11.42□□□□□ -0.58
SMAD1-215ENST00000515385 GPR89AB7ZAQ6 455 aa11.42□□□□□ -0.58
SMAD1-215ENST00000515385 H3BQ15 152 aa11.42□□□□□ -0.58
SMAD1-215ENST00000515385 PRH1P02810 166 aa11.42□□□□□ -0.58
SMAD1-215ENST00000515385 SOD2P04179 222 aa11.42□□□□□ -0.58
SMAD1-215ENST00000515385 GSTP1P09211 210 aaKnown RBP11.42□□□□□ -0.58
SMAD1-215ENST00000515385 CXCL1P09341 107 aa11.42□□□□□ -0.58
SMAD1-215ENST00000515385 GPR89BP0CG08 455 aa11.42□□□□□ -0.58
SMAD1-215ENST00000515385 PNMTP11086 282 aa11.42□□□□□ -0.58
SMAD1-215ENST00000515385 GABRR1P24046 479 aa11.42□□□□□ -0.58
SMAD1-215ENST00000515385 CST5P28325 142 aaPredicted RBP11.42□□□□□ -0.58
SMAD1-215ENST00000515385 P2RY1P47900 373 aa11.42□□□□□ -0.58
SMAD1-215ENST00000515385 CLDN6P56747 220 aa11.42□□□□□ -0.58
SMAD1-215ENST00000515385 ZNHIT3Q15649 155 aaPredicted RBP11.42□□□□□ -0.58
SMAD1-215ENST00000515385 ZNF74Q16587 644 aa11.42□□□□□ -0.58
SMAD1-215ENST00000515385 GXYLT1Q4G148 440 aa11.42□□□□□ -0.58
SMAD1-215ENST00000515385 ZAR1Q86SH2 424 aa11.42□□□□□ -0.58
SMAD1-215ENST00000515385 C9orf40Q8IXQ3 194 aa11.42□□□□□ -0.58
SMAD1-215ENST00000515385 SLC24A4Q8NFF2 622 aa11.42□□□□□ -0.58
SMAD1-215ENST00000515385 SPPL3Q8TCT6 385 aa11.42□□□□□ -0.58
SMAD1-215ENST00000515385 NKD1Q969G9 470 aa11.42□□□□□ -0.58
SMAD1-215ENST00000515385 ANKRD9Q96BM1 317 aaPredicted RBP11.42□□□□□ -0.58
SMAD1-215ENST00000515385 RAB39BQ96DA2 213 aa11.42□□□□□ -0.58
SMAD1-215ENST00000515385 ARSGQ96EG1 525 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms