RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 OTX1P32242 354 aaPredicted RBP0.4□□□□□ -2.35
PDGFC-208ENST00000512711 SSR1P43307 286 aaKnown RBP0.4□□□□□ -2.35
PDGFC-208ENST00000512711 CRYBB2P43320 205 aa0.4□□□□□ -2.35
PDGFC-208ENST00000512711 FOXA1P55317 472 aa0.4□□□□□ -2.35
PDGFC-208ENST00000512711 STXBP1P61764 594 aaKnown RBP0.4□□□□□ -2.35
PDGFC-208ENST00000512711 OPN5Q6U736 354 aa0.4□□□□□ -2.35
PDGFC-208ENST00000512711 TCF24Q7RTU0 167 aa0.4□□□□□ -2.35
PDGFC-208ENST00000512711 ORMDL3Q8N138 153 aa0.4□□□□□ -2.35
PDGFC-208ENST00000512711 CBR4Q8N4T8 237 aa0.4□□□□□ -2.35
PDGFC-208ENST00000512711 DRAM1Q8N682 238 aa0.4□□□□□ -2.35
PDGFC-208ENST00000512711 OR8J1Q8NGP2 316 aa0.4□□□□□ -2.35
PDGFC-208ENST00000512711 NUBPLQ8TB37 319 aa0.4□□□□□ -2.35
PDGFC-208ENST00000512711 ZNF606Q8WXB4 792 aa0.4□□□□□ -2.35
PDGFC-208ENST00000512711 RBPMSQ93062 196 aaKnown RBP0.4□□□□□ -2.35
PDGFC-208ENST00000512711 HAUS1Q96CS2 278 aa0.4□□□□□ -2.35
PDGFC-208ENST00000512711 NRBF2Q96F24 287 aa0.4□□□□□ -2.35
PDGFC-208ENST00000512711 MS4A8Q9BY19 250 aa0.4□□□□□ -2.35
PDGFC-208ENST00000512711 PLEKHF2Q9H8W4 249 aa0.4□□□□□ -2.35
PDGFC-208ENST00000512711 HPF1Q9NWY4 346 aa0.4□□□□□ -2.35
PDGFC-208ENST00000512711 DCAF16Q9NXF7 216 aa0.4□□□□□ -2.35
PDGFC-208ENST00000512711 IKZF2Q9UKS7 526 aa0.4□□□□□ -2.35
PDGFC-208ENST00000512711 AP1M2Q9Y6Q5 423 aa0.4□□□□□ -2.35
PDGFC-208ENST00000512711 FBN2P35556 2912 aa0.4□□□□□ -2.35
PDGFC-208ENST00000512711 SDK1Q7Z5N4 2213 aa0.4□□□□□ -2.35
PDGFC-208ENST00000512711 SIGLEC1Q9BZZ2 1709 aa0.39□□□□□ -2.35
PDGFC-208ENST00000512711 PLXNB3Q9ULL4 1909 aa0.39□□□□□ -2.35
PDGFC-208ENST00000512711 CR1P17927 2039 aa0.39□□□□□ -2.35
PDGFC-208ENST00000512711 C15orf38-AP3S2A0A0A6YYH1 394 aa0.39□□□□□ -2.35
PDGFC-208ENST00000512711 PCP4L1A6NKN8 68 aa0.39□□□□□ -2.35
PDGFC-208ENST00000512711 SYCE1LA8MT33 242 aa0.39□□□□□ -2.35
PDGFC-208ENST00000512711 H3BQ85 93 aa0.39□□□□□ -2.35
PDGFC-208ENST00000512711 M0R1X1 148 aa0.39□□□□□ -2.35
PDGFC-208ENST00000512711 SYNGR2O43760 224 aa0.39□□□□□ -2.35
PDGFC-208ENST00000512711 MTX2O75431 263 aa0.39□□□□□ -2.35
PDGFC-208ENST00000512711 CLDN11O75508 207 aa0.39□□□□□ -2.35
PDGFC-208ENST00000512711 SCO1O75880 301 aa0.39□□□□□ -2.35
PDGFC-208ENST00000512711 CST1P01037 141 aa0.39□□□□□ -2.35
PDGFC-208ENST00000512711 IGHV1-46P01743 117 aa0.39□□□□□ -2.35
PDGFC-208ENST00000512711 SERPINE2P07093 398 aa0.39□□□□□ -2.35
PDGFC-208ENST00000512711 ANXA5P08758 320 aa0.39□□□□□ -2.35
PDGFC-208ENST00000512711 UQCRFS1P1P0C7P4 283 aa0.39□□□□□ -2.35
PDGFC-208ENST00000512711 NAA10P41227 235 aaPredicted RBP0.39□□□□□ -2.35
PDGFC-208ENST00000512711 SP4Q02446 784 aa0.39□□□□□ -2.35
PDGFC-208ENST00000512711 C2orf54Q08AI8 447 aa0.39□□□□□ -2.35
PDGFC-208ENST00000512711 GCSAMLQ5JQS6 135 aa0.39□□□□□ -2.35
PDGFC-208ENST00000512711 ATAD3BQ5T9A4 648 aa0.39□□□□□ -2.35
PDGFC-208ENST00000512711 CD300LGQ6UXG3 332 aa0.39□□□□□ -2.35
PDGFC-208ENST00000512711 MBOAT2Q6ZWT7 520 aa0.39□□□□□ -2.35
PDGFC-208ENST00000512711 FA2HQ7L5A8 372 aa0.39□□□□□ -2.35
PDGFC-208ENST00000512711 TMEM25Q86YD3 366 aa0.39□□□□□ -2.35
PDGFC-208ENST00000512711 TGIF2LXQ8IUE1 241 aa0.39□□□□□ -2.35
PDGFC-208ENST00000512711 CMTM1Q8IZ96 169 aa0.39□□□□□ -2.35
PDGFC-208ENST00000512711 SNX31Q8N9S9 440 aa0.39□□□□□ -2.35
PDGFC-208ENST00000512711 RNASE11Q8TAA1 199 aaKnown RBP0.39□□□□□ -2.35
PDGFC-208ENST00000512711 RXFP4Q8TDU9 374 aa0.39□□□□□ -2.35
PDGFC-208ENST00000512711 GPR151Q8TDV0 419 aa0.39□□□□□ -2.35
PDGFC-208ENST00000512711 KIFAP3Q92845 792 aa0.39□□□□□ -2.35
PDGFC-208ENST00000512711 SYAP1Q96A49 352 aaPredicted RBP0.39□□□□□ -2.35
PDGFC-208ENST00000512711 TUBGCP3Q96CW5 907 aa0.39□□□□□ -2.35
PDGFC-208ENST00000512711 ZNF75AQ96N20 296 aa0.39□□□□□ -2.35
PDGFC-208ENST00000512711 MUC5ACP98088 5654 aa0.38□□□□□ -2.35
PDGFC-208ENST00000512711 CCL15-CCL14A0A0B4J2E2 113 aa0.38□□□□□ -2.35
PDGFC-208ENST00000512711 ISPDA4D126 451 aa0.38□□□□□ -2.35
PDGFC-208ENST00000512711 IZUMO1RA6ND01 250 aa0.38□□□□□ -2.35
PDGFC-208ENST00000512711 GOLGA6L4A6NEF3 574 aa0.38□□□□□ -2.35
PDGFC-208ENST00000512711 A8MWL6 223 aa0.38□□□□□ -2.35
PDGFC-208ENST00000512711 DNALI1O14645 258 aaPredicted RBP0.38□□□□□ -2.35
PDGFC-208ENST00000512711 NRASP01111 189 aa0.38□□□□□ -2.35
PDGFC-208ENST00000512711 HRASP01112 189 aa0.38□□□□□ -2.35
PDGFC-208ENST00000512711 KRASP01116 189 aa0.38□□□□□ -2.35
PDGFC-208ENST00000512711 HSPD1P10809 573 aaKnown RBP0.38□□□□□ -2.35
PDGFC-208ENST00000512711 CSNK2A2P19784 350 aaPredicted RBP0.38□□□□□ -2.35
PDGFC-208ENST00000512711 PRPS1L1P21108 318 aa0.38□□□□□ -2.35
PDGFC-208ENST00000512711 CEBPDP49716 269 aaPredicted RBP0.38□□□□□ -2.35
PDGFC-208ENST00000512711 BST2Q10589 180 aaKnown RBP0.38□□□□□ -2.35
PDGFC-208ENST00000512711 TSC22D1Q15714 1073 aa0.38□□□□□ -2.35
PDGFC-208ENST00000512711 CCL15Q16663 113 aa0.38□□□□□ -2.35
PDGFC-208ENST00000512711 VPS26BQ4G0F5 336 aa0.38□□□□□ -2.35
PDGFC-208ENST00000512711 CTSL3PQ5NE16 218 aa0.38□□□□□ -2.35
PDGFC-208ENST00000512711 PPM1LQ5SGD2 360 aa0.38□□□□□ -2.35
PDGFC-208ENST00000512711 C9orf135Q5VTT2 229 aa0.38□□□□□ -2.35
PDGFC-208ENST00000512711 CBLN2Q8IUK8 224 aa0.38□□□□□ -2.35
PDGFC-208ENST00000512711 BBS7Q8IWZ6 715 aa0.38□□□□□ -2.35
PDGFC-208ENST00000512711 CDH26Q8IXH8 852 aa0.38□□□□□ -2.35
PDGFC-208ENST00000512711 ZNF567Q8N184 647 aa0.38□□□□□ -2.35
PDGFC-208ENST00000512711 EIF4E3Q8N5X7 224 aaKnown RBP0.38□□□□□ -2.35
PDGFC-208ENST00000512711 OR4D6Q8NGJ1 314 aa0.38□□□□□ -2.35
PDGFC-208ENST00000512711 OR8K3Q8NH51 312 aa0.38□□□□□ -2.35
PDGFC-208ENST00000512711 ZNF420Q8TAQ5 688 aaPredicted RBP0.38□□□□□ -2.35
PDGFC-208ENST00000512711 OR51E1Q8TCB6 317 aa0.38□□□□□ -2.35
PDGFC-208ENST00000512711 OR5P3Q8WZ94 311 aa0.38□□□□□ -2.35
PDGFC-208ENST00000512711 ECHDC3Q96DC8 303 aa0.38□□□□□ -2.35
PDGFC-208ENST00000512711 KCNS3Q9BQ31 491 aa0.38□□□□□ -2.35
PDGFC-208ENST00000512711 RACGAP1Q9H0H5 632 aa0.38□□□□□ -2.35
PDGFC-208ENST00000512711 RRAGDQ9NQL2 400 aaPredicted RBP0.38□□□□□ -2.35
PDGFC-208ENST00000512711 RBFOX1Q9NWB1 397 aaKnown RBP0.38□□□□□ -2.35
PDGFC-208ENST00000512711 HRASLS2Q9NWW9 162 aa0.38□□□□□ -2.35
PDGFC-208ENST00000512711 UXTQ9UBK9 157 aaPredicted RBP0.38□□□□□ -2.35
PDGFC-208ENST00000512711 ZNF469Q96JG9 3925 aaPredicted RBP0.37□□□□□ -2.35
PDGFC-208ENST00000512711 USP47Q96K76 1375 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms