RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 TMIGD2Q96BF3 282 aa9.39□□□□□ -0.91
PFDN1-204ENST00000512707 YIPF6Q96EC8 236 aa9.39□□□□□ -0.91
PFDN1-204ENST00000512707 PGLYRP3Q96LB9 341 aa9.39□□□□□ -0.91
PFDN1-204ENST00000512707 BCL7BQ9BQE9 202 aa9.39□□□□□ -0.91
PFDN1-204ENST00000512707 SLITRK2Q9H156 845 aa9.39□□□□□ -0.91
PFDN1-204ENST00000512707 GPR84Q9NQS5 396 aa9.39□□□□□ -0.91
PFDN1-204ENST00000512707 NPAP1Q9NZP6 1156 aa9.39□□□□□ -0.91
PFDN1-204ENST00000512707 CKLFQ9UBR5 152 aa9.39□□□□□ -0.91
PFDN1-204ENST00000512707 POU2F3Q9UKI9 436 aa9.39□□□□□ -0.91
PFDN1-204ENST00000512707 UTP20O75691 2785 aaKnown RBP9.38□□□□□ -0.91
PFDN1-204ENST00000512707 NBPF19A0A087WUL8 3843 aa9.38□□□□□ -0.91
PFDN1-204ENST00000512707 LOC100506127A0A0U1RQW1 187 aa9.38□□□□□ -0.91
PFDN1-204ENST00000512707 TRDV1A0A1B0GX56 115 aa9.38□□□□□ -0.91
PFDN1-204ENST00000512707 LOC390937A0A1W2PQ73 354 aa9.38□□□□□ -0.91
PFDN1-204ENST00000512707 DHRS7CA6NNS2 312 aa9.38□□□□□ -0.91
PFDN1-204ENST00000512707 H3BSA7 217 aa9.38□□□□□ -0.91
PFDN1-204ENST00000512707 ABCD4O14678 606 aa9.38□□□□□ -0.91
PFDN1-204ENST00000512707 SMPD2O60906 423 aa9.38□□□□□ -0.91
PFDN1-204ENST00000512707 CD3EP07766 207 aa9.38□□□□□ -0.91
PFDN1-204ENST00000512707 FAM157BP0CG42 384 aa9.38□□□□□ -0.91
PFDN1-204ENST00000512707 SELEP16581 610 aa9.38□□□□□ -0.91
PFDN1-204ENST00000512707 NR4A1P22736 598 aa9.38□□□□□ -0.91
PFDN1-204ENST00000512707 GADD45AP24522 165 aa9.38□□□□□ -0.91
PFDN1-204ENST00000512707 GCH1P30793 250 aa9.38□□□□□ -0.91
PFDN1-204ENST00000512707 TGFBR2P37173 567 aa9.38□□□□□ -0.91
PFDN1-204ENST00000512707 WNT5AP41221 380 aa9.38□□□□□ -0.91
PFDN1-204ENST00000512707 MAP2K3P46734 347 aa9.38□□□□□ -0.91
PFDN1-204ENST00000512707 SELENOVP59797 346 aa9.38□□□□□ -0.91
PFDN1-204ENST00000512707 HGFACQ04756 655 aa9.38□□□□□ -0.91
PFDN1-204ENST00000512707 BSPH1Q075Z2 132 aa9.38□□□□□ -0.91
PFDN1-204ENST00000512707 SNAI3Q3KNW1 292 aa9.38□□□□□ -0.91
PFDN1-204ENST00000512707 ACSM3Q53FZ2 586 aa9.38□□□□□ -0.91
PFDN1-204ENST00000512707 GLYATL3Q5SZD4 288 aa9.38□□□□□ -0.91
PFDN1-204ENST00000512707 SLC22A25Q6T423 547 aa9.38□□□□□ -0.91
PFDN1-204ENST00000512707 CEACAM19Q7Z692 300 aa9.38□□□□□ -0.91
PFDN1-204ENST00000512707 NAA40Q86UY6 237 aa9.38□□□□□ -0.91
PFDN1-204ENST00000512707 MYPOPQ86VE0 399 aaPredicted RBP9.38□□□□□ -0.91
PFDN1-204ENST00000512707 ANKRD13BQ86YJ7 626 aa9.38□□□□□ -0.91
PFDN1-204ENST00000512707 PAQR4Q8N4S7 273 aaPredicted RBP9.38□□□□□ -0.91
PFDN1-204ENST00000512707 OR1J1Q8NGS3 322 aa9.38□□□□□ -0.91
PFDN1-204ENST00000512707 RNF166Q96A37 237 aaPredicted RBP9.38□□□□□ -0.91
PFDN1-204ENST00000512707 FAM71F1Q96KD3 344 aaPredicted RBP9.38□□□□□ -0.91
PFDN1-204ENST00000512707 PSMG3-AS1Q96PY0 264 aa9.38□□□□□ -0.91
PFDN1-204ENST00000512707 CHCHD6Q9BRQ6 235 aa9.38□□□□□ -0.91
PFDN1-204ENST00000512707 FAM192AQ9GZU8 254 aa9.38□□□□□ -0.91
PFDN1-204ENST00000512707 OR51B6Q9H340 312 aa9.38□□□□□ -0.91
PFDN1-204ENST00000512707 NEK6Q9HC98 313 aa9.38□□□□□ -0.91
PFDN1-204ENST00000512707 PTTG3PQ9NZH4 202 aa9.38□□□□□ -0.91
PFDN1-204ENST00000512707 CREBBPQ92793 2442 aa9.38□□□□□ -0.91
PFDN1-204ENST00000512707 WIPF3A6NGB9 483 aa9.37□□□□□ -0.91
PFDN1-204ENST00000512707 GGT3PA6NGU5 568 aa9.37□□□□□ -0.91
PFDN1-204ENST00000512707 ATP6V1G2-DDX39BF2Z307 99 aa9.37□□□□□ -0.91
PFDN1-204ENST00000512707 GABRPO00591 440 aa9.37□□□□□ -0.91
PFDN1-204ENST00000512707 DHRS3O75911 302 aa9.37□□□□□ -0.91
PFDN1-204ENST00000512707 RAF1P04049 648 aa9.37□□□□□ -0.91
PFDN1-204ENST00000512707 OCMP0CE72 109 aaPredicted RBP9.37□□□□□ -0.91
PFDN1-204ENST00000512707 CCL1P22362 96 aa9.37□□□□□ -0.91
PFDN1-204ENST00000512707 MYL9P24844 172 aa9.37□□□□□ -0.91
PFDN1-204ENST00000512707 GNALP38405 381 aa9.37□□□□□ -0.91
PFDN1-204ENST00000512707 SNTB2Q13425 540 aaKnown RBP9.37□□□□□ -0.91
PFDN1-204ENST00000512707 DOC2BQ14184 412 aa9.37□□□□□ -0.91
PFDN1-204ENST00000512707 ZNF718Q3SXZ3 478 aa9.37□□□□□ -0.91
PFDN1-204ENST00000512707 ZMAT1Q5H9K5 638 aa9.37□□□□□ -0.91
PFDN1-204ENST00000512707 NCMAPQ5T1S8 102 aa9.37□□□□□ -0.91
PFDN1-204ENST00000512707 RGS7BPQ6MZT1 257 aaPredicted RBP9.37□□□□□ -0.91
PFDN1-204ENST00000512707 CD200R1LQ6Q8B3 271 aa9.37□□□□□ -0.91
PFDN1-204ENST00000512707 RFPL4BQ6ZWI9 263 aa9.37□□□□□ -0.91
PFDN1-204ENST00000512707 ZNF101Q8IZC7 436 aa9.37□□□□□ -0.91
PFDN1-204ENST00000512707 RDH10Q8IZV5 341 aa9.37□□□□□ -0.91
PFDN1-204ENST00000512707 CSNK2A3Q8NEV1 391 aa9.37□□□□□ -0.91
PFDN1-204ENST00000512707 SEMA6DQ8NFY4 1073 aa9.37□□□□□ -0.91
PFDN1-204ENST00000512707 KBTBD8Q8NFY9 601 aa9.37□□□□□ -0.91
PFDN1-204ENST00000512707 OR2AE1Q8NHA4 323 aa9.37□□□□□ -0.91
PFDN1-204ENST00000512707 TMEM106AQ96A25 262 aa9.37□□□□□ -0.91
PFDN1-204ENST00000512707 SPSB4Q96A44 273 aa9.37□□□□□ -0.91
PFDN1-204ENST00000512707 SGK3Q96BR1 496 aa9.37□□□□□ -0.91
PFDN1-204ENST00000512707 C10orf35Q96D05 121 aa9.37□□□□□ -0.91
PFDN1-204ENST00000512707 PLPPR2Q96GM1 343 aa9.37□□□□□ -0.91
PFDN1-204ENST00000512707 KCTD7Q96MP8 289 aa9.37□□□□□ -0.91
PFDN1-204ENST00000512707 OR14A2Q96R54 314 aa9.37□□□□□ -0.91
PFDN1-204ENST00000512707 ENPP5Q9UJA9 477 aa9.37□□□□□ -0.91
PFDN1-204ENST00000512707 STARD10Q9Y365 291 aa9.37□□□□□ -0.91
PFDN1-204ENST00000512707 HIVEP3Q5T1R4 2406 aa9.37□□□□□ -0.91
PFDN1-204ENST00000512707 TRBV5-5A0A0J9YX44 114 aa9.36□□□□□ -0.91
PFDN1-204ENST00000512707 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.36□□□□□ -0.91
PFDN1-204ENST00000512707 DPPA5A6NC42 116 aa9.36□□□□□ -0.91
PFDN1-204ENST00000512707 DPRXA6NFQ7 191 aa9.36□□□□□ -0.91
PFDN1-204ENST00000512707 PRSS44E7EML9 344 aa9.36□□□□□ -0.91
PFDN1-204ENST00000512707 ZNF701M0R085 212 aaPredicted RBP9.36□□□□□ -0.91
PFDN1-204ENST00000512707 SLC22A1O15245 554 aa9.36□□□□□ -0.91
PFDN1-204ENST00000512707 GABARAPO95166 117 aa9.36□□□□□ -0.91
PFDN1-204ENST00000512707 GOSR1O95249 250 aa9.36□□□□□ -0.91
PFDN1-204ENST00000512707 NGFP01138 241 aa9.36□□□□□ -0.91
PFDN1-204ENST00000512707 RAC2P15153 192 aa9.36□□□□□ -0.91
PFDN1-204ENST00000512707 CALCRP30988 508 aa9.36□□□□□ -0.91
PFDN1-204ENST00000512707 FGF9P31371 208 aaPredicted RBP9.36□□□□□ -0.91
PFDN1-204ENST00000512707 DDOSTP39656 456 aa9.36□□□□□ -0.91
PFDN1-204ENST00000512707 SOX2P48431 317 aa9.36□□□□□ -0.91
PFDN1-204ENST00000512707 GSK3AP49840 483 aa9.36□□□□□ -0.91
PFDN1-204ENST00000512707 PPP3R1P63098 170 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms