RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 CD200P41217 278 aa13.57□□□□□ -0.24
PDLIM5-216ENST00000511767 ZMYND11Q15326 602 aa13.57□□□□□ -0.24
PDLIM5-216ENST00000511767 TMEM155Q4W5P6 130 aa13.57□□□□□ -0.24
PDLIM5-216ENST00000511767 IL17RELQ6ZVW7 336 aa13.57□□□□□ -0.24
PDLIM5-216ENST00000511767 FAM57BQ71RH2 274 aa13.57□□□□□ -0.24
PDLIM5-216ENST00000511767 MOGAT3Q86VF5 341 aa13.57□□□□□ -0.24
PDLIM5-216ENST00000511767 GLCCI1Q86VQ1 547 aa13.57□□□□□ -0.24
PDLIM5-216ENST00000511767 OR52H1Q8NGJ2 320 aa13.57□□□□□ -0.24
PDLIM5-216ENST00000511767 OR51F2Q8NH61 342 aa13.57□□□□□ -0.24
PDLIM5-216ENST00000511767 TMEM163Q8TC26 289 aa13.57□□□□□ -0.24
PDLIM5-216ENST00000511767 ERGIC1Q969X5 290 aa13.57□□□□□ -0.24
PDLIM5-216ENST00000511767 RAB39BQ96DA2 213 aa13.57□□□□□ -0.24
PDLIM5-216ENST00000511767 IL4I1Q96RQ9 567 aa13.57□□□□□ -0.24
PDLIM5-216ENST00000511767 MDFIQ99750 246 aa13.57□□□□□ -0.24
PDLIM5-216ENST00000511767 MRPL15Q9P015 296 aaKnown RBP13.57□□□□□ -0.24
PDLIM5-216ENST00000511767 H2AFY2Q9P0M6 372 aaPredicted RBP13.57□□□□□ -0.24
PDLIM5-216ENST00000511767 TRAV20A0A0B4J274 112 aa13.56□□□□□ -0.24
PDLIM5-216ENST00000511767 SAC3D1A6NKF1 404 aa13.56□□□□□ -0.24
PDLIM5-216ENST00000511767 TBX1O43435 398 aa13.56□□□□□ -0.24
PDLIM5-216ENST00000511767 FSTL3O95633 263 aa13.56□□□□□ -0.24
PDLIM5-216ENST00000511767 IFNA2P01563 188 aa13.56□□□□□ -0.24
PDLIM5-216ENST00000511767 MMP16P51512 607 aa13.56□□□□□ -0.24
PDLIM5-216ENST00000511767 RAD23AP54725 363 aa13.56□□□□□ -0.24
PDLIM5-216ENST00000511767 OR8G1Q15617 311 aa13.56□□□□□ -0.24
PDLIM5-216ENST00000511767 MPPED2Q15777 294 aa13.56□□□□□ -0.24
PDLIM5-216ENST00000511767 NXNL2Q5VZ03 156 aa13.56□□□□□ -0.24
PDLIM5-216ENST00000511767 ZFP1Q6P2D0 407 aa13.56□□□□□ -0.24
PDLIM5-216ENST00000511767 DEGS2Q6QHC5 323 aa13.56□□□□□ -0.24
PDLIM5-216ENST00000511767 LRRN1Q6UXK5 716 aa13.56□□□□□ -0.24
PDLIM5-216ENST00000511767 C10orf67Q8IYJ2 551 aa13.56□□□□□ -0.24
PDLIM5-216ENST00000511767 Q8TCH9 128 aa13.56□□□□□ -0.24
PDLIM5-216ENST00000511767 REEP6Q96HR9 211 aa13.56□□□□□ -0.24
PDLIM5-216ENST00000511767 GAL3ST1Q99999 423 aa13.56□□□□□ -0.24
PDLIM5-216ENST00000511767 OR10A2Q9H208 303 aa13.56□□□□□ -0.24
PDLIM5-216ENST00000511767 OPA3Q9H6K4 179 aa13.56□□□□□ -0.24
PDLIM5-216ENST00000511767 PATZ1Q9HBE1 687 aaKnown RBP13.56□□□□□ -0.24
PDLIM5-216ENST00000511767 BRD7Q9NPI1 651 aa13.56□□□□□ -0.24
PDLIM5-216ENST00000511767 G6PC2Q9NQR9 355 aa13.56□□□□□ -0.24
PDLIM5-216ENST00000511767 HAO2Q9NYQ3 351 aa13.56□□□□□ -0.24
PDLIM5-216ENST00000511767 UBAP1Q9NZ09 502 aa13.56□□□□□ -0.24
PDLIM5-216ENST00000511767 DNAJC27Q9NZQ0 273 aa13.56□□□□□ -0.24
PDLIM5-216ENST00000511767 ENOPH1Q9UHY7 261 aa13.56□□□□□ -0.24
PDLIM5-216ENST00000511767 LAMP5Q9UJQ1 280 aa13.56□□□□□ -0.24
PDLIM5-216ENST00000511767 CUBNO60494 3623 aa13.56□□□□□ -0.24
PDLIM5-216ENST00000511767 TANC2Q9HCD6 1990 aa13.55□□□□□ -0.24
PDLIM5-216ENST00000511767 ISPDA4D126 451 aa13.55□□□□□ -0.24
PDLIM5-216ENST00000511767 PRR32B1ATL7 298 aa13.55□□□□□ -0.24
PDLIM5-216ENST00000511767 M0R129 80 aa13.55□□□□□ -0.24
PDLIM5-216ENST00000511767 CYB5R3P00387 301 aaPredicted RBP13.55□□□□□ -0.24
PDLIM5-216ENST00000511767 AVPP01185 164 aa13.55□□□□□ -0.24
PDLIM5-216ENST00000511767 WNT2P09544 360 aa13.55□□□□□ -0.24
PDLIM5-216ENST00000511767 PCMT1P22061 227 aa13.55□□□□□ -0.24
PDLIM5-216ENST00000511767 ZFP36P26651 326 aaKnown RBP13.55□□□□□ -0.24
PDLIM5-216ENST00000511767 GSK3AP49840 483 aa13.55□□□□□ -0.24
PDLIM5-216ENST00000511767 BTG1P62324 171 aa13.55□□□□□ -0.24
PDLIM5-216ENST00000511767 ROM1Q03395 351 aa13.55□□□□□ -0.24
PDLIM5-216ENST00000511767 TIGD6Q17RP2 521 aa13.55□□□□□ -0.24
PDLIM5-216ENST00000511767 SPERTQ8NA61 448 aa13.55□□□□□ -0.24
PDLIM5-216ENST00000511767 PLPP7Q8NBV4 271 aa13.55□□□□□ -0.24
PDLIM5-216ENST00000511767 OR56B2PQ8NGI1 322 aa13.55□□□□□ -0.24
PDLIM5-216ENST00000511767 PGAM5Q96HS1 289 aa13.55□□□□□ -0.24
PDLIM5-216ENST00000511767 RBM4BQ9BQ04 359 aaKnown RBP13.55□□□□□ -0.24
PDLIM5-216ENST00000511767 GABARAPL3Q9BY60 117 aa13.55□□□□□ -0.24
PDLIM5-216ENST00000511767 PRRG3Q9BZD7 231 aa13.55□□□□□ -0.24
PDLIM5-216ENST00000511767 NIPAL2Q9H841 368 aa13.55□□□□□ -0.24
PDLIM5-216ENST00000511767 COPS3Q9UNS2 423 aa13.55□□□□□ -0.24
PDLIM5-216ENST00000511767 NOP16Q9Y3C1 178 aaKnown RBP13.55□□□□□ -0.24
PDLIM5-216ENST00000511767 ACOD1A6NK06 481 aa13.54□□□□□ -0.24
PDLIM5-216ENST00000511767 E9PQ18 207 aa13.54□□□□□ -0.24
PDLIM5-216ENST00000511767 ZNF205O95201 554 aa13.54□□□□□ -0.24
PDLIM5-216ENST00000511767 ALPLP05186 524 aa13.54□□□□□ -0.24
PDLIM5-216ENST00000511767 MRPL3P09001 348 aaKnown RBP13.54□□□□□ -0.24
PDLIM5-216ENST00000511767 SRD5A1P18405 259 aa13.54□□□□□ -0.24
PDLIM5-216ENST00000511767 DCTDP32321 178 aa13.54□□□□□ -0.24
PDLIM5-216ENST00000511767 MDH2P40926 338 aaKnown RBP13.54□□□□□ -0.24
PDLIM5-216ENST00000511767 FAM201AQ5SY85 155 aa13.54□□□□□ -0.24
PDLIM5-216ENST00000511767 FAHD2BQ6P2I3 314 aaPredicted RBP13.54□□□□□ -0.24
PDLIM5-216ENST00000511767 KCTD18Q6PI47 426 aaPredicted RBP13.54□□□□□ -0.24
PDLIM5-216ENST00000511767 C1orf229Q6ZS94 237 aaPredicted RBP13.54□□□□□ -0.24
PDLIM5-216ENST00000511767 KRT77Q7Z794 578 aa13.54□□□□□ -0.24
PDLIM5-216ENST00000511767 KLBQ86Z14 1044 aa13.54□□□□□ -0.24
PDLIM5-216ENST00000511767 C11orf53Q8IXP5 236 aa13.54□□□□□ -0.24
PDLIM5-216ENST00000511767 KLHL36Q8N4N3 616 aa13.54□□□□□ -0.24
PDLIM5-216ENST00000511767 SPICQ8N5J4 248 aa13.54□□□□□ -0.24
PDLIM5-216ENST00000511767 UBE2FQ969M7 185 aa13.54□□□□□ -0.24
PDLIM5-216ENST00000511767 FAHD2AQ96GK7 314 aa13.54□□□□□ -0.24
PDLIM5-216ENST00000511767 RGCCQ9H4X1 137 aa13.54□□□□□ -0.24
PDLIM5-216ENST00000511767 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.54□□□□□ -0.24
PDLIM5-216ENST00000511767 PCDHB10Q9UN67 800 aa13.54□□□□□ -0.24
PDLIM5-216ENST00000511767 LRP12Q9Y561 859 aa13.54□□□□□ -0.24
PDLIM5-216ENST00000511767 TMEM14AQ9Y6G1 99 aa13.54□□□□□ -0.24
PDLIM5-216ENST00000511767 PPIAL4EA0A075B759 164 aa13.53□□□□□ -0.24
PDLIM5-216ENST00000511767 hCG_38984A0A1B0GV85 526 aa13.53□□□□□ -0.24
PDLIM5-216ENST00000511767 SLC22A31A6NKX4 558 aa13.53□□□□□ -0.24
PDLIM5-216ENST00000511767 LRRC30A6NM36 301 aa13.53□□□□□ -0.24
PDLIM5-216ENST00000511767 F5H0A9 414 aaPredicted RBP13.53□□□□□ -0.24
PDLIM5-216ENST00000511767 PPIAL4DF5H284 164 aa13.53□□□□□ -0.24
PDLIM5-216ENST00000511767 PSMD9O00233 223 aa13.53□□□□□ -0.24
PDLIM5-216ENST00000511767 FAM20BO75063 409 aa13.53□□□□□ -0.24
PDLIM5-216ENST00000511767 ZNF254O75437 659 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms