RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, human

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-223	ENST00000511081	C1orf87	Q8N0U7	546 aa		10.16	□□□□□ -0.78
CLDND1-223	ENST00000511081	IQCF1	Q8N6M8	205 aa		10.16	□□□□□ -0.78
CLDND1-223	ENST00000511081	SPERT	Q8NA61	448 aa		10.16	□□□□□ -0.78
CLDND1-223	ENST00000511081	OR6K6	Q8NGW6	343 aa		10.16	□□□□□ -0.78
CLDND1-223	ENST00000511081	OR2AE1	Q8NHA4	323 aa		10.16	□□□□□ -0.78
CLDND1-223	ENST00000511081	NANP	Q8TBE9	248 aa		10.16	□□□□□ -0.78
CLDND1-223	ENST00000511081	SPRYD4	Q8WW59	207 aa	Predicted RBP	10.16	□□□□□ -0.78
CLDND1-223	ENST00000511081	UTP4	Q969X6	686 aa	Known RBP	10.16	□□□□□ -0.78
CLDND1-223	ENST00000511081	SGK3	Q96BR1	496 aa		10.16	□□□□□ -0.78
CLDND1-223	ENST00000511081	INTS14	Q96SY0	518 aa		10.16	□□□□□ -0.78
CLDND1-223	ENST00000511081	TMEM246	Q9BRR3	403 aa		10.16	□□□□□ -0.78
CLDND1-223	ENST00000511081	COPS4	Q9BT78	406 aa		10.16	□□□□□ -0.78
CLDND1-223	ENST00000511081	MIOX	Q9UGB7	285 aa		10.16	□□□□□ -0.78
CLDND1-223	ENST00000511081	LRCH1	Q9Y2L9	728 aa		10.16	□□□□□ -0.78
CLDND1-223	ENST00000511081	INSIG2	Q9Y5U4	225 aa		10.16	□□□□□ -0.78
CLDND1-223	ENST00000511081	NBEAL1	Q6ZS30	2694 aa		10.16	□□□□□ -0.78
CLDND1-223	ENST00000511081	LRRC30	A6NM36	301 aa		10.15	□□□□□ -0.78
CLDND1-223	ENST00000511081	PRODH	O43272	600 aa		10.15	□□□□□ -0.78
CLDND1-223	ENST00000511081	XRCC2	O43543	280 aa		10.15	□□□□□ -0.78
CLDND1-223	ENST00000511081	APOC1	P02654	83 aa		10.15	□□□□□ -0.78
CLDND1-223	ENST00000511081	PPIAL4G	P0DN37	164 aa		10.15	□□□□□ -0.78
CLDND1-223	ENST00000511081	ADRA2C	P18825	462 aa		10.15	□□□□□ -0.78
CLDND1-223	ENST00000511081	EPHA1	P21709	976 aa		10.15	□□□□□ -0.78
CLDND1-223	ENST00000511081	PAICS	P22234	425 aa	Known RBP	10.15	□□□□□ -0.78
CLDND1-223	ENST00000511081	SLC2A5	P22732	501 aa		10.15	□□□□□ -0.78
CLDND1-223	ENST00000511081	CA6	P23280	308 aa		10.15	□□□□□ -0.78
CLDND1-223	ENST00000511081	HILS1	P60008	231 aa		10.15	□□□□□ -0.78
CLDND1-223	ENST00000511081	FAM3A	P98173	230 aa		10.15	□□□□□ -0.78
CLDND1-223	ENST00000511081	EIF2B1	Q14232	305 aa	Known RBP	10.15	□□□□□ -0.78
CLDND1-223	ENST00000511081	TAF13	Q15543	124 aa		10.15	□□□□□ -0.78
CLDND1-223	ENST00000511081	MPPED2	Q15777	294 aa		10.15	□□□□□ -0.78
CLDND1-223	ENST00000511081	FAHD1	Q6P587	224 aa		10.15	□□□□□ -0.78
CLDND1-223	ENST00000511081	SPATA24	Q86W54	205 aa		10.15	□□□□□ -0.78
CLDND1-223	ENST00000511081	OTOS	Q8NHW6	89 aa		10.15	□□□□□ -0.78
CLDND1-223	ENST00000511081	ZNF418	Q8TF45	676 aa	Predicted RBP	10.15	□□□□□ -0.78
CLDND1-223	ENST00000511081	DNAJC9	Q8WXX5	260 aa		10.15	□□□□□ -0.78
CLDND1-223	ENST00000511081	AMELY	Q99218	206 aa		10.15	□□□□□ -0.78
CLDND1-223	ENST00000511081	SP140L	Q9H930	580 aa		10.15	□□□□□ -0.78
CLDND1-223	ENST00000511081	ZNF556	Q9HAH1	456 aa		10.15	□□□□□ -0.78
CLDND1-223	ENST00000511081	SLC25A19	Q9HC21	320 aa		10.15	□□□□□ -0.78
CLDND1-223	ENST00000511081	PPIAL4A	Q9Y536	164 aa		10.15	□□□□□ -0.78
CLDND1-223	ENST00000511081	PRR23D1	E9PI22	279 aa	Predicted RBP	10.14	□□□□□ -0.79
CLDND1-223	ENST00000511081	FAM20B	O75063	409 aa		10.14	□□□□□ -0.79
CLDND1-223	ENST00000511081	E2F6	O75461	281 aa		10.14	□□□□□ -0.79
CLDND1-223	ENST00000511081	LHB	P01229	141 aa		10.14	□□□□□ -0.79
CLDND1-223	ENST00000511081	PRR23D2	P0DMB1	279 aa	Predicted RBP	10.14	□□□□□ -0.79
CLDND1-223	ENST00000511081	SLC2A1	P11166	492 aa		10.14	□□□□□ -0.79
CLDND1-223	ENST00000511081	POU1F1	P28069	291 aa		10.14	□□□□□ -0.79
CLDND1-223	ENST00000511081	CD80	P33681	288 aa		10.14	□□□□□ -0.79
CLDND1-223	ENST00000511081	PSMB10	P40306	273 aa		10.14	□□□□□ -0.79
CLDND1-223	ENST00000511081	EFNB1	P98172	346 aa		10.14	□□□□□ -0.79
CLDND1-223	ENST00000511081	ZNF154	Q13106	437 aa		10.14	□□□□□ -0.79
CLDND1-223	ENST00000511081	OR8G1	Q15617	311 aa		10.14	□□□□□ -0.79
CLDND1-223	ENST00000511081	KLHL12	Q53G59	568 aa		10.14	□□□□□ -0.79
CLDND1-223	ENST00000511081	ESCO2	Q56NI9	601 aa		10.14	□□□□□ -0.79
CLDND1-223	ENST00000511081	KLF17	Q5JT82	389 aa	Predicted RBP	10.14	□□□□□ -0.79
CLDND1-223	ENST00000511081	SLC35D3	Q5M8T2	416 aa		10.14	□□□□□ -0.79
CLDND1-223	ENST00000511081	FAM201A	Q5SY85	155 aa		10.14	□□□□□ -0.79
CLDND1-223	ENST00000511081	PLBD1	Q6P4A8	553 aa		10.14	□□□□□ -0.79
CLDND1-223	ENST00000511081	ZNF841	Q6ZN19	808 aa		10.14	□□□□□ -0.79
CLDND1-223	ENST00000511081	KRT74	Q7RTS7	529 aa		10.14	□□□□□ -0.79
CLDND1-223	ENST00000511081	SLC16A9	Q7RTY1	509 aa		10.14	□□□□□ -0.79
CLDND1-223	ENST00000511081	ERI1	Q8IV48	349 aa	Known RBP	10.14	□□□□□ -0.79
CLDND1-223	ENST00000511081	CPO	Q8IVL8	374 aa		10.14	□□□□□ -0.79
CLDND1-223	ENST00000511081	PARP8	Q8N3A8	854 aa		10.14	□□□□□ -0.79
CLDND1-223	ENST00000511081	OR52H1	Q8NGJ2	320 aa		10.14	□□□□□ -0.79
CLDND1-223	ENST00000511081	OR6N2	Q8NGY6	317 aa		10.14	□□□□□ -0.79
CLDND1-223	ENST00000511081	NEIL1	Q96FI4	390 aa	Predicted RBP	10.14	□□□□□ -0.79
CLDND1-223	ENST00000511081	DUS3L	Q96G46	650 aa	Known RBP	10.14	□□□□□ -0.79
CLDND1-223	ENST00000511081	OR51V1	Q9H2C8	321 aa		10.14	□□□□□ -0.79
CLDND1-223	ENST00000511081	ZNF319	Q9P2F9	582 aa		10.14	□□□□□ -0.79
CLDND1-223	ENST00000511081	RNF7	Q9UBF6	113 aa		10.14	□□□□□ -0.79
CLDND1-223	ENST00000511081	AUP1	Q9Y679	476 aa		10.14	□□□□□ -0.79
CLDND1-223	ENST00000511081	IGHV3-64D	A0A0J9YX35	117 aa		10.13	□□□□□ -0.79
CLDND1-223	ENST00000511081	KIR2DS1	A0A191URI9	304 aa		10.13	□□□□□ -0.79
CLDND1-223	ENST00000511081	GGT3P	A6NGU5	568 aa		10.13	□□□□□ -0.79
CLDND1-223	ENST00000511081	ZNF205	O95201	554 aa		10.13	□□□□□ -0.79
CLDND1-223	ENST00000511081	CFHR2	P36980	270 aa		10.13	□□□□□ -0.79
CLDND1-223	ENST00000511081	CX3CR1	P49238	355 aa		10.13	□□□□□ -0.79
CLDND1-223	ENST00000511081	DAP	P51397	102 aa		10.13	□□□□□ -0.79
CLDND1-223	ENST00000511081	CRISP1	P54107	249 aa		10.13	□□□□□ -0.79
CLDND1-223	ENST00000511081	PRAMEF6	Q5VXH4	476 aa		10.13	□□□□□ -0.79
CLDND1-223	ENST00000511081	LYPD2	Q6UXB3	125 aa		10.13	□□□□□ -0.79
CLDND1-223	ENST00000511081	DCDC5	Q6ZRR9	648 aa		10.13	□□□□□ -0.79
CLDND1-223	ENST00000511081	ZNF771	Q7L3S4	317 aa	Predicted RBP	10.13	□□□□□ -0.79
CLDND1-223	ENST00000511081	C11orf53	Q8IXP5	236 aa		10.13	□□□□□ -0.79
CLDND1-223	ENST00000511081	OR56B2P	Q8NGI1	322 aa		10.13	□□□□□ -0.79
CLDND1-223	ENST00000511081	OR11L1	Q8NGX0	322 aa		10.13	□□□□□ -0.79
CLDND1-223	ENST00000511081	RAB40A	Q8WXH6	277 aa		10.13	□□□□□ -0.79
CLDND1-223	ENST00000511081	ZMYND19	Q96E35	227 aa	Predicted RBP	10.13	□□□□□ -0.79
CLDND1-223	ENST00000511081	PLEKHA8	Q96JA3	519 aa		10.13	□□□□□ -0.79
CLDND1-223	ENST00000511081	TEAD3	Q99594	435 aa		10.13	□□□□□ -0.79
CLDND1-223	ENST00000511081	SSBP3	Q9BWW4	388 aa	Predicted RBP	10.13	□□□□□ -0.79
CLDND1-223	ENST00000511081	MMADHC	Q9H3L0	296 aa	Predicted RBP	10.13	□□□□□ -0.79
CLDND1-223	ENST00000511081	FN3KRP	Q9HA64	309 aa		10.13	□□□□□ -0.79
CLDND1-223	ENST00000511081	hCG_38984	A0A1B0GV85	526 aa		10.12	□□□□□ -0.79
CLDND1-223	ENST00000511081	ATP5H	O75947	161 aa		10.12	□□□□□ -0.79
CLDND1-223	ENST00000511081	LYN	P07948	512 aa		10.12	□□□□□ -0.79
CLDND1-223	ENST00000511081	IRF2	P14316	349 aa		10.12	□□□□□ -0.79
CLDND1-223	ENST00000511081	RPS2	P15880	293 aa	Known RBP	10.12	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms