RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 LRP12Q9Y561 859 aa9.91□□□□□ -0.82
HMGXB3-203ENST00000510472 TMEM14AQ9Y6G1 99 aa9.91□□□□□ -0.82
HMGXB3-203ENST00000510472 YLPM1P49750 1951 aaKnown RBP9.91□□□□□ -0.82
HMGXB3-203ENST00000510472 LOC100289279A0A1B0GTE1 492 aa9.9□□□□□ -0.82
HMGXB3-203ENST00000510472 hCG_38984A0A1B0GV85 526 aa9.9□□□□□ -0.82
HMGXB3-203ENST00000510472 FAM157AC9JC47 383 aa9.9□□□□□ -0.82
HMGXB3-203ENST00000510472 TMEM178BH3BS89 294 aa9.9□□□□□ -0.82
HMGXB3-203ENST00000510472 DLGAP1O14490 977 aa9.9□□□□□ -0.82
HMGXB3-203ENST00000510472 GMDSO60547 372 aa9.9□□□□□ -0.82
HMGXB3-203ENST00000510472 SRSF10O75494 262 aaKnown RBP9.9□□□□□ -0.82
HMGXB3-203ENST00000510472 FSTL3O95633 263 aa9.9□□□□□ -0.82
HMGXB3-203ENST00000510472 TGFAP01135 160 aa9.9□□□□□ -0.82
HMGXB3-203ENST00000510472 IGLV3-1P01715 115 aa9.9□□□□□ -0.82
HMGXB3-203ENST00000510472 IGHV2-70P01814 119 aa9.9□□□□□ -0.82
HMGXB3-203ENST00000510472 ANXA2P07355 339 aaKnown RBP9.9□□□□□ -0.82
HMGXB3-203ENST00000510472 ZNF16P17020 682 aaPredicted RBP9.9□□□□□ -0.82
HMGXB3-203ENST00000510472 GABRB1P18505 474 aa9.9□□□□□ -0.82
HMGXB3-203ENST00000510472 CA6P23280 308 aa9.9□□□□□ -0.82
HMGXB3-203ENST00000510472 CD200P41217 278 aa9.9□□□□□ -0.82
HMGXB3-203ENST00000510472 MMP16P51512 607 aa9.9□□□□□ -0.82
HMGXB3-203ENST00000510472 PSMA6P60900 246 aaKnown RBP9.9□□□□□ -0.82
HMGXB3-203ENST00000510472 CDC42P60953 191 aa9.9□□□□□ -0.82
HMGXB3-203ENST00000510472 OR8B8Q15620 311 aa9.9□□□□□ -0.82
HMGXB3-203ENST00000510472 ZNF181Q2M3W8 571 aa9.9□□□□□ -0.82
HMGXB3-203ENST00000510472 ZIK1Q3SY52 487 aaPredicted RBP9.9□□□□□ -0.82
HMGXB3-203ENST00000510472 ZNF684Q5T5D7 378 aa9.9□□□□□ -0.82
HMGXB3-203ENST00000510472 KCTD18Q6PI47 426 aaPredicted RBP9.9□□□□□ -0.82
HMGXB3-203ENST00000510472 ZBTB49Q6ZSB9 765 aa9.9□□□□□ -0.82
HMGXB3-203ENST00000510472 KRT77Q7Z794 578 aa9.9□□□□□ -0.82
HMGXB3-203ENST00000510472 LRRC28Q86X40 367 aaPredicted RBP9.9□□□□□ -0.82
HMGXB3-203ENST00000510472 KLBQ86Z14 1044 aa9.9□□□□□ -0.82
HMGXB3-203ENST00000510472 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.9□□□□□ -0.82
HMGXB3-203ENST00000510472 RFLNBQ8N5W9 214 aa9.9□□□□□ -0.82
HMGXB3-203ENST00000510472 LINC01356Q8N9X3 169 aa9.9□□□□□ -0.82
HMGXB3-203ENST00000510472 OR56B2PQ8NGI1 322 aa9.9□□□□□ -0.82
HMGXB3-203ENST00000510472 SPRYD4Q8WW59 207 aaPredicted RBP9.9□□□□□ -0.82
HMGXB3-203ENST00000510472 RAB1CQ92928 201 aa9.9□□□□□ -0.82
HMGXB3-203ENST00000510472 REEP6Q96HR9 211 aa9.9□□□□□ -0.82
HMGXB3-203ENST00000510472 LYZL4Q96KX0 146 aa9.9□□□□□ -0.82
HMGXB3-203ENST00000510472 OR10A2Q9H208 303 aa9.9□□□□□ -0.82
HMGXB3-203ENST00000510472 CLN6Q9NWW5 311 aa9.9□□□□□ -0.82
HMGXB3-203ENST00000510472 FAM206AQ9NX38 181 aa9.9□□□□□ -0.82
HMGXB3-203ENST00000510472 DNAJC27Q9NZQ0 273 aa9.9□□□□□ -0.82
HMGXB3-203ENST00000510472 PPP1R3CQ9UQK1 317 aa9.9□□□□□ -0.82
HMGXB3-203ENST00000510472 N6AMT1Q9Y5N5 214 aa9.9□□□□□ -0.82
HMGXB3-203ENST00000510472 NPTNQ9Y639 398 aa9.9□□□□□ -0.82
HMGXB3-203ENST00000510472 GGT3PA6NGU5 568 aa9.89□□□□□ -0.83
HMGXB3-203ENST00000510472 J3QRE1 110 aa9.89□□□□□ -0.83
HMGXB3-203ENST00000510472 IFNL4K9M1U5 179 aa9.89□□□□□ -0.83
HMGXB3-203ENST00000510472 PSMD9O00233 223 aa9.89□□□□□ -0.83
HMGXB3-203ENST00000510472 LMX1BO60663 402 aa9.89□□□□□ -0.83
HMGXB3-203ENST00000510472 PNPP00491 289 aa9.89□□□□□ -0.83
HMGXB3-203ENST00000510472 IGHV2-5P01817 119 aa9.89□□□□□ -0.83
HMGXB3-203ENST00000510472 OR2T7P0C7T2 308 aa9.89□□□□□ -0.83
HMGXB3-203ENST00000510472 CFL1P23528 166 aaKnown RBP9.89□□□□□ -0.83
HMGXB3-203ENST00000510472 SRP9P49458 86 aaKnown RBP9.89□□□□□ -0.83
HMGXB3-203ENST00000510472 GSK3AP49840 483 aa9.89□□□□□ -0.83
HMGXB3-203ENST00000510472 EGR3Q06889 387 aa9.89□□□□□ -0.83
HMGXB3-203ENST00000510472 OCLNQ16625 522 aa9.89□□□□□ -0.83
HMGXB3-203ENST00000510472 ZNF322Q6U7Q0 402 aaPredicted RBP9.89□□□□□ -0.83
HMGXB3-203ENST00000510472 SLC35F2Q8IXU6 374 aa9.89□□□□□ -0.83
HMGXB3-203ENST00000510472 PLPP7Q8NBV4 271 aa9.89□□□□□ -0.83
HMGXB3-203ENST00000510472 OR8B12Q8NGG6 310 aa9.89□□□□□ -0.83
HMGXB3-203ENST00000510472 OR2T27Q8NH04 317 aa9.89□□□□□ -0.83
HMGXB3-203ENST00000510472 RHOXF1Q8NHV9 184 aa9.89□□□□□ -0.83
HMGXB3-203ENST00000510472 Q8TCH9 128 aa9.89□□□□□ -0.83
HMGXB3-203ENST00000510472 ERGIC1Q969X5 290 aa9.89□□□□□ -0.83
HMGXB3-203ENST00000510472 TIMD4Q96H15 378 aa9.89□□□□□ -0.83
HMGXB3-203ENST00000510472 MROQ9BYG7 248 aa9.89□□□□□ -0.83
HMGXB3-203ENST00000510472 ZNF665Q9H7R5 613 aa9.89□□□□□ -0.83
HMGXB3-203ENST00000510472 BRD7Q9NPI1 651 aa9.89□□□□□ -0.83
HMGXB3-203ENST00000510472 MRM2Q9UI43 246 aaKnown RBP9.89□□□□□ -0.83
HMGXB3-203ENST00000510472 JMJD1CQ15652 2540 aa9.88□□□□□ -0.83
HMGXB3-203ENST00000510472 A0A0U1RQV5 110 aa9.88□□□□□ -0.83
HMGXB3-203ENST00000510472 TMEM269A0A1B0GVZ9 245 aa9.88□□□□□ -0.83
HMGXB3-203ENST00000510472 A0A1W2PQL4 384 aaPredicted RBP9.88□□□□□ -0.83
HMGXB3-203ENST00000510472 B4DSR2 109 aa9.88□□□□□ -0.83
HMGXB3-203ENST00000510472 SLC16A6O15403 523 aa9.88□□□□□ -0.83
HMGXB3-203ENST00000510472 MAGEB4O15481 346 aaPredicted RBP9.88□□□□□ -0.83
HMGXB3-203ENST00000510472 TBX1O43435 398 aa9.88□□□□□ -0.83
HMGXB3-203ENST00000510472 ENTPD6O75354 484 aa9.88□□□□□ -0.83
HMGXB3-203ENST00000510472 BAG2O95816 211 aa9.88□□□□□ -0.83
HMGXB3-203ENST00000510472 ACKR3P25106 362 aa9.88□□□□□ -0.83
HMGXB3-203ENST00000510472 DVL1P1P54792 670 aaPredicted RBP9.88□□□□□ -0.83
HMGXB3-203ENST00000510472 CXCR4P61073 352 aa9.88□□□□□ -0.83
HMGXB3-203ENST00000510472 POU4F2Q12837 409 aa9.88□□□□□ -0.83
HMGXB3-203ENST00000510472 ZMYND11Q15326 602 aa9.88□□□□□ -0.83
HMGXB3-203ENST00000510472 MPPED2Q15777 294 aa9.88□□□□□ -0.83
HMGXB3-203ENST00000510472 ZSCAN26Q16670 478 aa9.88□□□□□ -0.83
HMGXB3-203ENST00000510472 TIGD6Q17RP2 521 aa9.88□□□□□ -0.83
HMGXB3-203ENST00000510472 TMEM155Q4W5P6 130 aa9.88□□□□□ -0.83
HMGXB3-203ENST00000510472 FAM166AQ6J272 317 aa9.88□□□□□ -0.83
HMGXB3-203ENST00000510472 SSX6Q7RTT6 188 aa9.88□□□□□ -0.83
HMGXB3-203ENST00000510472 PRIMA1Q86XR5 153 aa9.88□□□□□ -0.83
HMGXB3-203ENST00000510472 SPERTQ8NA61 448 aa9.88□□□□□ -0.83
HMGXB3-203ENST00000510472 OR51G2Q8NGK0 314 aa9.88□□□□□ -0.83
HMGXB3-203ENST00000510472 FAM81AQ8TBF8 368 aa9.88□□□□□ -0.83
HMGXB3-203ENST00000510472 ITFG2Q969R8 447 aa9.88□□□□□ -0.83
HMGXB3-203ENST00000510472 PPP1R14AQ96A00 147 aa9.88□□□□□ -0.83
HMGXB3-203ENST00000510472 PGAM5Q96HS1 289 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms