RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 C12orf10Q9HB07 376 aa3.07□□□□□ -1.92
RNF4-211ENST00000509206 TMEM27Q9HBJ8 222 aa3.07□□□□□ -1.92
RNF4-211ENST00000509206 KCNK9Q9NPC2 374 aa3.07□□□□□ -1.92
RNF4-211ENST00000509206 ZFP57Q9NU63 452 aa3.07□□□□□ -1.92
RNF4-211ENST00000509206 C1orf123Q9NWV4 160 aa3.07□□□□□ -1.92
RNF4-211ENST00000509206 MRPL39Q9NYK5 338 aaKnown RBP3.07□□□□□ -1.92
RNF4-211ENST00000509206 CALML5Q9NZT1 146 aa3.07□□□□□ -1.92
RNF4-211ENST00000509206 IFT52Q9Y366 437 aa3.07□□□□□ -1.92
RNF4-211ENST00000509206 NOP16Q9Y3C1 178 aaKnown RBP3.07□□□□□ -1.92
RNF4-211ENST00000509206 FRAS1Q86XX4 4008 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 CXorf65A6NEN9 183 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 PRSS29PA6NIE9 313 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 NKX6-3A6NJ46 265 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 C12orf71A8MTZ7 269 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 PRR23D1E9PI22 279 aaPredicted RBP3.06□□□□□ -1.92
RNF4-211ENST00000509206 BLOC1S5-TXNDC5H3BN57 136 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 H3BSH0 61 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 HMGN4O00479 90 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 MLNRO43193 412 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 DOK2O60496 412 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 FMO6PO60774 539 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 MT-ATP6P00846 226 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 BGLAPP02818 100 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 GRPP07492 148 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 VIMP08670 466 aaKnown RBP3.06□□□□□ -1.92
RNF4-211ENST00000509206 CST2P09228 141 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 PGA4P0DJD7 388 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 PGA3P0DJD8 388 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 PRR23D2P0DMB1 279 aaPredicted RBP3.06□□□□□ -1.92
RNF4-211ENST00000509206 MYL2P10916 166 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 AZGP1P25311 298 aaKnown RBP3.06□□□□□ -1.92
RNF4-211ENST00000509206 LAP3P28838 519 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 GRK5P34947 590 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 POU3F4P49335 361 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 ERFP50548 548 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 INSL3P51460 131 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 CRISP3P54108 245 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 PLTPP55058 493 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 OR12D2P58182 307 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 RPS16P62249 146 aaKnown RBP3.06□□□□□ -1.92
RNF4-211ENST00000509206 SLC35B1P78383 322 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 TXNL4AP83876 142 aaKnown RBP3.06□□□□□ -1.92
RNF4-211ENST00000509206 SLC34A1Q06495 639 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 CD47Q08722 323 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 SCRN3Q0VDG4 424 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 FUT5Q11128 374 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 RAB32Q13637 225 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 MPPED2Q15777 294 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 SSX2Q16385 188 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 SRSF7Q16629 238 aaKnown RBP eCLIP3.06□□□□□ -1.92
RNF4-211ENST00000509206 ABCA11PQ4W5N1 156 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 CLEC12AQ5QGZ9 265 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 FAM27BQ5VT28 67 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 FAM91A1Q658Y4 838 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 PLBD1Q6P4A8 553 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 LCNL1Q6ZST4 164 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 OR2W3Q7Z3T1 314 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 ZNF329Q86UD4 541 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 ANKRD46Q86W74 232 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 C10orf107Q8IVU9 208 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 ZNF695Q8IW36 515 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 SGPP2Q8IWX5 399 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 FAM185AQ8N0U4 392 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 CCDC63Q8NA47 563 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 FNDC5Q8NAU1 212 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 OR8U1Q8NH10 309 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 PIFOQ8TCI5 191 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 ACOT11Q8WXI4 607 aaPredicted RBP3.06□□□□□ -1.92
RNF4-211ENST00000509206 TNFRSF14Q92956 283 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 ST6GALNAC6Q969X2 333 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 DUS3LQ96G46 650 aaKnown RBP3.06□□□□□ -1.92
RNF4-211ENST00000509206 MED30Q96HR3 178 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 TEX37Q96LM6 180 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 MUC4Q99102 2169 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 P2RX4Q99571 388 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 NAPGQ99747 312 aaPredicted RBP3.06□□□□□ -1.92
RNF4-211ENST00000509206 C1orf50Q9BV19 199 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 SLC22A4Q9H015 551 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 WNT5BQ9H1J7 359 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 SLC38A1Q9H2H9 487 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 GSTO2Q9H4Y5 243 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 SMURF2Q9HAU4 748 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 MRPL15Q9P015 296 aaKnown RBP3.06□□□□□ -1.92
RNF4-211ENST00000509206 TMEM216Q9P0N5 145 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 STX18Q9P2W9 335 aaKnown RBP3.06□□□□□ -1.92
RNF4-211ENST00000509206 KAAG1Q9UBP8 84 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 SLC13A4Q9UKG4 626 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 PRPF19Q9UMS4 504 aaKnown RBP3.06□□□□□ -1.92
RNF4-211ENST00000509206 OAZ3Q9UMX2 235 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 ZNF443Q9Y2A4 671 aaPredicted RBP3.06□□□□□ -1.92
RNF4-211ENST00000509206 CCL27Q9Y4X3 112 aa3.06□□□□□ -1.92
RNF4-211ENST00000509206 SIRT4Q9Y6E7 314 aaPredicted RBP3.06□□□□□ -1.92
RNF4-211ENST00000509206 DNAH10Q8IVF4 4471 aa3.05□□□□□ -1.92
RNF4-211ENST00000509206 ALMS1Q8TCU4 4167 aa3.05□□□□□ -1.92
RNF4-211ENST00000509206 PRSS51A0A1B0GVH4 220 aa3.05□□□□□ -1.92
RNF4-211ENST00000509206 A0A1B0GWA3 101 aa3.05□□□□□ -1.92
RNF4-211ENST00000509206 ZNF785A8K8V0 405 aa3.05□□□□□ -1.92
RNF4-211ENST00000509206 VGLL3A8MV65 326 aa3.05□□□□□ -1.92
RNF4-211ENST00000509206 IQCF6A8MYZ5 107 aa3.05□□□□□ -1.92
RNF4-211ENST00000509206 CENPBD1B2RD01 187 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms